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Aliases for CSNK1A1P2 Gene

Subcategory (RNA class) for CSNK1A1P2 Gene

lncRNA

Aliases for CSNK1A1P2 Gene

  • Casein Kinase 1 Alpha 1 Pseudogene 2 2 3
  • Casein Kinase 1, Alpha 1 Pseudogene 2 2
  • AP000619.2 5

External Ids for CSNK1A1P2 Gene

ORGUL Members for CSNK1A1P2 Gene

Previous GeneCards Identifiers for CSNK1A1P2 Gene

  • GC11M102678
  • GC11M098605
  • GC11M102682
  • GC11M102684

Summaries for CSNK1A1P2 Gene

GeneCards Summary for CSNK1A1P2 Gene

CSNK1A1P2 (Casein Kinase 1 Alpha 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CSNK1A1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSNK1A1P2 Gene

Genomics for CSNK1A1P2 Gene

Regulatory Elements for CSNK1A1P2 Gene

Enhancers for CSNK1A1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H102797 1.1 FANTOM5 Ensembl ENCODE 0.4 +8.1 8090 5 JUND POLR2A MAX CEBPB FOS MMP1 MMP27 CSNK1A1P2
GH11H102808 0.6 ENCODE 0.7 +0.2 182 0 CTCF TFAP4 RFX1 USF2 RAD21 ZBTB40 GABPA SMC3 ZNF143 CSNK1A1P2 MMP1
GH11H102807 0.5 FANTOM5 0.7 +0.6 624 0 CTCF GABPA MMP1 CSNK1A1P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CSNK1A1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CSNK1A1P2 Gene

Chromosome:
11
Start:
102,806,948 bp from pter
End:
102,808,326 bp from pter
Size:
1,379 bases
Orientation:
Minus strand

Genomic View for CSNK1A1P2 Gene

Genes around CSNK1A1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSNK1A1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSNK1A1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSNK1A1P2 Gene

Proteins for CSNK1A1P2 Gene

Post-translational modifications for CSNK1A1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSNK1A1P2 Gene

Domains & Families for CSNK1A1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSNK1A1P2 Gene

Function for CSNK1A1P2 Gene

Phenotypes From GWAS Catalog for CSNK1A1P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CSNK1A1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSNK1A1P2 Gene

Localization for CSNK1A1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CSNK1A1P2 Gene

Pathways & Interactions for CSNK1A1P2 Gene

SuperPathways for CSNK1A1P2 Gene

No Data Available

Interacting Proteins for CSNK1A1P2 Gene

Gene Ontology (GO) - Biological Process for CSNK1A1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSNK1A1P2 Gene

Drugs & Compounds for CSNK1A1P2 Gene

No Compound Related Data Available

Transcripts for CSNK1A1P2 Gene

mRNA/cDNA for CSNK1A1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CSNK1A1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CSNK1A1P2 Gene

No ASD Table

Relevant External Links for CSNK1A1P2 Gene

GeneLoc Exon Structure for
CSNK1A1P2
ECgene alternative splicing isoforms for
CSNK1A1P2

Expression for CSNK1A1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CSNK1A1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CSNK1A1P2 Gene:

CSNK1A1P2
genes like me logo Genes that share expression patterns with CSNK1A1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CSNK1A1P2 Gene

Orthologs for CSNK1A1P2 Gene

Evolution for CSNK1A1P2 Gene

ENSEMBL:
Gene Tree for CSNK1A1P2 (if available)
TreeFam:
Gene Tree for CSNK1A1P2 (if available)

No data available for Orthologs for CSNK1A1P2 Gene

Paralogs for CSNK1A1P2 Gene

No data available for Paralogs for CSNK1A1P2 Gene

Variants for CSNK1A1P2 Gene

Relevant External Links for CSNK1A1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSNK1A1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSNK1A1P2 Gene

Disorders for CSNK1A1P2 Gene

Relevant External Links for CSNK1A1P2

Genetic Association Database (GAD)
CSNK1A1P2

No disorders were found for CSNK1A1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CSNK1A1P2 Gene

Publications for CSNK1A1P2 Gene

  1. Genome-wide association scan identifies variants near Matrix Metalloproteinase (MMP) genes on chromosome 11q21-22 strongly associated with serum MMP-1 levels. (PMID: 20031604) Cheng YC … Pollin TI (Circulation. Cardiovascular genetics 2009) 3 45 60

Products for CSNK1A1P2 Gene

Sources for CSNK1A1P2 Gene

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