Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CRAMP1L Gene

Aliases for CRAMP1L Gene

  • Crm, Cramped-Like (Drosophila) 2 3
  • Hematological And Neurological Expressed 1-Like Protein 3 4
  • HN1L 3 4
  • Crm (Cramped Drosophila)-Like 2
  • T-Complex Expressed Gene 4 3
  • Protein Cramped-Like 3
  • C16orf34 4
  • KIAA1426 4
  • TCE4 3

External Ids for CRAMP1L Gene

Summaries for CRAMP1L Gene

GeneCards Summary for CRAMP1L Gene

CRAMP1L (Crm, Cramped-Like (Drosophila)) is a Protein Coding gene. GO annotations related to this gene include chromatin binding. An important paralog of this gene is ENSG00000261732.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRAMP1L Gene

Genomics for CRAMP1L Gene

Genomic Location for CRAMP1L Gene

Start:
1,612,325 bp from pter
End:
1,677,908 bp from pter
Size:
65,584 bases
Orientation:
Plus strand

Genomic View for CRAMP1L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CRAMP1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRAMP1L Gene

Regulatory Elements for CRAMP1L Gene

Proteins for CRAMP1L Gene

  • Protein details for CRAMP1L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96RY5-CRML_HUMAN
    Recommended name:
    Protein cramped-like
    Protein Accession:
    Q96RY5
    Secondary Accessions:
    • A8MZL1
    • B1AJY1
    • Q8NDN1
    • Q9P2C1

    Protein attributes for CRAMP1L Gene

    Size:
    1269 amino acids
    Molecular mass:
    134718 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK61288.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAD38692.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305};

neXtProt entry for CRAMP1L Gene

Proteomics data for CRAMP1L Gene at MOPED

Post-translational modifications for CRAMP1L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CRAMP1L Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CRAMP1L Gene

Domains for CRAMP1L Gene

Protein Domains for CRAMP1L Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

CRML_HUMAN
Domain:
  • Contains 1 SANT domain.:
    • Q96RY5
Family:
  • Belongs to the cramped family.:
    • Q96RY5
genes like me logo Genes that share domains with CRAMP1L: view

No data available for Gene Families for CRAMP1L Gene

Function for CRAMP1L Gene

Gene Ontology (GO) - Molecular Function for CRAMP1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003682 chromatin binding IEA --
genes like me logo Genes that share ontologies with CRAMP1L: view
genes like me logo Genes that share phenotypes with CRAMP1L: view

miRNA for CRAMP1L Gene

miRTarBase miRNAs that target CRAMP1L

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for CRAMP1L Gene

Localization for CRAMP1L Gene

Subcellular locations from UniProtKB/Swiss-Prot for CRAMP1L Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CRAMP1L Gene COMPARTMENTS Subcellular localization image for CRAMP1L gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for CRAMP1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with CRAMP1L: view

Pathways for CRAMP1L Gene

SuperPathways for CRAMP1L Gene

No Data Available

Gene Ontology (GO) - Biological Process for CRAMP1L Gene

None

No data available for Pathways by source for CRAMP1L Gene

Transcripts for CRAMP1L Gene

Unigene Clusters for CRAMP1L Gene

Crm, cramped-like (Drosophila):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CRAMP1L Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11a · 11b · 11c ^ 12a · 12b ^ 13 ^ 14a · 14b ^ 15a · 15b ^ 16a · 16b ·
SP1: - - -
SP2:
SP3:
SP4: - - - - -
SP5: -
SP6:
SP7:
SP8: - - - - - -
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:

ExUns: 16c ^ 17a · 17b · 17c · 17d ^ 18 ^ 19a · 19b ^ 20a · 20b ^ 21a · 21b ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26 ^ 27a · 27b · 27c · 27d · 27e
SP1: - -
SP2:
SP3:
SP4: -
SP5:
SP6: - - -
SP7: -
SP8: -
SP9: - -
SP10: - - - -
SP11: - - - -
SP12: - -
SP13:
SP14:
SP15:

Relevant External Links for CRAMP1L Gene

GeneLoc Exon Structure for
CRAMP1L
ECgene alternative splicing isoforms for
CRAMP1L

Expression for CRAMP1L Gene

mRNA expression in normal human tissues for CRAMP1L Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for CRAMP1L Gene

SOURCE GeneReport for Unigene cluster for CRAMP1L Gene Hs.603676

genes like me logo Genes that share expressions with CRAMP1L: view

Orthologs for CRAMP1L Gene

This gene was present in the common ancestor of animals.

Orthologs for CRAMP1L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CRAMP1L 36
  • 97.68 (n)
  • 97 (a)
CRAMP1L 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CRAMP1L 36
  • 83.97 (n)
  • 85.07 (a)
CRAMP1L 37
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CRAMP1L 36
  • 84.67 (n)
  • 87.25 (a)
CRAMP1L 37
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Cramp1l 36
  • 81.7 (n)
  • 84.26 (a)
Cramp1l 16
Cramp1l 37
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CRAMP1L 37
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 79 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Cramp1l 36
  • 81.63 (n)
  • 83.87 (a)
chicken
(Gallus gallus)
Aves CRAMP1L 36
  • 72.3 (n)
  • 75.02 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia cramp1l 36
  • 64.69 (n)
  • 65.43 (a)
zebrafish
(Danio rerio)
Actinopterygii cramp1l 36
  • 63.36 (n)
  • 62.28 (a)
fruit fly
(Drosophila melanogaster)
Insecta crm 37
  • 23 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea R151.8 37
  • 20 (a)
OneToMany
Species with no ortholog for CRAMP1L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CRAMP1L Gene

ENSEMBL:
Gene Tree for CRAMP1L (if available)
TreeFam:
Gene Tree for CRAMP1L (if available)

Paralogs for CRAMP1L Gene

Paralogs for CRAMP1L Gene

genes like me logo Genes that share paralogs with CRAMP1L: view

Variants for CRAMP1L Gene

Sequence variations from dbSNP and Humsavar for CRAMP1L Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs14418 -- 1,662,703(-) ACGCT(A/C)GCACG intron-variant
rs742312 -- 1,669,773(+) TCTGG(A/G)GTCTT intron-variant
rs749442 -- 1,668,743(+) CCTAG(A/G)GCTGC intron-variant
rs761053 -- 1,658,967(+) TTTCT(C/G)TGGTG intron-variant
rs873366 -- 1,668,770(+) TGACT(A/C)ATGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CRAMP1L Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
nsv904954 CNV Loss 21882294
dgv2537n71 CNV Loss 21882294
nsv905017 CNV Loss 21882294
nsv428317 CNV Gain 18775914
nsv833118 CNV Loss 17160897
nsv827496 CNV Gain 20364138
nsv905021 CNV Gain 21882294
nsv827497 CNV Gain 20364138
nsv518641 CNV Loss 19592680

Relevant External Links for CRAMP1L Gene

HapMap Linkage Disequilibrium report
CRAMP1L

Disorders for CRAMP1L Gene

Relevant External Links for CRAMP1L

Genetic Association Database (GAD)
CRAMP1L
genes like me logo Genes that share disorders with CRAMP1L: view

No data available for UniProtKB/Swiss-Prot for CRAMP1L Gene

Publications for CRAMP1L Gene

  1. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10718198) Nagase T. … Ohara O. (DNA Res. 2000) 3 4
  2. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3

Products for CRAMP1L Gene

Sources for CRAMP1L Gene

Back to Top

Content