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Aliases & Descriptions for CRP
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| MGC149895 2 | | MGC88244 2 | | OTTHUMP00000033307 2 | | PTX1 1, 2, 3 |
| | | Descriptions |
|---|
| C-reactive protein, pentraxin-related 2 |
|
| | Search outside databases for aliases for CRP genePrevious GC identifers: GC01M157474 GC01M155414 GC01M156459 GC01M156899 GC01M156495 |
Summaries for CRP(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: CRP_HUMAN, P02741Function: Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cellsGene Wiki entry for CRP (C-reactive_protein) |
Genomic Location for CRP
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CRP gene 
Entrez Gene cytogenetic band: 1q21-q23 Ensembl cytogenetic band: 1q23.2 HGNC cytogenetic band: 1q21-q23CRP Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M157948:
(about GC identifiers)
Start:
|
157,948,703 bp from pter |
End:
|
157,951,003 bp from pter |
Size:
|
2,301 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000001.9 NT_004487.18
| Proteins for CRP
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CRP_HUMAN, P02741 (See
protein sequence)Recommended Name: C-reactive protein precursor Size: 224 amino acids; 25039 Da
Cofactor: Binds 2 calcium ions per subunit
Subunit: Homopentamer. Pentaxin (or pentraxin) have a discoid arrangement of 5 non-covalently bound subunits
Subcellular location: Secreted
Mass spectrometry: Mass=23028; Method=MALDI; Range=19-224; Source=Ref.14;
Mass spectrometry: Mass=22930; Method=MALDI; Range=19-223; Source=Ref.14;
Miscellaneous: This protein owes its name to its ability precipitate pneumococcal C-polysaccharide in the presence of calcium
PDB structures from and Proteopedia :1B09 (3D)
 1CRV (3D)
 1GNH (3D)
 1LJ7 (3D)
 
Secondary accessions: A8K078 Q08AK3 Q8WW75Alternative splicing: 2 isoforms: P02741-1 P02741-2 REFSEQ proteins: NP_000558.2
ENSEMBL proteins: ENSP00000255030 ENSP00000340882 ENSP00000357093 ENSP00000357092 ENSP00000357091
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: CRP 
1 Gene Ontology (GO) cellular component term (links to tree view): About this table
Antibodies for CRP: Assays for CRP: | Protein
Domains/ Families for CRP(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P02741
ProtoNet protein and cluster: P02741 1 Blocks protein family: IPB001759 Pentaxin
UniProtKB/Swiss-Prot: CRP_HUMAN, P02741Similarity: Belongs to the pentaxin familySimilarity: Contains 1 pentaxin domain | Gene Function for CRP
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000567
Applied Biosystems Silencer® siRNAs for CRP
Sigma-Aldrich siRNA for CRP  Sigma-Aldrich shRNA for CRP  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000567                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000567                                  untagged cDNA clone in CMV expression vector: NM_000567 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000567
UniProtKB/Swiss-Prot: CRP_HUMAN, P02741Function: Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cellsInduction: The concentration of CRP in plasma increases greatly during acute phase response to tissue injury, infection or other inflammatory stimuli. It is induced by IL-1 and IL-6Genatlas biochemistry entry for CRP:C-reactive protein,acute phase reactant,pentaxin (pentraxin) family,bacterial catabolite activator protein5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CRP
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for CRP (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CRP 
5/103 Interacting proteins for CRP (P027411, 2 ENSP000002550303) via UniProtKB, MINT, and/or STRING (see all 103
)About this table
5 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for CRP(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CRP 10/33 Novoseek chemical compound relationships for CRP gene (see all 33
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| fibrinogen |
86.75 |
1531 |
