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Aliases & Descriptions for CRK
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Descriptions Adapter molecule crk 3 avian sarcoma virus CT10 (v-crk) oncogene homolog 2 v-crk avian sarcoma virus CT10 oncogene homolog 1 , 2 v-crk sarcoma virus CT10 oncogene homolog 2 v-crk sarcoma virus CT10 oncogene homolog (avian) 2
Search outside databases for aliases for CRK genePrevious GC identifers: GC17M001318 GC17M001659 GC17M001533 GC17M001534
Summaries for CRK (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for CRK : This gene encodes a member of an adapter protein family that binds to severaltyrosine-phosphorylated proteins. The product of this gene has several SH2 and SH3 domains(src-homology domains) and is involved in several signaling pathways, recruiting cytoplasmicproteins in the vicinity of tyrosine kinase through SH2-phosphotyrosine interaction. TheN-terminal SH2 domain of this protein functions as a positive regulator of transformation whereasthe C-terminal SH3 domain functions as a negative regulator of transformation. Two alternativetranscripts encoding different isoforms with distinct biological activity have been described.[provided by RefSeq] UniProtKB/Swiss-Prot: CRK_HUMAN, P46108 Function : The Crk-I and Crk-II forms differ in their biological activities. Crk-II has lesstransforming activity than Crk-I. Crk-II mediates attachment-induced MAPK8 activation, membraneruffling and cell motility in a Rac-dependent manner. Involved in phagocytosis of apoptotic cellsand cell motility via its interaction with DOCK1 and DOCK4
Gene Wiki entry for CRK
Genomic Location for CRK
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the CRK gene Entrez Gene cytogenetic band: 17p13.3 Ensembl cytogenetic band: 17p13.3 HGNC cytogenetic band: 17p13 CRK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17M001272:
(about GC identifiers )
Start:
1,272,190 bp from pter
End:
1,306,294 bp from pter
Size:
34,105 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000017.9 NT_010718.15 Proteins for CRK
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: CRK_HUMAN, P46108 (See
protein sequence )Recommended Name: Proto-oncogene C-crk Size : 304 amino acids; 33831 Da
Subunit : Interacts with ABL1, C3G, SOS, MAP4K1, MAPK8 and DOCK3 via its first SH3 domain. Interactswith BCAR1, CBL, CBLB, PXN, IRS4 and GAB1 via its SH2 domain upon stimulus-induced tyrosinephosphorylation. Interacts with several tyrosine-phosphorylated growth factor receptors such asEGFR, PDGFR and INSR via its SH2 domain (By similarity). Interacts with DOCK1 and DOCK4. Interactswith SHB
Subcellular location : Cytoplasm (By similarity). Cell membrane (By similarity). Note=Translocatedto the plasma membrane upon cell adhesion (By similarity)
PDB structures from and Proteopedia : 1JU5 (3D)
 2DVJ (3D)
 2EYV (3D)
 2EYW (3D)
 2EYX (3D)
 2EYY (3D)
 2EYZ (3D)
 
Secondary accessions : Q96HJ0Alternative splicing : 2 isoforms : P46108-1 P46108-2
Post-translational modifications:
Phosphorylation of Crk-II (40 kDa) gives rise to a 42 kDa form1
Phosphorylated on Tyr-221 upon cell adhesion. Results in the negative regulation of the associationwith SH2- and SH3-binding partners, possibly by the formation of an intramolecular interaction ofphosphorylated Tyr-221 with the SH2 domain. This leads finally to the down-regulation of the Crksignaling pathway1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_005197.3 NP_058431.2 ENSEMBL proteins: ENSP00000381942 ENSP00000300574 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): CRK 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for CRK: Assays for CRK:
Protein
Domains/ Families for CRK(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P46108 ProtoNet protein and cluster: P46108
3 Blocks protein families : IPB000980 SH2 domain signature IPB001452 SH3 domain signature IPB011511 Variant SH3 UniProtKB/Swiss-Prot: CRK_HUMAN, P46108 Domain : The C-terminal SH3 domain function as a negative modulator for transformation and theN-terminal SH3 domain appears to function as a positive regulator for transformation (Bysimilarity) Domain : The SH2 domain mediates interaction with SHBSimilarity : Contains 1 SH2 domainSimilarity : Contains 2 SH3 domains
Gene Function for CRK
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_005206 Applied Biosystems Silencer ® siRNAs for CRK Sigma-Aldrich siRNA for CRK Sigma-Aldrich shRNA for CRK Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_005206                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_005206                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_005206  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_016823 UniProtKB/Swiss-Prot: CRK_HUMAN, P46108 Function : The Crk-I and Crk-II forms differ in their biological activities. Crk-II has lesstransforming activity than Crk-I. Crk-II mediates attachment-induced MAPK8 activation, membraneruffling and cell motility in a Rac-dependent manner. Involved in phagocytosis of apoptotic cellsand cell motility via its interaction with DOCK1 and DOCK4
Genatlas biochemistry entry for CRK :avian sarcoma virus CT10 (v-crk) homolog
11 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Crk) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for CRK
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/17 Sigma-Aldrich "Your Favorite Gene" Pathways for CRK (Your Favorite Gene powered by Ingenuity) (see all 17
