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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

CRMP1 Gene

protein-coding GIFtS: 64
GCID: GC04M005815

Collapsin Response Mediator Protein 1

10 related diseases
at

MalaCards

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, ¹⁰fRNAdb, ¹²H-InvDB, ¹³NCBI, ¹⁴NONCODE, and/or ¹⁵RNAdb)
About This Section

Aliases
Collapsin Response Mediator Protein 1¹ ² ³		DRP1² ⁵
DPYSL1² ³ ⁵		Dihydropyrimidinase Related Protein-1²
Unc-33-Like Phosphoprotein 3² ³		Dihydropyrimidinase-Like 1²
CRMP-1² ³		Dihydropyrimidinase-Related Protein 1²
DRP-1² ³		ULIP3³
ULIP-3² ³

External Ids:	HGNC: 2365¹	Entrez Gene: 1400²	Ensembl: ENSG00000072832⁷	OMIM: 602462⁵	UniProtKB: Q14194³

Export aliases for CRMP1 gene to outside databases

Previous GC identifers: GC04M005704 GC04P005871 GC04M005887 GC04M005940

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CRMP1 Gene:

This gene encodes a member of a family of cytosolic phosphoproteins expressed exclusively in the nervous system. The

encoded protein is thought to be a part of the semaphorin signal transduction pathway implicated in semaphorin-induced

growth cone collapse during neural development. Alternative splicing results in multiple transcript variants.

(provided by RefSeq, Jul 2008)

GeneCards Summary for CRMP1 Gene:

CRMP1 (collapsin response mediator protein 1) is a protein-coding gene. Diseases associated with CRMP1 include ellis-van creveld syndrome, and lung adenocarcinoma, and among its related super-pathways are Axon guidance and Sema4D in semaphorin signaling. GO annotations related to this gene include protein binding and hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides. An important paralog of this gene is DPYSL3.

UniProtKB/Swiss-Prot: DPYL1_HUMAN, Q14194

Function: Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in

axon guidance, invasive growth and cell migration

Gene Wiki entry for CRMP1 Gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000004.11 NT_006051.18 NC_018915.2

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the CRMP1 gene promoter:
NRSF form 1 MyoD NRSF form 2 Tal-1beta E47
Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): CRMP1 promoter sequence

Search SABiosciences Chromatin IP Primers for CRMP1

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CRMP1

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4p16.1 Ensembl cytogenetic band: 4p16.2 HGNC cytogenetic band: 4p16.1

CRMP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CRMP1 gene location

GeneLoc information about chromosome 4 GeneLoc Exon Structure

GeneLoc location for GC04M005815: view genomic region (about GC identifiers)

Start:	5,749,811 bp from pter	End:	5,894,785 bp from pter
Size:	144,975 bases	Orientation:	minus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE ¹MOPED, ²PaxDb, and ³MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: DPYL1_HUMAN, Q14194 (See protein sequence)

Recommended Name: Dihydropyrimidinase-related protein 1

Size: 572 amino acids; 62184 Da

Subunit: Homotetramer, and heterotetramer with DPYSL2, DPYSL3, DPYSL4 or DPYSL5. Interacts with PLXNA1 (By similarity)

Subcellular location: Cytoplasm. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Cytoplasm,

cytoskeleton, spindle. Note=Associated with centrosomes and the mitotic spindle during metaphase

Caution: Lacks most of the conserved residues that are essential for binding the metal cofactor and hence for

dihydropyrimidinase activity. Its enzyme activity is therefore unsure

Secondary accessions: A0EJG6 Q13024 Q4W5F1 Q96TC8

Alternative splicing: 2 isoforms: Q14194-1 Q14194-2

Explore the universe of human proteins at neXtProt for CRMP1: NX_Q14194

Explore proteomics data for CRMP1 at MOPED

Post-translational modifications:

View modification sites using PhosphoSitePlus

View neXtProt modification sites for NX_Q14194

CRMP1 Protein expression data from MOPED¹, PaxDb² and MAXQB³ : About this image

REFSEQ proteins (2 alternative transcripts):

NP_001014809.1 NP_001304.1

ENSEMBL proteins:

