Aliases for CPPED1 Gene
Aliases for CPPED1 Gene
- Calcineurin Like Phosphoesterase Domain Containing 1 2 3 5
- Calcineurin-Like Phosphoesterase Domain-Containing Protein 1 3 4
- Complete S-Transactivated Protein 1 3 4
- CSTP1 3 4
- Calcineurin-Like Phosphoesterase Domain Containing 1 2
- Serine/Threonine-Protein Phosphatase CPPED1 3
- Complete S Transactivated Protein 1 2
- EC 3.1.3.16 4
External Ids for CPPED1 Gene
- HGNC: 25632
- Entrez Gene: 55313
- Ensembl: ENSG00000103381
- OMIM: 615603
- UniProtKB: Q9BRF8
Previous GeneCards Identifiers for CPPED1 Gene
- GC16M012661
Summaries for CPPED1 Gene
GeneCards Summary for CPPED1 Gene
CPPED1 (Calcineurin Like Phosphoesterase Domain Containing 1) is a Protein Coding gene. Among its related pathways are Innate Immune System. GO annotations related to this gene include hydrolase activity and phosphoprotein phosphatase activity.
UniProtKB/Swiss-Prot for CPPED1 Gene
-
Protein phosphatase that dephosphorylates AKT family kinase specifically at Ser-473, blocking cell cycle progression and promoting cell apoptosis. May play an inhibitory role in glucose uptake by adipocytes.
No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPPED1 Gene
Genomics for CPPED1 Gene
Regulatory Elements for CPPED1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH16G012757 | 1.2 | Ensembl ENCODE | 12 | +45.7 | 45687 | 1.4 | HDAC1 PKNOX1 ATF1 INSM2 FEZF1 YY1 GATA2 ZNF366 CREM EGR2 | CPPED1 LOC105371089 LOC105371090 |
| GH16G012609 | 1.4 | Ensembl ENCODE | 8.5 | +191.6 | 191581 | 5.3 | HNRNPUL1 PKNOX1 FOXA2 MLX ARNT ARID4B DMAP1 YY1 SLC30A9 ZNF766 | ENSG00000259899 ENSG00000238685 CPPED1 SNX29 ENSG00000274834 |
| GH16G012799 | 1.2 | ENCODE | 9.1 | +2.0 | 1991 | 5.0 | MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 | NPIPB2 LOC105371084 ENSG00000261560 COX6CP1 ENSG00000261216 SNX29 CPPED1 LOC105371089 |
| GH16G012816 | 1 | Ensembl ENCODE | 8.9 | -13.0 | -13030 | 1.4 | HDAC1 ELF3 CTCF PKNOX1 TAL1 ETV1 CEBPG TCF12 ZNF766 TRIM24 | CPPED1 GC16M012842 ENSG00000199474 |
| GH16G012619 | 0.9 | FANTOM5 ENCODE | 8.2 | +184.4 | 184366 | 0.4 | NFIC ATF3 NFIB NRF1 JUNB | CPPED1 ENSG00000274834 GC16P012625 |
- Transcription factor binding sites by QIAGEN in the CPPED1 gene promoter:
Regulatory Element Products
Genomic Location for CPPED1 Gene
- Chromosome:
- 16
- Start:
- 12,659,799 bp from pter
- End:
- 12,804,017 bp from pter
- Size:
- 144,219 bases
- Orientation:
- Minus strand
Genomic View for CPPED1 Gene
- Cytogenetic band:
-
- 16p13.12 by Ensembl
- 16p13.12 by Entrez Gene
- 16p13.12 by HGNC
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CPPED1 Gene
Proteins for CPPED1 Gene
-
Protein details for CPPED1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9BRF8-CPPED_HUMAN
- Recommended name:
- Serine/threonine-protein phosphatase CPPED1
- Protein Accession:
- Q9BRF8
- B4DQ68
- Q6MZY9
- Q9H9M9
- Q9NUT6
Protein attributes for CPPED1 Gene
- Size:
- 314 amino acids
- Molecular mass:
- 35548 Da
- Cofactor:
- Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
- Quaternary structure:
- No Data Available
Protein Expression for CPPED1 Gene
Post-translational modifications for CPPED1 Gene
Other Protein References for CPPED1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for CPPED1
- Invitrogen Antibodies for CPPED1
- GeneTex CPPED1 antibody for CPPED1
-
Santa Cruz Biotechnology (SCBT) Antibodies for CPPED1
Protein Products
-
OriGene Purified Proteins for CPPED1
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-
Cloud-Clone Corp. Proteins for CPPED1
- Search GeneTex for Proteins for CPPED1
Assay Products
No data available for DME Specific Peptides for CPPED1 Gene
Domains & Families for CPPED1 Gene
Protein Domains for CPPED1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for CPPED1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q9BRF8UniProtKB/Swiss-Prot:
CPPED_HUMAN :- Belongs to the metallophosphoesterase superfamily. CPPED1 family.
