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Aliases for CSPG4P11 Gene

Aliases for CSPG4P11 Gene

  • Chondroitin Sulfate Proteoglycan 4 Pseudogene 11 2 3 5

External Ids for CSPG4P11 Gene

Previous GeneCards Identifiers for CSPG4P11 Gene

  • GC15P084858

Summaries for CSPG4P11 Gene

GeneCards Summary for CSPG4P11 Gene

CSPG4P11 (Chondroitin Sulfate Proteoglycan 4 Pseudogene 11) is a Pseudogene.

Additional gene information for CSPG4P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSPG4P11 Gene

Genomics for CSPG4P11 Gene

Regulatory Elements for CSPG4P11 Gene

Enhancers for CSPG4P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H084714 1.4 ENCODE dbSUPER 12.1 +529.2 529210 3.4 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZBTB7B YY1 SCAND2P GOLGA6L5P WDR73 NMB GOLGA6L4 LINC00933 UBE2Q2P1 CSPG4P12 GOLGA6L3 LOC103171574
GH15H084832 1.4 Ensembl ENCODE dbSUPER 10.5 +651.2 651205 10.4 FOXA2 PKNOX1 ATF1 THRB RAD21 YY1 GLIS2 FOS ATF7 CREM NMB ALPK3 ZNF592 GOLGA6L5P GOLGA6L4 LINC00933 CSPG4P11 WDR73 SCAND2P ENSG00000259683
GH15H083446 1.2 ENCODE dbSUPER 10.4 -739.6 -739563 1.5 ATF1 SIN3A ZNF2 ZBTB7B GLIS2 FOS ZNF202 SP3 REST SMARCB1 GOLGA6L4 C15orf40 WHAMM SNHG21 FAM103A1 LOC103171574 CSPG4P11 SH3GL3 GOLGA2P7 GC15M083457
GH15H084999 1.2 Ensembl ENCODE dbSUPER 10.4 +813.8 813818 1.3 FOXA2 MAX ZNF16 REST RAD21 FOXA1 NR2F2 GABPA JUND PRDM6 GOLGA6L5P GOLGA6L4 LINC00933 GOLGA6L3 UBE2Q2P1 WDR73 LOC103171574 CSPG4P11 SCAND2P AKAP13
GH15H084910 2 FANTOM5 Ensembl ENCODE dbSUPER 5.8 +726.6 726594 5.3 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B GOLGA2P7 CSPG4P11 LOC103171574 LINC00933 GOLGA6L3 SLC28A1 GC15M084891 GC15M084941 RNU6-339P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CSPG4P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CSPG4P11 Gene

Genomic Locations for CSPG4P11 Gene
chr15:84,186,752-84,197,384
(GRCh38/hg38)
Size:
10,633 bases
Orientation:
Plus strand
chr15:84,855,504-84,866,136
(GRCh37/hg19)

Genomic View for CSPG4P11 Gene

Genes around CSPG4P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSPG4P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSPG4P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSPG4P11 Gene

Proteins for CSPG4P11 Gene

Post-translational modifications for CSPG4P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSPG4P11 Gene

Domains & Families for CSPG4P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSPG4P11 Gene

Function for CSPG4P11 Gene

Phenotypes From GWAS Catalog for CSPG4P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSPG4P11 Gene

Localization for CSPG4P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CSPG4P11 Gene

Pathways & Interactions for CSPG4P11 Gene

SuperPathways for CSPG4P11 Gene

No Data Available

Interacting Proteins for CSPG4P11 Gene

Gene Ontology (GO) - Biological Process for CSPG4P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSPG4P11 Gene

Drugs & Compounds for CSPG4P11 Gene

No Compound Related Data Available

Transcripts for CSPG4P11 Gene

mRNA/cDNA for CSPG4P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CSPG4P11 Gene

No ASD Table

Relevant External Links for CSPG4P11 Gene

GeneLoc Exon Structure for
CSPG4P11
ECgene alternative splicing isoforms for
CSPG4P11

Expression for CSPG4P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CSPG4P11 Gene

mRNA differential expression in normal tissues according to GTEx for CSPG4P11 Gene

This gene is overexpressed in Ovary (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of CSPG4P11 Gene:

CSPG4P11
genes like me logo Genes that share expression patterns with CSPG4P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CSPG4P11 Gene

Orthologs for CSPG4P11 Gene

Evolution for CSPG4P11 Gene

ENSEMBL:
Gene Tree for CSPG4P11 (if available)
TreeFam:
Gene Tree for CSPG4P11 (if available)

No data available for Orthologs for CSPG4P11 Gene

Paralogs for CSPG4P11 Gene

No data available for Paralogs for CSPG4P11 Gene

Variants for CSPG4P11 Gene

Relevant External Links for CSPG4P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSPG4P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSPG4P11 Gene

Disorders for CSPG4P11 Gene

No disorders were found for CSPG4P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CSPG4P11 Gene

Publications for CSPG4P11 Gene

No publications were found for CSPG4P11 Gene.

Products for CSPG4P11 Gene

Sources for CSPG4P11 Gene

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