ENSP00000321606 ENSP00000380987 ENSP00000425742

Reactome Protein details: Q14194
Human Recombinant Protein Products for CRMP1:

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	Novus Biologicals CRMP1 Proteins Novus Biologicals CRMP1 Lysate
	Browse Sino Biological Recombinant Proteins Browse Sino Biological Cell Lysates
	ProSpec Recombinant Protein for CRMP1
	Cloud-Clone Corp. Proteins for CRMP1

Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005737	cytoplasm	IDA	--
GO:0005815	microtubule organizing center	IEA	--
GO:0005819	spindle	IEA	--
GO:0005829	cytosol	TAS	--
GO:0030425	dendrite	IEA	--

CRMP1 for ontologies About GeneDecksing

CRMP1 Antibody Products:

	EMD Millipore Mono- and Polyclonal Antibodies for the study of CRMP1
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Assay Products for CRMP1:

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(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

3 InterPro protein domains:

IPR011778 Hydantoinase/dihydroPyrase

IPR011059 Metal-dep_hydrolase_composite

IPR006680 Amidohydro_1

Graphical View of Domain Structure for InterPro Entry Q14194

ProtoNet protein and cluster: Q14194

2 Blocks protein domains:

IPB005847 Dihydroorotase region

IPB011550 Amidohydrolase-like

UniProtKB/Swiss-Prot: DPYL1_HUMAN, Q14194

Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily

CRMP1 for domains About GeneDecksing

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
About This Section

Molecular Function:

UniProtKB/Swiss-Prot Summary: DPYL1_HUMAN, Q14194

Function: Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in

axon guidance, invasive growth and cell migration

Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005515	protein binding	IPI	15383276
GO:0016787	hydrolase activity	--	--
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	--	--
GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEA	--

CRMP1 for ontologies About GeneDecksing

Phenotypes:
1 GenomeRNAi human phenotype for CRMP1:

Increased cell number in G1, s

3 MGI mutant phenotypes (inferred from 2 alleles) (MGI details for Crmp1):

behavior/neurological

cellular

nervous system

CRMP1 for phenotypes About GeneDecksing

Animal Models:
Mouse knock-out Crmp1^tm1.1Swl for CRMP1

inGenious Targeting Laboratory - Custom generated mouse model solutions for CRMP1

inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for CRMP1

miRNA Products:
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CRMP1
		8/26 QIAGEN miScript miRNA Assays for microRNAs that regulate CRMP1 (see all 26):
		hsa-miR-448 hsa-miR-362-3p hsa-miR-520d-5p hsa-miR-4318 hsa-miR-200a hsa-let-7a-2* hsa-miR-624* hsa-miR-888*

		SwitchGear 3'UTR luciferase reporter plasmid: CRMP1 3' UTR sequence

Inhib. RNA Products:		Browse for Gene Knock-down Tools from EMD Millipore
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Gene Editing Products:			DNA2.0 Custom Protein Engineering Service for CRMP1
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Clone Products:		Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
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In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CRMP1

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
About This Section

SuperPaths for CRMP1 About

See pathways by source

SuperPath

Contained pathways About

Axon guidance

Axon guidance

0.69

Developmental Biology

0.69

Sema4D in semaphorin signaling

Semaphorin interactions

0.41

SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion

CRMPs in Sema3A signaling

0.36

Semaphorin Signaling

Semaphorin Signaling

Guidance Cues and Growth Cone Motility

Guidance Cues and Growth Cone Motility

Pathways by source See SuperPaths
Show all pathways

2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CRMP1

	Guidance Cues and Growth Cone Motility
	Semaphorin Signaling

4 Reactome Pathways for CRMP1

	CRMPs in Sema3A signaling
	Developmental Biology
	Semaphorin interactions
	Axon guidance

CRMP1 for pathways About GeneDecksing

Interactions:

SABiosciences Gene Network Central^TM Interacting Genes and Proteins Network for CRMP1

