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Aliases for CRELD2 Gene

Aliases for CRELD2 Gene

  • Cysteine-Rich With EGF-Like Domains 2 2 3

External Ids for CRELD2 Gene

Previous GeneCards Identifiers for CRELD2 Gene

  • GC22P048634
  • GC22P048698
  • GC22P050311
  • GC22P033259

Summaries for CRELD2 Gene

GeneCards Summary for CRELD2 Gene

CRELD2 (Cysteine-Rich With EGF-Like Domains 2) is a Protein Coding gene. Diseases associated with CRELD2 include cannabis dependence and multiple epiphyseal dysplasia. GO annotations related to this gene include calcium ion binding. An important paralog of this gene is CRELD1.

UniProtKB/Swiss-Prot for CRELD2 Gene

  • May regulate transport of alpha4-beta2 neuronal acetylcholine receptor

Gene Wiki entry for CRELD2 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRELD2 Gene

Genomics for CRELD2 Gene

Regulatory Elements for CRELD2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CRELD2 Gene

Start:
49,918,167 bp from pter
End:
49,927,540 bp from pter
Size:
9,374 bases
Orientation:
Plus strand

Genomic View for CRELD2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CRELD2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRELD2 Gene

Proteins for CRELD2 Gene

  • Protein details for CRELD2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXH1-CREL2_HUMAN
    Recommended name:
    Cysteine-rich with EGF-like domain protein 2
    Protein Accession:
    Q6UXH1
    Secondary Accessions:
    • A5GZA2
    • A5GZA3
    • A5GZA4
    • A5GZA5
    • A5GZA6
    • Q4W0V0
    • Q86UC0
    • Q9BU47

    Protein attributes for CRELD2 Gene

    Size:
    353 amino acids
    Molecular mass:
    38192 Da
    Quaternary structure:
    • May interact with CHRNA4

    Alternative splice isoforms for CRELD2 Gene

neXtProt entry for CRELD2 Gene

Proteomics data for CRELD2 Gene at MOPED

Post-translational modifications for CRELD2 Gene

  • Glycosylation at Thr58, Asn190, and Asn251
  • Modification sites at PhosphoSitePlus

Other Protein References for CRELD2 Gene

Antibody Products

No data available for DME Specific Peptides for CRELD2 Gene

Domains for CRELD2 Gene

Suggested Antigen Peptide Sequences for CRELD2 Gene

Graphical View of Domain Structure for InterPro Entry

Q6UXH1

UniProtKB/Swiss-Prot:

CREL2_HUMAN :
  • Q6UXH1
Domain:
  • Contains 2 EGF-like domains.
Family:
  • Belongs to the CRELD family.
Similarity:
  • Contains 2 FU (furin-like) repeats.
genes like me logo Genes that share domains with CRELD2: view

No data available for Gene Families for CRELD2 Gene

Function for CRELD2 Gene

Molecular function for CRELD2 Gene

UniProtKB/Swiss-Prot Function: May regulate transport of alpha4-beta2 neuronal acetylcholine receptor

Gene Ontology (GO) - Molecular Function for CRELD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005509 calcium ion binding IEA --
GO:0005515 protein binding IPI 21988832
genes like me logo Genes that share ontologies with CRELD2: view

Phenotypes for CRELD2 Gene

GenomeRNAi human phenotypes for CRELD2:
genes like me logo Genes that share phenotypes with CRELD2: view

Animal Model Products

CRISPR Products

miRNA for CRELD2 Gene

miRTarBase miRNAs that target CRELD2

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for CRELD2 Gene

Localization for CRELD2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CRELD2 Gene

Secreted. Endoplasmic reticulum.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CRELD2 Gene COMPARTMENTS Subcellular localization image for CRELD2 gene
Compartment Confidence
endoplasmic reticulum 5
extracellular 3
golgi apparatus 2
plasma membrane 1

Gene Ontology (GO) - Cellular Components for CRELD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IEA --
GO:0005783 endoplasmic reticulum IEA --
GO:0005794 Golgi apparatus IEA --
genes like me logo Genes that share ontologies with CRELD2: view

Pathways for CRELD2 Gene

SuperPathways for CRELD2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CRELD2 Gene

None

No data available for Pathways by source for CRELD2 Gene

Transcripts for CRELD2 Gene

Unigene Clusters for CRELD2 Gene

Cysteine-rich with EGF-like domains 2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CRELD2

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CRELD2 Gene

ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13
SP1: - - - - -
SP2: - - - - - -
SP3: - - - -
SP4: - -
SP5: - -
SP6: - - - - -
SP7:

Relevant External Links for CRELD2 Gene

GeneLoc Exon Structure for
CRELD2
ECgene alternative splicing isoforms for
CRELD2

Expression for CRELD2 Gene

mRNA expression in normal human tissues for CRELD2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for CRELD2 Gene

SOURCE GeneReport for Unigene cluster for CRELD2 Gene Hs.211282

mRNA Expression by UniProt/SwissProt for CRELD2 Gene

Q6UXH1-CREL2_HUMAN
Tissue specificity: Ubiquitously expressed.
genes like me logo Genes that share expressions with CRELD2: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for CRELD2 Gene

Orthologs for CRELD2 Gene

This gene was present in the common ancestor of animals.

