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Aliases for CRYGEP Gene

Aliases for CRYGEP Gene

  • Crystallin Gamma E, Pseudogene 2 3 5
  • Crystallin, Gamma E Pseudogene 1 2 3
  • Crystallin, Gamma E, Pseudogene 2
  • Crystallin, Gamma D Pseudogene 3
  • D2S1472 3
  • CRYGEP1 3
  • CRYG5 3
  • CCL 3
  • G2 3

External Ids for CRYGEP Gene

Previous HGNC Symbols for CRYGEP Gene

  • CRYG5
  • CCL
  • CRYGEP1

Previous GeneCards Identifiers for CRYGEP Gene

  • GC02M208680
  • GC02M208973

Summaries for CRYGEP Gene

GeneCards Summary for CRYGEP Gene

CRYGEP (Crystallin Gamma E, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRYGEP Gene

Genomics for CRYGEP Gene

Regulatory Elements for CRYGEP Gene

Enhancers for CRYGEP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F208112 0.2 ENCODE 13.1 -0.3 -341 1.6 SIX4 TBP MAX FEZF1 RAD21 ZNF2 RFX5 GATA3 CTBP1 ZBTB48 CRYGEP CRYGB IDH1-AS1 IDH1 CRYGA FZD5 CRYGD GC02P208116
GH02F208134 0.9 Ensembl ENCODE 11.5 -23.1 -23109 2.1 ELF3 MLX ZNF48 ZSCAN9 RARA CREM MIXL1 THAP11 NFYC MXD4 CRYGA CRYGEP IDH1-AS1 IDH1 LOC100533727 CRYGD
GH02F208129 0.6 ENCODE 7.9 -17.8 -17828 1.1 ELF3 MLX ARID4B THRB ZNF48 ZSCAN9 RARA SLC30A9 CREM MIXL1 CRYGA IDH1-AS1 IDH1 CRYGEP LOC100533727 CRYGD
GH02F208101 0.2 Ensembl 5.7 +11.6 11617 0.2 ZNF384 CRYGD CRYGC IDH1-AS1 IDH1 CRYGB FZD5 CRYGEP GC02M208099 LOC105373854
GH02F208103 0.2 Ensembl 5.5 +11.0 11016 0.6 CTCF ZNF654 MBD1 KLF9 RAD21 MAFK CRYGD CRYGC IDH1-AS1 IDH1 CRYGB FZD5 CRYGEP GC02M208099 LOC105373854
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CRYGEP on UCSC Golden Path with GeneCards custom track

Promoters for CRYGEP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001831979 17 201 L3MBTL2 TRIM28

Genomic Location for CRYGEP Gene

Chromosome:
2
Start:
208,108,164 bp from pter
End:
208,112,717 bp from pter
Size:
4,554 bases
Orientation:
Minus strand

Genomic View for CRYGEP Gene

Genes around CRYGEP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRYGEP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRYGEP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRYGEP Gene

Proteins for CRYGEP Gene

Post-translational modifications for CRYGEP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CRYGEP Gene

Domains & Families for CRYGEP Gene

Gene Families for CRYGEP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CRYGEP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CRYGEP Gene

Function for CRYGEP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CRYGEP Gene

Localization for CRYGEP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CRYGEP Gene

Pathways & Interactions for CRYGEP Gene

SuperPathways for CRYGEP Gene

No Data Available

Interacting Proteins for CRYGEP Gene

Gene Ontology (GO) - Biological Process for CRYGEP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CRYGEP Gene

Transcripts for CRYGEP Gene

mRNA/cDNA for CRYGEP Gene

(7) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CRYGEP Gene

No ASD Table

Relevant External Links for CRYGEP Gene

GeneLoc Exon Structure for
CRYGEP
ECgene alternative splicing isoforms for
CRYGEP

Expression for CRYGEP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CRYGEP Gene

mRNA differential expression in normal tissues according to GTEx for CRYGEP Gene

This gene is overexpressed in Ovary (x7.8), Brain - Anterior cingulate cortex (BA24) (x6.2), Brain - Amygdala (x6.0), Brain - Substantia nigra (x5.6), Brain - Hypothalamus (x5.1), Brain - Cortex (x4.7), and Brain - Hippocampus (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of CRYGEP Gene:

CRYGEP
genes like me logo Genes that share expression patterns with CRYGEP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CRYGEP Gene

Orthologs for CRYGEP Gene

Evolution for CRYGEP Gene

ENSEMBL:
Gene Tree for CRYGEP (if available)
TreeFam:
Gene Tree for CRYGEP (if available)

No data available for Orthologs for CRYGEP Gene

Paralogs for CRYGEP Gene

No data available for Paralogs for CRYGEP Gene

Variants for CRYGEP Gene

Relevant External Links for CRYGEP Gene

Human Gene Mutation Database (HGMD)
CRYGEP
SNPedia medical, phenotypic, and genealogical associations of SNPs for
CRYGEP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CRYGEP Gene

Disorders for CRYGEP Gene

No disorders were found for CRYGEP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CRYGEP Gene

Publications for CRYGEP Gene

  1. Activation of the gamma E-crystallin pseudogene in the human hereditary Coppock-like cataract. (PMID: 8004095) Brakenhoff R.H. … Schoenmakers J.G. (Hum. Mol. Genet. 1994) 2 3 64
  2. Conversion and compensatory evolution of the gamma-crystallin genes and identification of a cataractogenic mutation that reverses the sequence of the human CRYGD gene to an ancestral state. (PMID: 17564961) Plotnikova O.V. … Rogaev E.I. (Am. J. Hum. Genet. 2007) 22 64
  3. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64
  4. Gamma-crystallins of the human eye lens: expression analysis of five members of the gene family. (PMID: 3670288) Meakin S.O. … Breitman M.L. (Mol. Cell. Biol. 1987) 3 64
  5. Structural and evolutionary relationships among five members of the human gamma-crystallin gene family. (PMID: 4033658) Meakin S.O. … Tsui L.-C. (Mol. Cell. Biol. 1985) 3 64

Products for CRYGEP Gene

Sources for CRYGEP Gene

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