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/125 Interacting proteins for CRMP1 (Q14194^{1, 2, 3} ENSP00000321606⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 125)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
AXIN1	O15169¹^,²^,³	EBI-473101,EBI-710484 MINT-64312 I2D: score=4
ENSG00000172850	Q9Y333²^,³	MINT-65810 I2D: score=4
ENSG00000224979	Q9Y333²^,³	MINT-65810 I2D: score=4
ENSG00000225998	Q9Y333²^,³	MINT-65810 I2D: score=4
ENSG00000231502	Q9Y333²^,³	MINT-65810 I2D: score=4

About this table

Gene Ontology (GO): 5 biological process terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006139	nucleobase-containing compound metabolic process	TAS	8973361
GO:0006208	pyrimidine nucleobase catabolic process	IEA	--
GO:0007399	nervous system development	TAS	8973361
GO:0007411	axon guidance	TAS	--
GO:0048666	neuron development	--	--

CRMP1 for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, IUPHAR, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for CRMP1 (DPYL1)

Search CenterWatch for drugs/clinical trials and news about CRMP1 / DPYL1

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for CRMP1 gene (2 alternative transcripts):

NM_001014809.1 NM_001313.3

Unigene Cluster for CRMP1:

Collapsin response mediator protein 1

Hs.135270 [show with all ESTs]

Unigene Representative Sequence: NM_001014809

6 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000506216 ENST00000324989(uc003gis.3) ENST00000397890(uc003giq.3)

ENST00000513911 ENST00000511535 ENST00000512574(uc003gir.3)

miRNA Products:
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CRMP1
		8/26 QIAGEN miScript miRNA Assays for microRNAs that regulate CRMP1 (see all 26):
		hsa-miR-448 hsa-miR-362-3p hsa-miR-520d-5p hsa-miR-4318 hsa-miR-200a hsa-let-7a-2* hsa-miR-624* hsa-miR-888*

		SwitchGear 3'UTR luciferase reporter plasmid: CRMP1 3' UTR sequence

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		Sirion Biotech Custom design and validation of potent shRNA sequences against CRMP1

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		QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CRMP1
		QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CRMP1

Additional mRNA sequence:

AK091696.1 AK094725.1 AK122754.1 AK127754.1 AK309379.1 BC000252.1 BC007613.1 BC007898.2

BT006806.1 D78012.1 DQ206871.1 U17278.1

20 DOTS entries:

DT.100762743 DT.100821208 DT.101983853 DT.100821182 DT.219724 DT.95087464 DT.100802877 DT.121270089

DT.100821181 DT.100821207 DT.121270099 DT.100821189 DT.100821214 DT.95087523 DT.100652789 DT.121270015

DT.121270062 DT.92448235 DT.102835332 DT.219725

24/379 AceView cDNA sequences (see all 379):

AA449627 BX441447 AW162899 AA333470 AK094725 Z42153 BM697311 BM893586

BC007613 AI357768 BM698495 AW583553 BM984316 AA873063 BE019357 BU687205

CR622220 T32217 BG055997 T31787 AI268591 AA948277 NM_001313 AA450245

GeneLoc Exon Structure

5/8 Alternative Splicing Database (ASD) splice patterns (SP) for CRMP1 (see all 8) About this scheme

ExUns:	1a	·	1b	^	2	^	3a	·	3b	^	4	^	5a	·	5b	·	5c	·	5d	^	6a	·	6b	^	7	^	8	^	9	^	10	^	11	^	12	^	13	^	14a	·	14b	^	15a	·	15b	^	16a	·	16b	·	16c
SP1:					-		-		-										-																				-				-
SP2:																			-																				-				-
SP3:													-		-		-		-
SP4:													-						-
SP5:					-		-		-

ECgene alternative splicing isoforms for CRMP1

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

CRMP1 expression in normal human tissues (normalized intensities) CRMP1 embryonic expression: see
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>^2/3
CGAP TAG: --

About this image

CRMP1 expression in embryonic tissues and stem cells About this table

Data from LifeMap, the Embryonic Development and Stem Cells Database

5/15 selected tissues (see all 15) fully expand


Brain (Nervous System) fully expand to see all 8 entries
Endothelial Cells Blood Brain Barrier
ganglion/cranial/facial VII

