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Aliases for CRISP1 Gene

Aliases for CRISP1 Gene

  • Cysteine Rich Secretory Protein 1 2 3 5
  • Acidic Epididymal Glycoprotein Homolog 3 4
  • Acidic Epididymal Glycoprotein-Like 1 2 3
  • AEG-Like Protein 3 4
  • CRISP-1 3 4
  • AEGL1 3 4
  • ARP 3 4
  • Cysteine-Rich Secretory Protein-1 Delta 3
  • Epididymis Secretory Protein Li 57 3
  • Cysteine-Rich Secretory Protein 1 3
  • AEG-Related Protein 3
  • HSCRISP1D 3
  • HSCRISP1G 3
  • HEL-S-57 3
  • HUMARP 3

External Ids for CRISP1 Gene

Previous HGNC Symbols for CRISP1 Gene

  • AEGL1

Previous GeneCards Identifiers for CRISP1 Gene

  • GC06M049803
  • GC06M049848
  • GC06M049532

Summaries for CRISP1 Gene

Entrez Gene Summary for CRISP1 Gene

  • Fertilization consists of a sequence of specific cell-cell interactions culminating in the fusion of the sperm and egg plasma membranes. Recognition, binding, and fusion occur through the interaction of complementary molecules that are localized to specific domains of the sperm and egg plasma membranes. In the sperm, the postacrosomal region or equatorial segment is involved in sperm-egg plasma membrane fusion. The protein encoded by this gene is a member of the cysteine-rich secretory protein (CRISP) family. It is expressed in the epididymis, is secreted into the epididymal lumen, and binds to the postacrosomal region of the sperm head, where it plays a role in sperm-egg fusion. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]

GeneCards Summary for CRISP1 Gene

CRISP1 (Cysteine Rich Secretory Protein 1) is a Protein Coding gene. GO annotations related to this gene include calcium channel regulator activity. An important paralog of this gene is CRISP2.

UniProtKB/Swiss-Prot for CRISP1 Gene

  • May have a role in sperm-egg fusion and maturation.

Gene Wiki entry for CRISP1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRISP1 Gene

Genomics for CRISP1 Gene

Regulatory Elements for CRISP1 Gene

Enhancers for CRISP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F049888 0.2 ENCODE 0.4 -11.8 -11787 0.2 PKNOX1 ATF1 ARNT CREB3L1 ELK1 GATA2 NCOA1 REST MBD2 MEF2D CRISP1 GC06P049919
GH06F049908 0.5 ENCODE 0.3 -32.4 -32398 1.7 ZNF316 SMARCA4 MAFK GLYATL3 MUT GC06P049919 CRISP1
GH06F049911 0.7 ENCODE 0.3 -34.5 -34548 0.7 DEFB112 GC06P049919 CRISP1
GH06F049918 0.2 ENCODE 0.2 -41.9 -41907 0.2 SMARCA4 GC06P049919 CRISP1
GH06F049826 0.2 ENCODE 0.2 +49.9 49896 1.2 SMARCA5 BRD4 IRF2 MTA2 ARNT ZMYM3 TBX21 CHAMP1 ZNF316 POLR2A PGK2 CRISP3 LOC101927020 LOC101927048 CRISP1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CRISP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CRISP1 Gene

Chromosome:
6
Start:
49,834,257 bp from pter
End:
49,877,096 bp from pter
Size:
42,840 bases
Orientation:
Minus strand

Genomic View for CRISP1 Gene

Genes around CRISP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRISP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRISP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRISP1 Gene

Proteins for CRISP1 Gene

  • Protein details for CRISP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P54107-CRIS1_HUMAN
    Recommended name:
    Cysteine-rich secretory protein 1
    Protein Accession:
    P54107
    Secondary Accessions:
    • B5BU98
    • O00698
    • Q13248
    • Q14082
    • Q96SF6

    Protein attributes for CRISP1 Gene

    Size:
    249 amino acids
    Molecular mass:
    28481 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for CRISP1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CRISP1 Gene

Post-translational modifications for CRISP1 Gene

  • Glycosylation at Asn 230
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for CRISP1 Gene

Domains & Families for CRISP1 Gene

Suggested Antigen Peptide Sequences for CRISP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P54107

UniProtKB/Swiss-Prot:

CRIS1_HUMAN :
  • Contains 1 SCP domain.
  • Belongs to the CRISP family.
Domain:
  • Contains 1 SCP domain.
  • Contains 1 ShKT domain.
Family:
  • Belongs to the CRISP family.
genes like me logo Genes that share domains with CRISP1: view

No data available for Gene Families for CRISP1 Gene

Function for CRISP1 Gene

Molecular function for CRISP1 Gene

UniProtKB/Swiss-Prot Function:
May have a role in sperm-egg fusion and maturation.

Gene Ontology (GO) - Molecular Function for CRISP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005246 calcium channel regulator activity IEA --
genes like me logo Genes that share ontologies with CRISP1: view
genes like me logo Genes that share phenotypes with CRISP1: view

Animal Models for CRISP1 Gene

MGI Knock Outs for CRISP1:

Animal Model Products

  • Taconic Biosciences Mouse Models for CRISP1

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for CRISP1 Gene

Localization for CRISP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CRISP1 Gene

Note=Located in the lumen and epithelium of distal ductus efferentes and epididymal ducts, and on the postacrosomal region of the sperm head.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CRISP1 Gene COMPARTMENTS Subcellular localization image for CRISP1 gene
Compartment Confidence
extracellular 5
nucleus 5
plasma membrane 1

Gene Ontology (GO) - Cellular Components for CRISP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005615 extracellular space TAS 8543280
GO:0005634 nucleus IDA 21630459
genes like me logo Genes that share ontologies with CRISP1: view

