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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CSF3R Gene

protein-coding   GIFtS: 65
GCID: GC01M036931

colony stimulating factor 3 receptor (granulocyte)


(Previous symbol: CD114)
 Explore 47 diseases affiliated with
CSF3R via our new
 Human Malady Compendium 
Biological research products
for CSF3R
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Colony Stimulating Factor 3 Receptor (Granulocyte)1 2     CD114 Antigen2 3
GCSFR1 2 3 5     G-CSF Receptor2 3
CD1141 2     Granulocyte Colony-Stimulating Factor Receptor2
G-CSF-R2 3     

External Ids:    HGNC: 24391   Entrez Gene: 14412   Ensembl: ENSG000001195357   OMIM: 1389715   UniProtKB: Q990623   

Export aliases for CSF3R gene to outside databases

Previous GC identifers: GC01M036753 GC01M035986 GC01M036359 GC01M036600 GC01M036704 GC01M035048


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CSF3R:
The protein encoded by this gene is the receptor for colony stimulating factor 3, a cytokine that controls the
production, differentiation, and function of granulocytes. The encoded protein, which is a member of the family of
cytokine receptors, may also function in some cell surface adhesion or recognition processes. Alternatively spliced
transcript variants have been described. Mutations in this gene are a cause of Kostmann syndrome, also known as severe
congenital neutropenia. (provided by RefSeq, Aug 2010)

UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062
Function: Receptor for granulocyte colony-stimulating factor (CSF3), essential for granulocytic maturation. Plays a
crucial role in the proliferation, differientation and survival of cells along the neutrophilic lineage. In addition
it may function in some adhesion or recognition events at the cell surface

Gene Wiki entry for CSF3R (Granulocyte colony-stimulating factor receptor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_032977.9  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CSF3R gene promoter:
         AML1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCSF3R promoter sequence
   Search SABiosciences Chromatin IP Primers for CSF3R

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CSF3R


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p35-p34.3   Ensembl cytogenetic band:  1p34.3   HGNC cytogenetic band: 1p35-p34.3

CSF3R Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CSF3R gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M036931:  view genomic region     (about GC identifiers)

Start:
36,931,644 bp from pter      End:
36,948,915 bp from pter
Size:
17,272 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062 (See protein sequence)
Recommended Name: Granulocyte colony-stimulating factor receptor precursor  
Size: 836 amino acids; 92156 Da
Subunit: Homodimer. The dimeric receptor binds two CSF3 molecules
Subcellular location: Isoform 2: Secreted (Probable)
Subcellular location: Cell membrane; Single-pass type I membrane protein
Miscellaneous: Mutations in CSF3R acquired in multipotent hematopoietic progenitor cells and resulting in truncated
hyper-responsive forms of the receptor, have been identified in most cases of severe congenital neutropenia (SCN).
Patients carrying these mutations are at risk for developing myelodysplastic syndromes and/or acute myeloid leukemia.
Constitutive mutations leading to hyporesponsive forms of the receptor are responsible for the refractoriness to CSF3
treatment observed in some SCN patients
2 PDB 3D structures from and Proteopedia for CSF3R:
1AZ7 (3D)        2D9Q (3D)    
Alternative splicing: 4 isoforms:  Q99062-1   Q99062-2   Q99062-3   Q99062-4   

Explore the universe of human proteins at neXtProt for CSF3R: NX_Q99062

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q99062

  • CSF3R Protein expression data from MOPED and PaxDb: --
    REFSEQ proteins (3 alternative transcripts): 
    NP_000751.1  NP_724781.1  NP_758519.1  

    ENSEMBL proteins: 
     ENSP00000362198   ENSP00000362196   ENSP00000362195   ENSP00000435218   ENSP00000431639  
     ENSP00000332180   ENSP00000355406   ENSP00000401588   ENSP00000397568   ENSP00000345013  

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    Uscn Proteins for CSF3R

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region IEA--
    GO:0005887integral to plasma membrane TAS7542747
    GO:0016020membrane ----