Gut Tube (Gastrointestinal Tract) fully expand to see all 4 entries
Foregut Endoderm Cells Foregut
Hindgut

Peripheral Nervous System (Nervous System) fully expand to see all 4 entries
autonomic/sympathetic/ganglion

Endothelium (Cardiovascular System) fully expand to see all 3 entries
Extraembryonic Angioblasts Extraembryonic Capillary Plexus

Reproductive System (Reproductive System) fully expand to see all 2 entries
Epiblast-like cells (Reconstitution of mouse germ cell from pluripotent stem cells)
visceral organ/genital tubercle of male

See CRMP1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for CRMP1

SOURCE GeneReport for Unigene cluster: Hs.135270

UniProtKB/Swiss-Prot: DPYL1_HUMAN, Q14194

Tissue specificity: Brain

SABiosciences Custom PCR Arrays for CRMP1

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		QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CRMP1

In Situ
Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CRMP1

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals and fungi.

Orthologs for CRMP1 gene from 7/14 species (see all 14) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
mouse (Mus musculus)	Mammalia	Crmp1^{1 , 5}	collapsin response mediator protein 1^{1, 5}	89.26(n)¹ 96.5(a)¹		5 (19.96 cM)⁵ 12933¹ NM_001136058.1¹ NP_001129530.1¹ 37242080⁵
chicken (Gallus gallus)	Aves	CRMP1¹	collapsin response mediator protein 1	81.75(n) 93.74(a)		395156 NM_204495.1 NP_989826.1
lizard (Anolis carolinensis)	Reptilia	CRMP1⁶ --	--	85(a) 21(a)	1 ↔ 1 possible ortholog	5(80502695-80553498) 3(35153312-35184148)
zebrafish (Danio rerio)	Actinopterygii	crmp1¹	collapsin response mediator protein 1	72.87(n) 79.61(a)		553756 NM_001020725.1 NP_001018561.1
fruit fly (Drosophila melanogaster)	Insecta	CRMP³	dihydropyrimidinase	45(a)		83B2 --
worm (Caenorhabditis elegans)	Secernentea	dhp-2³	Ulip like protein	48(a) (best of 3)		IV(9978361-9980884) --
baker's yeast (Saccharomyces cerevisiae)	Saccharomycetes	DAL1⁶	Allantoinase, converts allantoin to allantoate in ...	20(a)	1 → many	IX(406260-407642)

ENSEMBL Gene Tree for CRMP1 (if available)
TreeFam Gene Tree for CRMP1 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for CRMP1 gene

DPYSL3² DPYSL4² DPYSL5² DPYS² DPYSL2²

5 SIMAP similar genes for CRMP1 using alignment to 4 protein entries: DPYL1_HUMAN (see all proteins):

DPYSL2 DPYSL3 DPYSL4 DPYSL5 DPYS

CRMP1 for paralogs About GeneDecksing

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, ⁴UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 4 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs10608122^1,2	C	--	5812050(+)	`AAAAA-/A/A A/AAAGAGAT`	2	--	int¹		1		NA	2
rs183314050^1,2		--	5822022(+)	`ATCATA/CACCAT`	2	--	ds500¹		0	--	--	--	--
rs148165034^1,2	C	--	5822074(+)	`TTACT-/AACAACAG`	2	--	ds500¹		0	--	--	--	--
rs3836552^1,2	C	--	5822075(+)	`TAACA-/ACAGCTAA`	2	--	ds500¹		0	--	--	--	--
rs146593209^1,2	C	--	5822119(+)	`TTATCC/TGTCCT`	2	--	ds500¹		0	--	--	--	--
rs189216712^1,2		--	5822169(+)	`GTGAAC/GTTTAG`	2	--	ds500¹		0	--	--	--	--
rs115145516^1,2	C	--	5822257(+)	`AATCAA/GTGCAA`	2	--	ds500¹		0	--	--	--	--
rs149849981^1,2		--	5822274(+)	`AGCCTA/GTTTTG`	2	--	ds500¹		0	--	--	--	--
rs114570348^1,2	F	--	5822443(+)	`CACGCG/AGGGGG`	2	--	ds500¹		1		WA	118
rs148818631^1,2	C	--	5822460(+)	`AAGCAG/TTCGTA`	2	--	ds500¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for CRMP1 (5749811 - 5894785 bp)

