Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CPS1-IT1 Gene

Subcategory (RNA class) for CPS1-IT1 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for CPS1-IT1 Gene

  • CPS1 Intronic Transcript 1 2 3
  • CPS1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • CPS1 Intronic Transcript (Non-Protein Coding) 3
  • CPS1-IT 3
  • CPS1IT1 3
  • PRO0132 3
  • CPS1IT 3

External Ids for CPS1-IT1 Gene

ORGUL Members for CPS1-IT1 Gene

Previous HGNC Symbols for CPS1-IT1 Gene

  • CPS1IT

Previous GeneCards Identifiers for CPS1-IT1 Gene

  • GC02P211485

Summaries for CPS1-IT1 Gene

Entrez Gene Summary for CPS1-IT1 Gene

  • This gene does not encode a protein, and it is located within an intron of the gene encoding carbamoyl-phosphate synthetase 1. [provided by RefSeq, Jul 2008]

GeneCards Summary for CPS1-IT1 Gene

CPS1-IT1 (CPS1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPS1-IT1 Gene

Genomics for CPS1-IT1 Gene

Genomic Location for CPS1-IT1 Gene

Start:
210,617,571 bp from pter
End:
210,619,876 bp from pter
Size:
2,306 bases
Orientation:
Plus strand

Genomic View for CPS1-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CPS1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPS1-IT1 Gene

No data available for Regulatory Elements for CPS1-IT1 Gene

Proteins for CPS1-IT1 Gene

Post-translational modifications for CPS1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CPS1-IT1 Gene

Domains for CPS1-IT1 Gene

Gene Families for CPS1-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CPS1-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPS1-IT1 Gene

Function for CPS1-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CPS1-IT1 Gene

Localization for CPS1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CPS1-IT1 Gene

Pathways for CPS1-IT1 Gene

SuperPathways for CPS1-IT1 Gene

No Data Available

Interacting Proteins for CPS1-IT1 Gene

Gene Ontology (GO) - Biological Process for CPS1-IT1 Gene

None

No data available for Pathways by source for CPS1-IT1 Gene

Transcripts for CPS1-IT1 Gene

mRNA/cDNA for CPS1-IT1 Gene

(3) Additional mRNA sequences :

Unigene Clusters for CPS1-IT1 Gene

CPS1 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CPS1-IT1 Gene

No ASD Table

Relevant External Links for CPS1-IT1 Gene

GeneLoc Exon Structure for
CPS1-IT1
ECgene alternative splicing isoforms for
CPS1-IT1

Expression for CPS1-IT1 Gene

mRNA expression in normal human tissues for CPS1-IT1 Gene

SOURCE GeneReport for Unigene cluster for CPS1-IT1 Gene Hs.658398

genes like me logo Genes that share expressions with CPS1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for CPS1-IT1 Gene

Orthologs for CPS1-IT1 Gene

No data available for Orthologs and Evolution for CPS1-IT1 Gene

Paralogs for CPS1-IT1 Gene

No data available for Paralogs for CPS1-IT1 Gene

Variants for CPS1-IT1 Gene

Relevant External Links for CPS1-IT1 Gene

HapMap Linkage Disequilibrium report
CPS1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for CPS1-IT1 Gene

Disorders for CPS1-IT1 Gene

No disorders were found for CPS1-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for CPS1-IT1 Gene

Publications for CPS1-IT1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3

Products for CPS1-IT1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CPS1-IT1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CPS1-IT1
    • Block miRNA regulation of CPS1-IT1 using miScript Target Protectors

    Sources for CPS1-IT1 Gene

    Back to Top

    Content