    CSF3R for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CSF3R for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR003961 Fibronectin_type3
     IPR013783 Ig-like_fold
     IPR010457 IgC2-like_lig-bd
     IPR003529 Hematopoietin_rcpt_Gp130_CS

    Graphical View of Domain Structure for InterPro Entry Q99062

    ProtoNet protein and cluster: Q99062

    2 Blocks protein families:
    IPB003529 Long hematopoietin receptor
    IPB010457 Ig-like C2-type


    UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062
    Domain: The WSXWS motif appears to be necessary for proper protein folding and thereby efficient intracellular
    transport and cell-surface receptor binding
    Domain: The box 1 motif is required for JAK interaction and/or activation
    Similarity: Belongs to the type I cytokine receptor family. Type 2 subfamily
    Similarity: Contains 5 fibronectin type-III domains
    Similarity: Contains 1 Ig-like C2-type (immunoglobulin-like) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062
    Function: Receptor for granulocyte colony-stimulating factor (CSF3), essential for granulocytic maturation. Plays a
    crucial role in the proliferation, differientation and survival of cells along the neutrophilic lineage. In addition
    it may function in some adhesion or recognition events at the cell surface

         Genatlas biochemistry entry for CSF3R:
    colony stimulating factor 3 (granulocyte) receptor,also expressed in endothelial cells,20-25kDa,with an extended form
    expressed in the placenta and a soluble form

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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity TAS7542747
    GO:0004896cytokine receptor activity IEA--


    CSF3R for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for CSF3R:
     Upregulation of Wnt/beta-caten 

    Animal Models:
         Mouse knock-outs for CSF3R: Csf3rtm2Eur Csf3rtm1Link
         3 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Csf3r):
     cellular  hematopoietic system  immune system 

    CSF3R for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Akt Signaling
    Akt Signaling1.00
    Tec Kinases Signaling0.55
    p38 Signaling0.60
    2PEDF Induced Signaling
    STAT3 Pathway0.47
    Cytokine-cytokine receptor interaction0.26
    3Selected targets of C/EBPalpha
    Selected targets of C/EBPalpha1.00
    4Pathways in cancer
    Pathways in cancer1.00
    5Hematopoietic cell lineage
    Hematopoietic cell lineage1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for CSF3R
        Selected targets of C/EBPalpha

    5/6 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CSF3R (see all 6)
        STAT3 Pathway
    Molecular Mechanisms of Cancer
    Antioxidant Action of Vitamin-C
    p38 Signaling
    Akt Signaling


    4         Kegg Pathways  (Kegg details for CSF3R):
        Cytokine-cytokine receptor interaction
    Jak-STAT signaling pathway
    Hematopoietic cell lineage
    Pathways in cancer


    CSF3R for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CSF3R

    5/24 Interacting proteins for CSF3R (Q990622, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 24)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    STAT3P407632, 3MINT-8037913 MINT-8037928 MINT-8035782 MINT-8035767 I2D: score=3 
    UBCP0CG482, 3MINT-4787430 MINT-4787410 I2D: score=2 
    GRB2P629933I2D: score=4 
    HCKP086313I2D: score=4 
    SHC1P293533I2D: score=4 
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006952defense response TAS7542747
    GO:0007155cell adhesion IEA--
    GO:0007165signal transduction NAS1371413
    GO:0030593neutrophil chemotaxis IEA--
    GO:0042475odontogenesis of dentin-containing tooth IEA--


    CSF3R for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CSF3R for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for CSF3R

    2 DrugBank Compounds for CSF3R    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    PegfilgrastimG-CSF (see all 4)208265-92-3targetagonist16033816 12944913 15082029 17127322 17001306 15949269
    FilgrastimG-CSF (see all 4)143011-72-7target--17127322 17001306 16033816 15949269 17494858