Structural Variations
Database of Genomic Variants (DGV) 10/11 variations for CRMP1 (see all 11): About this table

Variant ID	Type	Subtype	PubMed ID
esv2678074	CNV	Deletion	23128226
esv2726979	CNV	Deletion	23290073
esv2726978	CNV	Deletion	23290073
esv2279377	CNV	Deletion	18987734
nsv293630	CNV	Loss	16902084
nsv829845	CNV	Loss	17160897
esv7115	CNV	Loss	19470904
nsv822449	CNV	Gain	20364138
nsv829844	CNV	Gain	17160897
esv29375	CNV	Gain+Loss	19812545

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

CRMP1 for disorders           About GeneDecksing

OMIM gene information: 602462    OMIM disorders: --

10 diseases for CRMP1:    About MalaCards

ellis-van creveld syndrome lung adenocarcinoma macular degeneration down syndrome

ataxia adenocarcinoma tuberculosis lung cancer

leukemia neuronitis

3 Novoseek inferred disease relationships for CRMP1 gene About this table

Disease	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
cancer lung	33.9	3	11562390 (3)
metastasis	16.9	4	11562390 (2), 12650609 (1), 14996858 (1)
cancer	7.58	4	12650609 (2), 18524846 (1), 11562390 (1)

Genetic Association Database (GAD): CRMP1
Human Genome Epidemiology (HuGE) Navigator: CRMP1 (2 documents)

Export disorders for CRMP1 gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for CRMP1 gene, integrated from 9 sources (see all 45):
(articles sorted by number of sources associating them with CRMP1)

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A novel gene family defined by human dihydropyrimidinase and three related proteins with differential tissue distribution. (PubMed id 8973361)^{1, 2, 3, 9} Hamajima N.... Nonaka M. (1996)
Collapsin response mediator protein-1 and the invasion and metastasis of cancer cells. (PubMed id 11562390)^{1, 2, 9} Shih J.-Y.... Yang P.-C. (2001)
Genomic organization and localization of the human CRMP-1 gene. (PubMed id 10048489)^{1, 2, 9} Torres R. and Polymeropoulos M.H. (1998)
Long form collapsin response mediator protein-1 (LCRM P-1) expression is associated with clinical outcome and lymph node metastasis i n non-small cell lung cancer patients. (PubMed id 19362386)^{1, 2, 9} Pan S.H....Yang P.C. (2010)
Association between genes on chromosome 4p16 and non- syndromic oral clefts in four populations. (PubMed id 20087401)^{1, 4} Ingersoll R.G....Beaty T.H. (2010)
Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)^{1, 4} Rose J.E....Uhl G.R. (2010)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S....Malek J. (2004)
Modulation of the expression of the invasion-suppressor CRMP-1 by cyclooxygenase-2 inhibition via reciprocal regulation of Sp1 and C/EBPalpha. (PubMed id 18524846)^{1, 9} Wu C.C....Yang P.C. (2008)
Loss of collapsin response mediator Protein1, as dete cted by iTRAQ analysis, promotes invasion of human gliomas expressing mutant EG FRvIII. (PubMed id 19903856)^{1, 9} Mukherjee J....Guha A. (2009)
Haplotype and linkage disequilibrium analysis of the CRMP1 and EVC genes. (PubMed id 15492864)^{1, 9} Sivakumaran T.A. and Lesperance M.M. (2004)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Disorders
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 1400	HGNC: 2365	AceView: CRMP1	Ensembl:ENSG00000072832	euGenes: HUgn1400
ECgene: CRMP1	H-InvDB: CRMP1

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for CRMP1	Pharmacogenomics, SNPs, Pathways
ATLAS Chromosomes in Cancer entry for CRMP1	Genetics and Cytogenetics in Oncology and Haematology

Intellectual Property for CRMP1 gene
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Patent Information for CRMP1 gene:
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GeneCards and IP:
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Collapsin Response Mediator Protein 1

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