Pathways & Interactions for CRISP1 Gene

SuperPathways for CRISP1 Gene

No Data Available

Interacting Proteins for CRISP1 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000338276%0d%0a9606.ENSP00000280527%0d%0a
Selected Interacting proteins: ENSP00000338276 P54107-CRIS1_HUMAN for CRISP1 Gene via STRING IID

Gene Ontology (GO) - Biological Process for CRISP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007339 binding of sperm to zona pellucida IEA --
GO:0007342 fusion of sperm to egg plasma membrane TAS 8838800
GO:0060046 regulation of acrosome reaction IEA --
genes like me logo Genes that share ontologies with CRISP1: view

No data available for Pathways by source and SIGNOR curated interactions for CRISP1 Gene

Drugs & Compounds for CRISP1 Gene

(2) Drugs for CRISP1 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(1) Additional Compounds for CRISP1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with CRISP1: view

Transcripts for CRISP1 Gene

Unigene Clusters for CRISP1 Gene

Cysteine-rich secretory protein 1:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CRISP1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8
SP1:
SP2: -

Relevant External Links for CRISP1 Gene

GeneLoc Exon Structure for
CRISP1
ECgene alternative splicing isoforms for
CRISP1

Expression for CRISP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CRISP1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CRISP1 Gene

This gene is overexpressed in Testis (x47.7).

Protein differential expression in normal tissues from HIPED for CRISP1 Gene

This gene is overexpressed in Seminal vesicle (36.3) and Prostate (32.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for CRISP1 Gene



NURSA nuclear receptor signaling pathways regulating expression of CRISP1 Gene:

CRISP1

SOURCE GeneReport for Unigene cluster for CRISP1 Gene:

Hs.109620

mRNA Expression by UniProt/SwissProt for CRISP1 Gene:

P54107-CRIS1_HUMAN
Tissue specificity: Caput, corpus, and cauda regions of the epididymis, the ductus deferens, sperm and seminal plasma.
genes like me logo Genes that share expression patterns with CRISP1: view

Primer Products

No data available for Protein tissue co-expression partners for CRISP1 Gene

Orthologs for CRISP1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CRISP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CRISP1 34 35
  • 99.33 (n)
dog
(Canis familiaris)
Mammalia CRISP1 34 35
  • 77.46 (n)
cow
(Bos Taurus)
Mammalia CRISP1 34 35
  • 76.65 (n)
rat
(Rattus norvegicus)
Mammalia Crisp4 34
  • 71.62 (n)
mouse
(Mus musculus)
Mammalia Crisp4 34 16 35
  • 71.51 (n)
oppossum
(Monodelphis domestica)
Mammalia CRISP1 35
  • 47 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CRISP1 35
  • 46 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 40 (a)
OneToMany
-- 35
  • 38 (a)
OneToMany
-- 35
  • 36 (a)
OneToMany
-- 35
  • 35 (a)
OneToMany
-- 35
  • 35 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii CRISP3 35
  • 38 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 25 (a)
ManyToMany
CSA.10077 35
  • 14 (a)
ManyToMany
Species where no ortholog for CRISP1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CRISP1 Gene

ENSEMBL:
Gene Tree for CRISP1 (if available)
TreeFam:
Gene Tree for CRISP1 (if available)

Paralogs for CRISP1 Gene

(3) SIMAP similar genes for CRISP1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CRISP1: view

Variants for CRISP1 Gene

Sequence variations from dbSNP and Humsavar for CRISP1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs10046360 -- 49,873,635(+) AGAGT(A/T)ATTTA intron-variant
rs10456628 -- 49,870,262(+) ggatg(C/T)caaca intron-variant
rs10498779 -- 49,833,899(+) ATTTC(A/G)GCTAT downstream-variant-500B
rs1053497 -- 49,835,089(-) TCATG(C/T)GATTT utr-variant-3-prime
rs1084051 -- 49,867,622(-) CTTTA(A/G)CAAGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CRISP1 Gene

Variant ID Type Subtype PubMed ID
esv3608949 CNV loss 21293372
esv3608951 CNV loss 21293372
esv3608952 CNV gain 21293372
esv3608953 CNV gain 21293372
nsv5294 CNV deletion 18451855

Variation tolerance for CRISP1 Gene

Residual Variation Intolerance Score: 91.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.30; 53.20% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CRISP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CRISP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CRISP1 Gene

Disorders for CRISP1 Gene

Relevant External Links for CRISP1

Genetic Association Database (GAD)
CRISP1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CRISP1

No disorders were found for CRISP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CRISP1 Gene

Publications for CRISP1 Gene

  1. Characterization of a human glycoprotein with a potential role in sperm-egg fusion: cDNA cloning, immunohistochemical localization, and chromosomal assignment of the gene (AEGL1). (PMID: 8838800) Hayashi M. … Kasahara M. (Genomics 1996) 2 3 4 22 64
  2. The human cysteine-rich secretory protein (CRISP) family. Primary structure and tissue distribution of CRISP-1, CRISP-2 and CRISP-3. (PMID: 8665901) Kraetzschmar J. … Schleuning W.-D. (Eur. J. Biochem. 1996) 3 4 22 64
  3. Analysis of the human acidic epididymal glycoprotein-like molecule: isolation of cDNA and tissue localization. (PMID: 8543280) Hayashi M. (Hokkaido Igaku Zasshi 1995) 3 4 22 64
  4. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4 64
  5. The molecular basis of sperm-oocyte membrane interactions during mammalian fertilization. (PMID: 12206465) Evans J.P. (Hum. Reprod. Update 2002) 3 22 64

Products for CRISP1 Gene

Sources for CRISP1 Gene

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