    10/29 Novoseek chemical compound relationships for CSF3R gene (see all 29)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    gp 130 68.8 24 8264582 (2), 10092661 (2), 8608222 (1), 11098061 (1) (see all 12)
    filgrastim 61.4 13 16492764 (3), 10537111 (1), 11944966 (1), 12488547 (1) (see all 6)
    tyrosine 61.2 93 7489718 (5), 16033816 (4), 9015216 (4), 8547634 (3) (see all 48)
    phosphotyrosine 42.4 4 15470047 (1), 16493051 (1)
    retinoic acid 32.1 6 14604978 (1), 7506564 (1), 7543855 (1), 11023524 (1) (see all 5)
    methylcellulose 30.1 2 11911419 (1), 10848795 (1)
    thymidine 22.8 3 9529133 (1), 10942233 (1), 9590146 (1)
    nitroblue tetrazolium 13.2 2 10339483 (1)
    imatinib 11.5 1 17453242 (1)
    dmso 7.39 2 7506564 (1)

    Search CenterWatch for drugs/clinical trials and news about CSF3R 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CSF3R gene (4 alternative transcripts): 
    NM_000760.3  NM_156039.3  NM_172313.2  NM_156038.2  

    Unigene Cluster for CSF3R:

    Colony stimulating factor 3 receptor (granulocyte)
    Hs.524517  [show with all ESTs]
    Unigene Representative Sequence: NM_156039
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000373106(uc001caw.2) ENST00000373104(uc001cav.2) ENST00000373103(uc001cax.2)
    ENST00000480825 ENST00000464465 ENST00000487540 ENST00000484762 ENST00000466138
    ENST00000464365 ENST00000469380 ENST00000526980 ENST00000489551 ENST00000533491
    ENST00000331941 ENST00000361632 ENST00000418048 ENST00000440588 ENST00000338937


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    Additional cDNA sequence: 

    AK307242.1 BC040954.1 BC053585.1 DQ424902.1 M59818.1 M59819.1 M59820.1 X55720.1 
    X55721.1 

    22 DOTS entries:

    DT.95220087  DT.100846008  DT.451746  DT.100771102  DT.97837491  DT.100846007  DT.91906674  DT.92444513 
    DT.100706714  DT.100724927  DT.91762962  DT.95073863  DT.100845991  DT.215266  DT.100845989  DT.100846001 
    DT.95189922  DT.97818367  DT.91795491  DT.92444511  DT.95220114  DT.95220162 

    24/227 AceView cDNA sequences (see all 227):

    BQ012336 CR610771 CF530034 CR612645 BM769186 BX397385 BC053585 BI058813 
    BE278866 AA458507 BQ013323 NM_000760 BQ706733 AA477494 BI058814 NM_172313 
    CB960322 BX380592 BX356400 M59818 CR612729 BQ010933 BC040954 AI219619 

    GeneLoc Exon Structure

    5/11 Alternative Splicing Database (ASD) splice patterns (SP) for CSF3R (see all 11)    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c ^ 13a · 13b ^ 14a · 14b ^ 15 ^ 16a · 16b · 16c · 16d ^ 17a ·
    SP1:              -                                                                                   -                             -           -     -         
    SP2:              -                                                                                   -                                                         
    SP3:              -                                                                                   -                             -                           
    SP4:              -                                                                                   -           -     -           -                           
    SP5:                                                                                                                                                            

    ExUns: 17b
    SP1:      
    SP2:      
    SP3:      
    SP4:      
    SP5:      


    ECgene alternative splicing isoforms for CSF3R

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CSF3R expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTCCATCCAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    CSF3R expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    Syncytiotrophoblast-like cells (Generation of syncyt...)
    Posterior foregut-like cells (A scalable, suspensi...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    Genevestigator expression for CSF3R

    SOURCE GeneReport for Unigene cluster: Hs.524517

    UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062
    Tissue specificity: One or several isoforms have been found in myelogenous leukemia cell line KG-1, leukemia U-937 cell
    line, in bone marrow cells, placenta, and peripheral blood granulocytes. Isoform GCSFR-2 is found only in leukemia
    U-937 cells. Isoform GCSFR-3 is highly expressed in placenta