12738395 (10), 16703188 (8), 11427220 (7), 16698114 (7) (see all 99) |
| cholesterol |
78.87 |
1167 |
15635109 (8), 15766555 (7), 17996517 (6), 12102655 (5) (see all 99) |
| homocysteine |
73.89 |
402 |
17852421 (7), 15051846 (6), 18311078 (5), 12788842 (5) (see all 99) |
| neopterin |
71.14 |
232 |
18541395 (7), 1764778 (5), 15848499 (5), 15253949 (5) (see all 87) |
| aopp |
66.37 |
58 |
18786315 (7), 17058827 (4), 15354943 (3), 14739577 (3) (see all 20) |
| phosphorylcholine |
64.23 |
223 |
7979374 (9), 12218140 (8), 1704398 (7), 12244213 (6) (see all 57) |
| glucose |
63.62 |
728 |
14706052 (7), 18691271 (7), 19130414 (5), 15955391 (5) (see all 99) |
| lipid |
63.04 |
478 |
17356986 (5), 16775668 (5), 12542120 (5), 18940224 (4) (see all 99) |
| uric acid |
55.39 |
167 |
16079884 (6), 17599452 (5), 16251237 (5), 16611716 (4) (see all 90) |
| p002 |
54.16 |
65 |
12801614 (2), 12161055 (2), 16231577 (2), 11781754 (1) (see all 45) |
About this table
2 PharmGKB drug compound relationships for CRP geneAbout this table
|
Transcripts for CRP(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000567
Sigma-Aldrich siRNA for CRP  Sigma-Aldrich shRNA for CRP  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000567 REFSEQ mRNAs for CRP gene: NM_000567.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000567               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000567                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000567                                  untagged cDNA clone in CMV expression vector: NM_000567  Additional cDNA sequence: BC020766.1 BC070257.1 16 DOTS entries: DT.448901 DT.102829615 DT.100826852 DT.100826853 DT.92446899 DT.92446914 DT.100826854 DT.92446905 DT.92446889 DT.92446887 DT.92446904 DT.92446908 DT.95111437 DT.95111452 DT.95111466 DT.92446903 24/248 AceView cDNA sequences (see all 248
):AA344310 AA344672 AV658544 AA343486 AW192271 AV653853 AA343521 BG568547 BG616481 T61726 BG569474 AA345584 AA344442 AA343492 AA345587 AI571524 CB146596 AA345050 AV661354 AA345783 AA343520 CR598604 AA345681 AI431430
highest scoring ESTs for CRP:X56692 AA343439 AA343492 AA343521 AA343738 AA343870 AA344005 AA344022 AA344098 AA344196 Unigene Clusters for CRP: C-reactive protein, pentraxin-related Hs.76452 [show with all ESTs], Hs.709456 [show with all ESTs]Unigene Representative Sequences: NM_000567, BC070257
GeneLoc Exon Structure
5/8 Alternative Splicing Database (ASD) splice patterns (SP) for CRP (see all 8
)
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | · | 4c | ^ | 5 | ^ | 6a | · | 6b | · | 6c | · | 6d | · | 6e | · | 6f | |
| SP1: | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | - |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CRP
5 Ensembl transcripts including schematic representations: ENST00000255030
ENST00000343919
ENST00000368112
ENST00000368111
ENST00000368110
|
Expression for CRP
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CRP expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CRP
1 / 2 / 3 5 probe-sets matching CRP gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene clusters: Hs.76452 Hs.709456
Expression variation in blood from EXPOLDB for CRP UniProtKB/Swiss-Prot: CRP_HUMAN, P02741Tissue specificity: Found in plasma |
Orthologs for CRP
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CRP gene from 5/7 species (see all 7
)
About this table Species with no ortholog for CRP
ENSEMBL Gene Tree for CRP | Paralogs for CRP(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CRP gene
- APCS2 C16orf382 PTX32
Pseudogenes
- 2 related pseudogenes
|
SNPs/Variants for CRP(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CRP (up to first 250kb)
|
Disorders & Mutations for CRP
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 123260
10/93 Novoseek disease relationships for CRP gene (see all 93
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| inflammation |
91.70 |
2040 |
15496560 (5), 15550763 (4), 19272152 (4), 15472532 (4) (see all 99) |
