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Aliases for CSAG4 Gene

Aliases for CSAG4 Gene

  • CSAG Family Member 4 (Pseudogene) 2 3 5
  • CSAG Family, Member 4 (Pseudogene) 2
  • CSAG Family, Member 4 2

External Ids for CSAG4 Gene

Previous GeneCards Identifiers for CSAG4 Gene

  • GC0XU900576
  • GC0XM151629
  • GC0XM151646
  • GC0XM151877
  • GC0XM151897
  • GC0XM151898
  • GC0XM151900
  • GC0XM151901
  • GC0XM151902

Summaries for CSAG4 Gene

GeneCards Summary for CSAG4 Gene

CSAG4 (CSAG Family Member 4 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CSAG4 Gene

Genomics for CSAG4 Gene

Regulatory Elements for CSAG4 Gene

Promoters for CSAG4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CSAG4 on UCSC Golden Path with GeneCards custom track

Genomic Location for CSAG4 Gene

Chromosome:
X
Start:
152,733,827 bp from pter
End:
152,740,985 bp from pter
Size:
7,159 bases
Orientation:
Plus strand

Genomic View for CSAG4 Gene

Genes around CSAG4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CSAG4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSAG4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CSAG4 Gene

Proteins for CSAG4 Gene

Post-translational modifications for CSAG4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSAG4 Gene

Domains & Families for CSAG4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CSAG4 Gene

Function for CSAG4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSAG4 Gene

Localization for CSAG4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CSAG4 Gene

Pathways & Interactions for CSAG4 Gene

SuperPathways for CSAG4 Gene

No Data Available

Interacting Proteins for CSAG4 Gene

Gene Ontology (GO) - Biological Process for CSAG4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CSAG4 Gene

Drugs & Compounds for CSAG4 Gene

No Compound Related Data Available

Transcripts for CSAG4 Gene

mRNA/cDNA for CSAG4 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CSAG4 Gene

No ASD Table

Relevant External Links for CSAG4 Gene

GeneLoc Exon Structure for
CSAG4
ECgene alternative splicing isoforms for
CSAG4

Expression for CSAG4 Gene

mRNA expression in normal human tissues for CSAG4 Gene

mRNA differential expression in normal tissues according to GTEx for CSAG4 Gene

This gene is overexpressed in Testis (x29.5).
genes like me logo Genes that share expression patterns with CSAG4: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CSAG4 Gene

Orthologs for CSAG4 Gene

Evolution for CSAG4 Gene

ENSEMBL:
Gene Tree for CSAG4 (if available)
TreeFam:
Gene Tree for CSAG4 (if available)

No data available for Orthologs for CSAG4 Gene

Paralogs for CSAG4 Gene

No data available for Paralogs for CSAG4 Gene

Variants for CSAG4 Gene

Sequence variations from dbSNP and Humsavar for CSAG4 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs2471768 -- 152,740,688(-) AGCGG(C/T)GGTCT nc-transcript-variant
rs2471769 -- 152,739,677(-) ctgtg(C/T)atgtG intron-variant
rs2471770 -- 152,739,169(-) aaaac(A/G)taaga intron-variant
rs2471771 -- 152,738,333(-) GCCCA(C/T)GCCTA intron-variant
rs2515827 -- 152,740,932(-) GGGGT(A/G)TAAAA nc-transcript-variant

Relevant External Links for CSAG4 Gene

HapMap Linkage Disequilibrium report
CSAG4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSAG4 Gene

Disorders for CSAG4 Gene

Relevant External Links for CSAG4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CSAG4

No disorders were found for CSAG4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CSAG4 Gene

Publications for CSAG4 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67

Products for CSAG4 Gene

Sources for CSAG4 Gene

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