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Aliases for CROCCP4 Gene

Aliases for CROCCP4 Gene

  • Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 4 2 3 5

External Ids for CROCCP4 Gene

Previous GeneCards Identifiers for CROCCP4 Gene

  • GC01P017079
  • GC01P017081
  • GC01P017096
  • GC01P017104
  • GC01P016750
  • GC01P016746
  • GC01P016751
  • GC01P016755
  • GC01P016758

Summaries for CROCCP4 Gene

GeneCards Summary for CROCCP4 Gene

CROCCP4 (Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CROCCP4 Gene

Genomics for CROCCP4 Gene

Regulatory Elements for CROCCP4 Gene

Enhancers for CROCCP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G016706 1.5 Ensembl ENCODE dbSUPER 4.8 -33.1 -33065 2.2 ATF1 ZNF133 SIN3A GLI4 ZNF2 ZNF48 ZBTB7B ZNF121 GLIS2 ZNF416 LINC01772 SPEN MST1L ESPNP CROCCP4 ENSG00000279151
GH01G016744 0.5 dbSUPER 0.7 +0.1 93 0.2 CTCF CEBPA HLF PIR38064 CROCCP4
GH01G016746 0.5 dbSUPER 0.7 +0.1 79 0.1 CTCF CEBPA HLF CROCCP4 PIR38064
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CROCCP4 on UCSC Golden Path with GeneCards custom track

Promoters for CROCCP4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000002120 120 1201 CTCF CEBPA HLF

Genomic Location for CROCCP4 Gene

Chromosome:
1
Start:
16,740,280 bp from pter
End:
16,750,968 bp from pter
Size:
10,689 bases
Orientation:
Plus strand

Genomic View for CROCCP4 Gene

Genes around CROCCP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CROCCP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CROCCP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CROCCP4 Gene

Proteins for CROCCP4 Gene

Post-translational modifications for CROCCP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CROCCP4 Gene

Domains & Families for CROCCP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CROCCP4 Gene

Function for CROCCP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CROCCP4 Gene

Localization for CROCCP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CROCCP4 Gene

Pathways & Interactions for CROCCP4 Gene

SuperPathways for CROCCP4 Gene

No Data Available

Interacting Proteins for CROCCP4 Gene

Gene Ontology (GO) - Biological Process for CROCCP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CROCCP4 Gene

Transcripts for CROCCP4 Gene

mRNA/cDNA for CROCCP4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CROCCP4 Gene

No ASD Table

Relevant External Links for CROCCP4 Gene

GeneLoc Exon Structure for
CROCCP4
ECgene alternative splicing isoforms for
CROCCP4

Expression for CROCCP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CROCCP4 Gene

mRNA differential expression in normal tissues according to GTEx for CROCCP4 Gene

This gene is overexpressed in Testis (x5.3).

NURSA nuclear receptor signaling pathways regulating expression of CROCCP4 Gene:

CROCCP4
genes like me logo Genes that share expression patterns with CROCCP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CROCCP4 Gene

Orthologs for CROCCP4 Gene

Evolution for CROCCP4 Gene

ENSEMBL:
Gene Tree for CROCCP4 (if available)
TreeFam:
Gene Tree for CROCCP4 (if available)

No data available for Orthologs for CROCCP4 Gene

Paralogs for CROCCP4 Gene

No data available for Paralogs for CROCCP4 Gene

Variants for CROCCP4 Gene

Relevant External Links for CROCCP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CROCCP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CROCCP4 Gene

Disorders for CROCCP4 Gene

No disorders were found for CROCCP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CROCCP4 Gene

Publications for CROCCP4 Gene

No publications were found for CROCCP4 Gene.

Products for CROCCP4 Gene

Sources for CROCCP4 Gene

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