| response acute phase |
90.03 |
240 |
14634117 (3), 10353472 (3), 1699702 (3), 14743546 (3) (see all 99) |
| cardiovascular diseases |
84.59 |
602 |
15529024 (6), 12823355 (4), 18855714 (4), 10393687 (4) (see all 99) |
| atherosclerosis |
83.70 |
494 |
12468765 (5), 17576871 (4), 11448405 (3), 16526209 (3) (see all 99) |
| rheumatoid arthritis |
83.56 |
131 |
16489709 (3), 8539481 (2), 17516213 (2), 10986307 (2) (see all 99) |
| necrosis |
75.89 |
676 |
12732100 (3), 2014508 (3), 7517087 (2), 16923454 (2) (see all 99) |
| coronary heart disease |
74.73 |
286 |
12796068 (5), 18178405 (3), 12835213 (3), 18930961 (3) (see all 99) |
| insulin resistance |
74.73 |
344 |
15542929 (5), 19188739 (5), 15983332 (4), 18360022 (4) (see all 99) |
| coronary artery disease |
73.53 |
195 |
11703959 (3), 9781965 (3), 12587783 (2), 15136066 (2) (see all 99) |
| bacterial infections |
72.03 |
218 |
18534215 (6), 10530060 (5), 12149826 (5), 8038314 (4) (see all 99) |
About this table
4 PharmGKB disease relationships for CRP geneAbout this table
Human Gene Mutation Database: CRP Genetic Association Database: CRP Human Genome Epidemiology Navigator: CRP (429 documents)
|
Medical News for CRP(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for CRP (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/4746 PubMed articles for CRP gene (see all 4746
):- -717A>G polymorphism of human C-reactive protein gene associated with coronary heart disease in ethnic Han Chinese: the Beijing atherosclerosis study. (PubMed id 15517131)3, 6, 7 Chen J....Gu D. (2005)
- A C-reactive protein promoter polymorphism is associated with type 2 diabetes mellitus in Pima Indians. (PubMed id 12618085)3, 6, 7 Wolford J.K....Hanson R.L. (2003)
- Characterization of genomic and complementary DNA sequence of human C-reactive protein, and comparison with the complementary DNA sequence of serum amyloid P component. (PubMed id 3840479)2, 3, 4 Woo P.... Whitehead A.S. (1985)
- Isolation of human C-reactive protein complementary DNA and localization of the gene to chromosome 1. (PubMed id 6857266)2, 3, 4 Whitehead A.S....Woods D.E. (1983)
- Epistatic effect of C-reactive protein (CRP) single nucleotide polymorphism (SNP) +1059 and interleukin-1B SNP +3954 on CRP concentration in healthy male blood donors. (PubMed id 16026589)1, 3, 6 Eklund C....Hurme M. (2005)
- Relation of polymorphism within the C-reactive protein gene and plasma CRP levels. (PubMed id 15585211)1, 3, 6 Suk H.J....Zee R.Y. (2005)
- Single-nucleotide polymorphisms in the C-reactive protein (CRP) gene promoter that affect transcription factor binding, alter transcriptional activity, and associate with differences in baseline serum CRP level. (PubMed id 15778807)1, 3, 6 Szalai A.J....Kimberly R.P. (2005)
- Association between baseline levels of C-reactive protein (CRP) and a dinucleotide repeat polymorphism in the intron of the CRP gene. (PubMed id 11857055)1, 3, 6 Szalai A.J....Kimberly R.P. (2002)
- C-reactive protein genotypes affect baseline, but not exercise training-induced changes, in C-reactive protein levels. (PubMed id 15271790)1, 3, 6 Obisesan T.O....Hagberg J.M. (2004)
- The physiological structure of human C-reactive protein and its complex with phosphocholine. (PubMed id 10368284)1, 3, 4 Thompson D.... Wood S.P. (1999)
|
Search for CRP
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CRP
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CRP
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CRP(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| Wikipedia | http://en.wikipedia.org/wiki/C-reactive_protein | | SeattleSNPs | http://pga.gs.washington.edu/data/crp/ | | Protein Spotlight | http://www.expasy.org/spotlight/back_issues/sptlt030.shtml |
|
| | | About This Section
| --
| Services for CRP(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CRP:

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Incremental update: 13 Oct 2009
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