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Aliases for CSNK1A1P1 Gene

Aliases for CSNK1A1P1 Gene

  • Casein Kinase 1 Alpha 1 Pseudogene 1 2 3 5
  • Casein Kinase 1, Alpha 1 Pseudogene 2 3
  • Casein Kinase 1, Alpha 1 Pseudogene 1 2
  • Casein Kinase I Alpha-Like Pseudogene 3
  • CSNK1A1P 3

External Ids for CSNK1A1P1 Gene

Previous HGNC Symbols for CSNK1A1P1 Gene

  • CSNK1A1P

Previous GeneCards Identifiers for CSNK1A1P1 Gene

  • GC15M037092

Summaries for CSNK1A1P1 Gene

GeneCards Summary for CSNK1A1P1 Gene

CSNK1A1P1 (Casein Kinase 1 Alpha 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSNK1A1P1 Gene

Genomics for CSNK1A1P1 Gene

Regulatory Elements for CSNK1A1P1 Gene

Enhancers for CSNK1A1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F036817 0.2 ENCODE 0.8 +0.2 152 0.8 PKNOX1 SUZ12 ZFP64 SIN3A YY1 ZNF335 POLR2A PRDM10 ZBTB20 EZH2 CSNK1A1P1 PIR45747
GH15F036830 0.5 ENCODE 0.4 -13.8 -13844 3.1 PKNOX1 MTA2 TAL1 BHLHE40 SIN3A JUNB RAD21 RELA JUND PBX2 CSNK1A1P1 GC15P036853
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CSNK1A1P1 on UCSC Golden Path with GeneCards custom track

Promoters for CSNK1A1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000236520 6 201 PKNOX1 SUZ12 RNF2 ZFP64 BHLHE40 NRF1 YY1 KAT8 TGIF2 ZNF335

Genomic Location for CSNK1A1P1 Gene

Chromosome:
15
Start:
36,798,596 bp from pter
End:
36,818,506 bp from pter
Size:
19,911 bases
Orientation:
Minus strand

Genomic View for CSNK1A1P1 Gene

Genes around CSNK1A1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSNK1A1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSNK1A1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSNK1A1P1 Gene

Proteins for CSNK1A1P1 Gene

Post-translational modifications for CSNK1A1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSNK1A1P1 Gene

Domains & Families for CSNK1A1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSNK1A1P1 Gene

Function for CSNK1A1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSNK1A1P1 Gene

Localization for CSNK1A1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CSNK1A1P1 Gene

Pathways & Interactions for CSNK1A1P1 Gene

SuperPathways for CSNK1A1P1 Gene

No Data Available

Interacting Proteins for CSNK1A1P1 Gene

Gene Ontology (GO) - Biological Process for CSNK1A1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSNK1A1P1 Gene

Transcripts for CSNK1A1P1 Gene

mRNA/cDNA for CSNK1A1P1 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CSNK1A1P1 Gene

Casein kinase 1, alpha 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CSNK1A1P1 Gene

No ASD Table

Relevant External Links for CSNK1A1P1 Gene

GeneLoc Exon Structure for
CSNK1A1P1
ECgene alternative splicing isoforms for
CSNK1A1P1

Expression for CSNK1A1P1 Gene

mRNA expression in normal human tissues for CSNK1A1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CSNK1A1P1 Gene

This gene is overexpressed in Testis (x31.1).

NURSA nuclear receptor signaling pathways regulating expression of CSNK1A1P1 Gene:

CSNK1A1P1

SOURCE GeneReport for Unigene cluster for CSNK1A1P1 Gene:

Hs.659822
genes like me logo Genes that share expression patterns with CSNK1A1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CSNK1A1P1 Gene

Orthologs for CSNK1A1P1 Gene

Evolution for CSNK1A1P1 Gene

ENSEMBL:
Gene Tree for CSNK1A1P1 (if available)
TreeFam:
Gene Tree for CSNK1A1P1 (if available)

No data available for Orthologs for CSNK1A1P1 Gene

Paralogs for CSNK1A1P1 Gene

No data available for Paralogs for CSNK1A1P1 Gene

Variants for CSNK1A1P1 Gene

Sequence variations from dbSNP and Humsavar for CSNK1A1P1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1015943 -- 36,809,587(-) TTCCC(A/G)AAAGA intron-variant, nc-transcript-variant, utr-variant-3-prime
rs10518908 -- 36,819,408(+) AATAC(A/C)TCATA upstream-variant-2KB
rs10577250 -- 36,799,233(+) GTACT(-/TAAG)TAAGT intron-variant, nc-transcript-variant
rs11073201 -- 36,800,881(+) TATAT(A/G)TGTGT intron-variant
rs111477096 -- 36,804,817(+) ACAGG(C/T)GAGCA intron-variant, downstream-variant-500B

Relevant External Links for CSNK1A1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSNK1A1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSNK1A1P1 Gene

Disorders for CSNK1A1P1 Gene

Relevant External Links for CSNK1A1P1

Genetic Association Database (GAD)
CSNK1A1P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CSNK1A1P1

No disorders were found for CSNK1A1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CSNK1A1P1 Gene

Publications for CSNK1A1P1 Gene

  1. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CSNK1A1P1 Gene

Sources for CSNK1A1P1 Gene

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