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Aliases for CRAT37 Gene

Subcategory (RNA class) for CRAT37 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for CRAT37 Gene

  • Cervical Cancer-Associated Transcript 37 3 5

External Ids for CRAT37 Gene

Summaries for CRAT37 Gene

GeneCards Summary for CRAT37 Gene

CRAT37 (Cervical Cancer-Associated Transcript 37) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for CRAT37 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRAT37 Gene

Genomics for CRAT37 Gene

Regulatory Elements for CRAT37 Gene

Enhancers for CRAT37 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H091559 0.6 FANTOM5 dbSUPER 5 +150.5 150542 0.2 CRAT37 SV2B ENSG00000258954 LOC105370973
GH15H091552 0.5 dbSUPER 5.5 +144.7 144705 2 POLR2A ZBTB21 CREB1 CRAT37 ENSG00000258954 LOC105370973
GH15H091407 0.9 Ensembl ENCODE 0.7 -1.0 -993 0.8 SMARCE1 SMARCC1 JUN DPF2 JUND CTBP1 FOS FOSL2 CRAT37 PIR40721
GH15H091408 0.9 Ensembl ENCODE 0.7 +0.2 175 0.5 HDAC1 MAX REST RAD21 YY1 JUND KLF16 IKZF1 HNF4A TRIM24 CRAT37 GC15P091451
GH15H091369 0.8 Ensembl ENCODE 0.3 -38.5 -38493 0.8 L3MBTL2 MAX MYC MGA CRAT37 PIR40721
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CRAT37 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CRAT37 Gene

Genomic Locations for CRAT37 Gene
chr15:91,408,708-91,605,211
(GRCh38/hg38)
Size:
196,504 bases
Orientation:
Plus strand
chr15:91,951,938-92,148,441
(GRCh37/hg19)

Genomic View for CRAT37 Gene

Genes around CRAT37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRAT37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRAT37 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRAT37 Gene

Proteins for CRAT37 Gene

Post-translational modifications for CRAT37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CRAT37 Gene

Domains & Families for CRAT37 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CRAT37 Gene

Function for CRAT37 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CRAT37 Gene

Localization for CRAT37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CRAT37 Gene

Pathways & Interactions for CRAT37 Gene

SuperPathways for CRAT37 Gene

No Data Available

Interacting Proteins for CRAT37 Gene

Gene Ontology (GO) - Biological Process for CRAT37 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CRAT37 Gene

Drugs & Compounds for CRAT37 Gene

No Compound Related Data Available

Transcripts for CRAT37 Gene

mRNA/cDNA for CRAT37 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CRAT37 Gene

No ASD Table

Relevant External Links for CRAT37 Gene

GeneLoc Exon Structure for
CRAT37

Expression for CRAT37 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CRAT37 Gene

Orthologs for CRAT37 Gene

Evolution for CRAT37 Gene

ENSEMBL:
Gene Tree for CRAT37 (if available)
TreeFam:
Gene Tree for CRAT37 (if available)

No data available for Orthologs for CRAT37 Gene

Paralogs for CRAT37 Gene

No data available for Paralogs for CRAT37 Gene

Variants for CRAT37 Gene

Sequence variations from dbSNP and Humsavar for CRAT37 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000123468 -- 91,483,939(+) TGACT(A/C)CCTCT intron-variant
rs1000181498 -- 91,464,414(+) TTTAA(A/G)TAGTT intron-variant
rs1000227650 -- 91,478,290(+) GGTCT(C/T)GATCT intron-variant
rs1000301321 -- 91,478,441(+) CTGGT(G/T)GCAAC intron-variant
rs1000329284 -- 91,478,709(+) CAGTG(C/T)TGTGT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for CRAT37 Gene

Disorders for CRAT37 Gene

Relevant External Links for CRAT37

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CRAT37

No disorders were found for CRAT37 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CRAT37 Gene

Publications for CRAT37 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for CRAT37 Gene

Sources for CRAT37 Gene

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