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Aliases for CRHR1-IT1 Gene

Subcategory (RNA class) for CRHR1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CRHR1-IT1 Gene

  • CRHR1 Intronic Transcript 1 2 3 4
  • CRHR1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • C17orf69 3 4
  • Chromosome 17 Open Reading Frame 69 2

External Ids for CRHR1-IT1 Gene

Previous Symbols for CRHR1-IT1 Gene

  • C17orf69

Summaries for CRHR1-IT1 Gene

GeneCards Summary for CRHR1-IT1 Gene

CRHR1-IT1 (CRHR1 Intronic Transcript 1) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRHR1-IT1 Gene

Genomics for CRHR1-IT1 Gene

Genomic Location for CRHR1-IT1 Gene

Start:
45,620,328 bp from pter
End:
45,648,216 bp from pter
Size:
27,889 bases
Orientation:
Plus strand

Genomic View for CRHR1-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CRHR1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRHR1-IT1 Gene

No data available for Regulatory Elements for CRHR1-IT1 Gene

Proteins for CRHR1-IT1 Gene

  • Protein details for CRHR1-IT1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LR1-CRIT1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by CRHR1-IT1
    Protein Accession:
    Q96LR1
    Secondary Accessions:
    • C9JG53

    Protein attributes for CRHR1-IT1 Gene

    Size:
    157 amino acids
    Molecular mass:
    16895 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CRHR1-IT1 Gene

Proteomics data for CRHR1-IT1 Gene at MOPED

Post-translational modifications for CRHR1-IT1 Gene

No data available for DME Specific Peptides for CRHR1-IT1 Gene

Domains for CRHR1-IT1 Gene

Gene Families for CRHR1-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for CRHR1-IT1 Gene

ProtoNet:
genes like me logo Genes that share domains with CRHR1-IT1: view

No data available for UniProtKB/Swiss-Prot for CRHR1-IT1 Gene

Function for CRHR1-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CRHR1-IT1 Gene

Localization for CRHR1-IT1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CRHR1-IT1 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for CRHR1-IT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with CRHR1-IT1: view

Pathways for CRHR1-IT1 Gene

SuperPathways for CRHR1-IT1 Gene

No Data Available

Interacting Proteins for CRHR1-IT1 Gene

Gene Ontology (GO) - Biological Process for CRHR1-IT1 Gene

None

No data available for Pathways by source for CRHR1-IT1 Gene

Transcripts for CRHR1-IT1 Gene

mRNA/cDNA for CRHR1-IT1 Gene

Unigene Clusters for CRHR1-IT1 Gene

CRHR1 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CRHR1-IT1 Gene

No ASD Table

Relevant External Links for CRHR1-IT1 Gene

GeneLoc Exon Structure for
CRHR1-IT1
ECgene alternative splicing isoforms for
CRHR1-IT1

Expression for CRHR1-IT1 Gene

mRNA expression in normal human tissues for CRHR1-IT1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CRHR1-IT1 Gene

SOURCE GeneReport for Unigene cluster for CRHR1-IT1 Gene Hs.128813

genes like me logo Genes that share expressions with CRHR1-IT1: view

Orthologs for CRHR1-IT1 Gene

Evolution for CRHR1-IT1 Gene

ENSEMBL:
Gene Tree for CRHR1-IT1 (if available)
TreeFam:
Gene Tree for CRHR1-IT1 (if available)

No data available for Orthologs for CRHR1-IT1 Gene

Paralogs for CRHR1-IT1 Gene

No data available for Paralogs for CRHR1-IT1 Gene

Variants for CRHR1-IT1 Gene

Sequence variations from dbSNP and Humsavar for CRHR1-IT1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
VAR_032284 -

Relevant External Links for CRHR1-IT1 Gene

HapMap Linkage Disequilibrium report
CRHR1-IT1

No data available for Structural Variations from Database of Genomic Variants (DGV) for CRHR1-IT1 Gene

Disorders for CRHR1-IT1 Gene

No disorders were found for CRHR1-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for CRHR1-IT1 Gene

Publications for CRHR1-IT1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Genome-wide association study reveals genetic risk underlying Parkinson's disease. (PMID: 19915575) SimA^n-SA!nchez J. … Gasser T. (Nat. Genet. 2009) 3
  3. Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies. (PMID: 21292315) . … Wood N.W. (Lancet 2011) 3
  4. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for CRHR1-IT1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CRHR1-IT1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CRHR1-IT1
    • Block miRNA regulation of CRHR1-IT1 using miScript Target Protectors

    Sources for CRHR1-IT1 Gene

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