        SABiosciences Expression via Pathway-Focused PCR Arrays including CSF3R: 
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              Inflammatory Response & Autoimmunity 384HT in human mouse rat
              Allergy & Asthma in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CSF3R

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for CSF3R gene from 3/10 species (see all 10)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CSF3R1 colony stimulating factor 3 receptor (granulocyte) 52.79(n)
    39.14(a)
      419620  NM_001030898.1  NP_001026069.1 
    lizard
    (Anolis carolinensis)
    Reptilia CSF3R6
    --
    33(a)
    1 ↔ 1
    GL343610.1(286781-306880)
    zebrafish
    (Danio rerio)
    Actinopterygii csf3r1 colony stimulating factor 3 receptor (granulocyte) 42.84(n)
    30.41(a)
      100134935  NM_001113377.1  NP_001106848.1 


    ENSEMBL Gene Tree for CSF3R (if available)
    TreeFam Gene Tree for CSF3R (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CSF3R gene
    OSMR2  IL6ST2  IL31RA2  IL27RA2  LIFR2  IL12RB22  

    CSF3R for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/434 NCBI SNPs in CSF3R are shown (see all 434    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1219184261,2
    C,F,pathogenic47487231(-) GCTCAA/C/TCTGCC 9 N T I mis11NA 4484
    rs39180031,2
    C,F,H,--35047938(-) CTTAGG/AGCACA 3 -- ds500125Minor allele frequency- A:0.08NS EA NA WA 2784
    rs2005599461,2
    C--35048062(+) AGGAGA/GGNNNN 3 -- ds50010--------
    rs1140265401,2
    C,F,--35049215(+) AGGGAG/AGTGAC 3 -- int11Minor allele frequency- A:0.03WA 118
    rs39180001,2
    C,F,--35049661(-) TCCAGA/GTGGGC 3 -- int115Minor allele frequency- G:0.18NS NA WA CSA 1917
    rs39179991,2
    C,F,--35049882(-) TGGTCG/AGAGGG 3 -- int1 trp312Minor allele frequency- A:0.04NS NA WA EA 984
    rs39179971,2
    C,F,H--35050105(-) CCTCCC/TGTGGC 6 R C mis1 ese310Minor allele frequency- T:0.01NS EA NA 862
    rs1138469301,2
    C--35050240(+) ACTCAG/CAGAAG 3 -- spd11Minor allele frequency- C:0.00CSA 1
    rs39179951,2
    C,F,--35050677(-) AAATTC/TGGAGA 3 -- int13Minor allele frequency- T:0.03NS WA 212
    rs39179941,2
    C,F,--35050689(-) AGGACC/TTGGCA 3 -- int13Minor allele frequency- T:0.03NS WA 212

    HapMap Linkage Disequilibrium report for CSF3R (36931644 - 36948915 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CSF3R: --
    Human Gene Mutation Database (HGMD): CSF3R

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CSF3R
    DNA2.0 Custom Variant and Variant Library Synthesis for CSF3R

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CSF3R for disorders           About GeneDecksing

    OMIM gene information: 138971   
    OMIM disorders: 162830  
    UniProtKB/Swiss-Prot: CSF3R_HUMAN, Q99062
  • Defects in CSF3R are the cause of hereditary neutrophilia (NEUTROPHILIA) [MIM:162830]. A form of lifelong,
  • persistent neutrophilia, a condition characterized by an increase in the number of neutrophils in the blood

    20/47 diseases for CSF3R (see all 47):    About MalaCards
    severe congenital neutropenia    neutropenia    pulmonary alveolar proteinosis    neutrophilia, hereditary
    polycythemia vera    chronic neutrophilic leukemia    myeloid leukemia    myeloproliferative disorder
    monocytic leukemia    leukemia    polycythemia    lymphoblastic leukemia
    lymphocytic leukemia    acute promyelocytic leukemia    aplastic anemia    diphtheria
    myelodysplastic syndrome    transitional cell carcinoma    acute lymphoblastic leukemia    chronic lymphocytic leukemia