Orthologs for CRELD2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CRELD2 35
  • 99.42 (n)
  • 99.5 (a)
CRELD2 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CRELD2 35
  • 80.68 (n)
  • 79.28 (a)
CRELD2 36
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CRELD2 35
  • 77.78 (n)
  • 77.24 (a)
CRELD2 36
  • 81 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Creld2 35
  • 79.2 (n)
  • 77.68 (a)
Creld2 16
Creld2 36
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CRELD2 36
  • 58 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Creld2 35
  • 78.59 (n)
  • 78.59 (a)
chicken
(Gallus gallus)
Aves CRELD2 35
  • 63.49 (n)
  • 62.46 (a)
CRELD2 36
  • 56 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CRELD2 36
  • 55 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.24289 35
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100497878 35
  • 59.12 (n)
  • 59.02 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9635 35
zebrafish
(Danio rerio)
Actinopterygii creld2 35
  • 58.9 (n)
  • 57.28 (a)
creld2 36
  • 49 (a)
OneToOne
zgc66383 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP007968 35
  • 55.86 (n)
  • 44.14 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG11377 35
  • 54.74 (n)
  • 45.38 (a)
CG11377 36
  • 28 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea F09E8.2 35
  • 48.47 (n)
  • 42.36 (a)
F09E8.2 36
  • 28 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11106 36
  • 32 (a)
OneToMany
Species with no ortholog for CRELD2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CRELD2 Gene

ENSEMBL:
Gene Tree for CRELD2 (if available)
TreeFam:
Gene Tree for CRELD2 (if available)

Paralogs for CRELD2 Gene

Paralogs for CRELD2 Gene

Selected SIMAP similar genes for CRELD2 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with CRELD2: view

Variants for CRELD2 Gene

Sequence variations from dbSNP and Humsavar for CRELD2 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs1608 -- 49,927,295(-) TCTTC(A/G)CGGGA reference, synonymous-codon, nc-transcript-variant
rs3204132 -- 49,927,268(+) GAAGG(A/G)GAAAG reference, synonymous-codon, nc-transcript-variant
rs7284417 -- 49,920,698(+) GTGCC(A/G)AGGGA intron-variant
rs7287579 -- 49,927,975(+) CGTTC(C/T)GGGGG downstream-variant-500B
rs7290751 -- 49,924,664(+) GACCC(C/T)GGTGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CRELD2 Gene

Variant ID Type Subtype PubMed ID
dgv5046n71 CNV Loss 21882294
nsv915495 CNV Loss 21882294
dgv5049n71 CNV Loss 21882294
nsv471221 CNV Loss 18288195
nsv915506 CNV Loss 21882294
dgv5050n71 CNV Loss 21882294
nsv915508 CNV Loss 21882294
nsv915512 CNV Gain 21882294
dgv5051n71 CNV Loss 21882294
esv2724722 CNV Deletion 23290073

Relevant External Links for CRELD2 Gene

HapMap Linkage Disequilibrium report
CRELD2
Human Gene Mutation Database (HGMD)
CRELD2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CRELD2 Gene

Disorders for CRELD2 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (3) Diseases for CRELD2 Gene including...

Search for CRELD2 Gene in MalaCards »

(2) University of Copenhagen DISEASES for CRELD2 Gene

Relevant External Links for CRELD2

Genetic Association Database (GAD)
CRELD2
genes like me logo Genes that share disorders with CRELD2: view

No data available for UniProtKB/Swiss-Prot for CRELD2 Gene

Publications for CRELD2 Gene

  1. CRELD2: gene mapping, alternate splicing, and comparative genomic identification of the promoter region. (PMID: 16919896) Maslen C.L. … Olson S.B. (Gene 2006) 3 4 23
  2. Identification, genomic organization and mRNA expression of CRELD1, the founding member of a unique family of matricellular proteins. (PMID: 12137942) Rupp P.A. … Maslen C.L. (Gene 2002) 2 3
  3. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3 4
  4. Signal peptide prediction based on analysis of experimentally verified cleavage sites. (PMID: 15340161) Zhang Z. … Henzel W.J. (Protein Sci. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for CRELD2 Gene

Sources for CRELD2 Gene

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