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Aliases for CROCCP3 Gene

Aliases for CROCCP3 Gene

  • Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 3 2 3
  • Ciliary Rootlet Coiled-Coil, Rootletin-Like 2 2 3
  • CROCCL2 3 4
  • Ciliary Rootlet Coiled-Coil Protein Pseudogene 3 4
  • DJ798A10.2 3
  • KIAA1922 4

External Ids for CROCCP3 Gene

Previous HGNC Symbols for CROCCP3 Gene


Previous GeneCards Identifiers for CROCCP3 Gene

  • GC01M016794
  • GC01M015311

Summaries for CROCCP3 Gene

GeneCards Summary for CROCCP3 Gene

CROCCP3 (Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CROCCP3 Gene

Genomics for CROCCP3 Gene

Genomic Location for CROCCP3 Gene

16,467,436 bp from pter
16,499,257 bp from pter
31,822 bases
Minus strand

Genomic View for CROCCP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CROCCP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CROCCP3 Gene

No data available for Regulatory Elements for CROCCP3 Gene

Proteins for CROCCP3 Gene

  • Protein details for CROCCP3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative ciliary rootlet coiled-coil protein-like 2 protein
    Protein Accession:
    Secondary Accessions:
    • Q96PW6

    Protein attributes for CROCCP3 Gene

    287 amino acids
    Molecular mass:
    33334 Da
    Quaternary structure:
    No Data Available
    • Sequence=BAB67815.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

neXtProt entry for CROCCP3 Gene

Proteomics data for CROCCP3 Gene at MOPED

Post-translational modifications for CROCCP3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for CROCCP3 Gene

Domains & Families for CROCCP3 Gene

Protein Domains for CROCCP3 Gene


Suggested Antigen Peptide Sequences for CROCCP3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the rootletin family.
  • Belongs to the rootletin family.
genes like me logo Genes that share domains with CROCCP3: view

No data available for Gene Families for CROCCP3 Gene

Function for CROCCP3 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CROCCP3

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CROCCP3 Gene

Localization for CROCCP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CROCCP3 Gene

Pathways & Interactions for CROCCP3 Gene

SuperPathways for CROCCP3 Gene

No Data Available

Interacting Proteins for CROCCP3 Gene

Gene Ontology (GO) - Biological Process for CROCCP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for CROCCP3 Gene

Drugs & Compounds for CROCCP3 Gene

No Compound Related Data Available

Transcripts for CROCCP3 Gene

Unigene Clusters for CROCCP3 Gene

Ciliary rootlet coiled-coil, rootletin pseudogene 3:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CROCCP3

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CROCCP3 Gene

No ASD Table

Relevant External Links for CROCCP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CROCCP3 Gene

mRNA expression in normal human tissues for CROCCP3 Gene

mRNA differential expression in normal tissues according to GTEx for CROCCP3 Gene

This gene is overexpressed in Brain - Cerebellum (x4.9) and Brain - Cerebellar Hemisphere (x4.8).

SOURCE GeneReport for Unigene cluster for CROCCP3 Gene Hs.597881

genes like me logo Genes that share expression patterns with CROCCP3: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CROCCP3 Gene

Orthologs for CROCCP3 Gene

Evolution for CROCCP3 Gene

Gene Tree for CROCCP3 (if available)
Gene Tree for CROCCP3 (if available)

No data available for Orthologs for CROCCP3 Gene

Paralogs for CROCCP3 Gene

(1) SIMAP similar genes for CROCCP3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CROCCP3: view

No data available for Paralogs for CROCCP3 Gene

Variants for CROCCP3 Gene

Sequence variations from dbSNP and Humsavar for CROCCP3 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs14126 -- 16,469,190(-) gtagt(C/T)ctcag nc-transcript-variant
rs149561 -- 16,470,990(-) tgccc(A/G)ccacc intron-variant
rs149562 -- 16,468,706(+) CTATT(C/T)GAGTC nc-transcript-variant
rs149565 -- 16,468,422(-) ACAAG(A/G)CTTCT nc-transcript-variant
rs156845 -- 16,474,982(+) aaaac(A/C)aaaac intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CROCCP3 Gene

Variant ID Type Subtype PubMed ID
dgv28e1 CNV Complex 17122850
dgv29e1 CNV Complex 17122850
nsv428421 CNV Gain+Loss 18775914
dgv1n68 CNV Loss 17160897
nsv9324 CNV Gain+Loss 18304495
nsv870673 CNV Gain 21882294
nsv436814 CNV Insertion 17901297
esv2750816 CNV Gain 17911159
dgv30e1 CNV Complex 17122850
esv2677321 CNV Deletion 23128226
nsv159668 CNV Loss 16902084
dgv20e201 CNV Deletion 23290073
esv2678817 CNV Deletion 23128226

Relevant External Links for CROCCP3 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CROCCP3 Gene

Disorders for CROCCP3 Gene

Relevant External Links for CROCCP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with CROCCP3: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CROCCP3 Gene

Publications for CROCCP3 Gene

  1. Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. (PMID: 11572484) Nagase T. … Ohara O. (DNA Res. 2001) 2 67
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 67
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for CROCCP3 Gene

Sources for CROCCP3 Gene

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