    2 diseases from the University of Copenhagen DISEASES database for CSF3R:
    Neutropenia     Leukemia

    10/44 Novoseek disease relationships for CSF3R gene (see all 44)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    neutropenia, severe congenital 94.1 49 11110716 (2), 9691084 (2), 9885206 (2), 9001427 (2) (see all 31)
    neutropenia 64.1 41 18536571 (3), 19794089 (3), 11238134 (2), 12670333 (2) (see all 22)
    leukemogenesis 63.6 14 18536571 (3), 8876234 (1), 19120359 (1), 16620545 (1) (see all 8)
    kostmanns syndrome 63.1 1 15677477 (1)
    leukemia 61.7 29 16670064 (3), 11238134 (2), 12670333 (2), 12475443 (2) (see all 19)
    myelodysplastic syndromes 58.8 17 12670333 (2), 18637807 (2), 15370243 (2), 9548419 (2) (see all 10)
    myeloid leukemia 54.5 9 1701353 (1), 7509213 (1), 9815618 (1), 12788061 (1) (see all 8)
    pulmonary alveolar proteinosis 53.4 1 20040766 (1)
    myeloproliferative disorders 41.4 1 19620628 (1)
    leukemia promyelocytic acute 41.2 1 9590146 (1)

    Genetic Association Database (GAD): CSF3R
    Human Genome Epidemiology (HuGE) Navigator: CSF3R (11 documents)

    Export disorders for CSF3R gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CSF3R gene, integrated from 9 sources (see all 374):
    (articles sorted by number of sources associating them with CSF3R)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Tyrosine 729 of the G-CSF receptor controls the duration of receptor signaling: involvement of SOCS3 and SOCS1. (PubMed id 16033816)1, 7, 9 Zhuang D....Dong F. (2005)
    2. An activating mutation in the CSF3R gene induces a hereditary chronic neutrophilia. (PubMed id 19620628)1, 2, 9 Plo I.... de Botton S. (2009)
    3. Homodimeric cross-over structure of the human granulocyte colony- stimulating factor (GCSF) receptor signaling complex. (PubMed id 16492764)1, 2, 9 Tamada T....Kuroki R. (2006)
    4. Identification of a nonsense mutation in the granulocyte-colony- stimulating factor receptor in severe congenital neutropenia. (PubMed id 7514305)1, 2, 9 Dong F.... Lowenberg B. (1994)
    5. Distinct patterns of mutations occurring in de novo AML versus AML arising in the setting of severe congenital neutropenia. (PubMed id 17494858)1, 7 Link D.C....Ley T.J. (2007)
    6. Novel role of WD40 and SOCS box protein-2 in steady-s tate distribution of granulocyte colony-stimulating factor receptor and G-CSF-c ontrolled proliferation and differentiation signaling. (PubMed id 17001306)1, 7 Erkeland S.J....Touw I.P. (2007)
    7. A functional single-nucleotide polymorphism of the G- CSF receptor gene predisposes individuals to high-risk myelodysplastic syndrome . (PubMed id 15644419)1, 4 WAPlfler A....Sill H. (2005)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Solution structure of an extracellular domain containing the WSxWS motif of the granulocyte colony-stimulating factor receptor and its interaction with ligand. (PubMed id 9187659)1, 2 Yamasaki K.... Ota Y. (1997)
    10. Identification of a ligand-binding site on the granulocyte colony- stimulating factor receptor by molecular modeling and mutagenesis. (PubMed id 9368043)1, 2 Layton J.E.... Treutlein H.R. (1997)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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      Query String
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 1441 HGNC: 2439 AceView: CSF3R Ensembl:ENSG00000119535 euGenes: HUgn1441
    ECgene: CSF3R Kegg: 1441 H-InvDB: CSF3R

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CSF3R Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for CSF3R Genetics and Cytogenetics in Oncology and Haematology
    SeattleSNPshttp://pga.gs.washington.edu/data/csf3r/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CSF3R gene:
    Search GeneIP for patents involving CSF3R

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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