) Gene Network CentralTM Interacting Genes and Proteins Network for CRK 5/278 Interacting proteins for CRK (ENSP00000300574 3 P46108 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 278
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for CRK (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for CRK 10/13 Novoseek chemical compound relationships for CRK gene (see all 13
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
78.24
145
12799422 (6), 9195921 (5), 18835194 (4), 8524328 (4) (see all 74 )
phosphotyrosine
63.52
2
11695992 (1), 15525532 (1)
phosphatidylinositol
60.00
17
14640702 (2), 15581361 (2), 10531310 (1), 9837978 (1) (see all 13 )
phenylalanine
32.62
4
9546424 (1), 12799422 (1), 11316748 (1), 9564038 (1)
proline
26.45
4
11080615 (2), 12955086 (1)
gtp
25.69
3
12054111 (1), 9268367 (1), 12198159 (1)
threonine
25.31
1
9891069 (1)
sphingosine
13.56
1
9195921 (1)
phosphoinositide
11.12
1
15883038 (1)
atp
0.00
1
15634006 (1)
About this table
Transcripts for CRK(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_005206 Sigma-Aldrich siRNA for CRK Sigma-Aldrich shRNA for CRK Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_005206 NM_016823
REFSEQ mRNAs for CRK gene (2 alternative transcripts): NM_005206.3 NM_016823.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_005206 NM_016823
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_005206                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_005206                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_005206  
Additional cDNA sequence: AK291060.1 BC001718.1 BC008506.1 BC009837.1 BT007277.1 CR590790.1 CR600568.1 D10656.1
10 DOTS entries : DT.450328 DT.100779280 DT.100721097 DT.95171032 DT.86849048 DT.120966123 DT.100716778 DT.91751135 DT.120966099 DT.91751133
24/68 AceView cDNA sequences (see all 68
):BI862427 BM313846 AI090527 AI203558 BF794728 AA625795 AB067523 CF138637 BE079546 BM005955 AK092149 AI190661 CK822353 AX747382 BM467173 AW183830 BU501498 AA425067 AW069001 AL137345 CA449507 AV684422 AI215115 BU552965
highest scoring ESTs for CRK :D10656 AA852942 AI085745 AL552288 AU116937 AU125411 AU135266 AU138629 BC001718 BC008506
Unigene Cluster for CRK: V-crk sarcoma virus CT10 oncogene homolog (avian) Hs.638121 [show with all ESTs ] Unigene Representative Sequence: BC008506 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for CRK ExUns: 1 ^ 2a · 2b ^ 3a · 3b SP1 :     -       SP2 :          
About this scheme ECgene alternative splicing isoforms for CRK 2 Ensembl transcripts including schematic representations : ENST00000398970
ENST00000300574
Expression for CRK
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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CRK expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for CRK 1 / 2 / 3
9 probe-sets matching CRK gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AATTTGGGGTSOURCE GeneReport for Unigene cluster: Hs.638121
Orthologs for CRK
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for CRK gene from 5/12 species (see all 12
)
About this table Species with no ortholog for CRK ENSEMBL Gene Tree for CRK Paralogs for CRK (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for CRK gene CRKL 2
SNPs/Variants for CRK (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for CRK (up to first 250kb)
Disorders & Mutations for CRK
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 164762 9 Novoseek disease relationships for CRK gene
About this table Human Genome Epidemiology Navigator: CRK (1 document)Tumor Gene Database : CRK
Medical News for CRK (Possibly Related Articles in
Doctor's Guide )
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--
Publications for CRK (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/296 PubMed articles for CRK gene (see all 296
): Interplay of the proto-oncogene proteins CrkL and CrkII in insulin-like growth factor-I receptor-mediated signal transduction. (PubMed id 9614078) 1, 3, 4 Koval A.P....LeRoith D. (1998) Interaction between the amino-terminal SH3 domain of CRK and its natural target proteins. (PubMed id 8662907) 1, 3, 4 Matsuda M.... Kurata T. (1996) Two species of human CRK cDNA encode proteins with distinct biological activities. (PubMed id 1630456) 1, 3, 4 Matsuda M.... Shibuya M. (1992) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) DOCK4, a GTPase activator, is disrupted during tumorigenesis. (PubMed id 12628187) 3, 4 Yajnik V....Haber D.A. (2003) Structure of a regulatory complex involving the Abl SH3 domain, the Crk SH2 domain, and a Crk-derived phosphopeptide. (PubMed id 12384576) 3, 4 Donaldson L.W.... Forman-Kay J.D. (2002) NGF-dependent neurite outgrowth in PC12 cells overexpressing the Src homology 2-domain protein shb requires activation of the Rap1 pathway. (PubMed id 10964504) 3, 4 Lu L.... Welsh M. (2000) DOCK180, a major CRK-binding protein, alters cell morphology upon translocation to the cell membrane. (PubMed id 8657152) 3, 4 Hasegawa H.... Matsuda M. (1996) CRK proto-oncogene maps to human chromosome band 17p13. (PubMed id 8378094) 3, 4 Fioretos T.... Morris C. (1993)
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Genome Databases showing CRK
(According to
Entrez Gene ,
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing CRK
(According to HUGE )
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Specialized Databases showing CRK (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for CRK (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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