- Family:
-
- Belongs to the metallophosphoesterase superfamily. CPPED1 family.
No data available for Gene Families for CPPED1 Gene
Function for CPPED1 Gene
Molecular function for CPPED1 Gene
- UniProtKB/Swiss-Prot CatalyticActivity:
- [a protein]-serine/threonine phosphate + H(2)O = [a protein]-serine/threonine + phosphate.
- UniProtKB/Swiss-Prot Function:
- Protein phosphatase that dephosphorylates AKT family kinase specifically at Ser-473, blocking cell cycle progression and promoting cell apoptosis. May play an inhibitory role in glucose uptake by adipocytes.
- UniProtKB/Swiss-Prot Induction:
- Transactivated by the large envelope protein of the hepatitis B virus (HBV).
Enzyme Numbers (IUBMB) for CPPED1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004721 | phosphoprotein phosphatase activity | IEA | -- |
| GO:0016787 | hydrolase activity | IEA | -- |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for CPPED1 Gene
- GenomeRNAi human phenotypes for CPPED1:
Animal Model Products
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-
-
ViGene Biosciences lentiviral particle packaged cDNA for CPPED1 gene
-
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CRISPR Products
-
OriGene CRISPR knockouts for CPPED1
-
Santa Cruz Biotechnology (SCBT) CRISPR for CPPED1
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miRNA for CPPED1 Gene
- miRTarBase miRNAs that target CPPED1
-
- hsa-mir-130b-3p (MIRT020291)
- hsa-mir-93-5p (MIRT028145)
- hsa-mir-19b-3p (MIRT031270)
- hsa-mir-27a-3p (MIRT437698)
- hsa-mir-27b-3p (MIRT437707)
- hsa-mir-4266 (MIRT445268)
- hsa-mir-6831-3p (MIRT445269)
- hsa-mir-6888-5p (MIRT445270)
- hsa-mir-574-5p (MIRT618603)
- hsa-mir-6867-5p (MIRT618604)
- hsa-mir-3177-5p (MIRT618605)
- hsa-mir-511-3p (MIRT684064)
miRNA Products
- Search ViGene Biosciences for CPPED1
Inhibitory RNA Products
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-
ViGene Biosciences ready-to-package AAV shRNAs for CPPED1 gene
Clone Products
- Sino Biological Human cDNA Clone for CPPED1
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- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CPPED1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for CPPED1
-
ViGene Biosciences adenoviral particle packaged cDNA for CPPED1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for CPPED1 gene
-
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Flow Cytometry Products
No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CPPED1 Gene
Localization for CPPED1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for CPPED1 Gene
- Cytoplasm.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005576 | extracellular region | TAS | -- |
| GO:0005737 | cytoplasm | IEA | -- |
| GO:0005829 | cytosol | IDA | -- |
| GO:0005886 | plasma membrane | IDA | -- |
| GO:0035578 | azurophil granule lumen | TAS | -- |
Pathways & Interactions for CPPED1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Innate Immune System |
.61
|
|
Pathways by source for CPPED1 Gene
3 Reactome pathways for CPPED1 Gene
Interacting Proteins for CPPED1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006470 | protein dephosphorylation | IEA | -- |
| GO:0043312 | neutrophil degranulation | TAS | -- |
No data available for SIGNOR curated interactions for CPPED1 Gene
Transcripts for CPPED1 Gene
mRNA/cDNA for CPPED1 Gene
- (2) REFSEQ mRNAs :
- (9) Additional mRNA sequences :
- (178) Selected AceView cDNA sequences:
- (4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for CPPED1 Gene
CRISPR Products
-
OriGene CRISPR knockouts for CPPED1
-
Santa Cruz Biotechnology (SCBT) CRISPR for CPPED1
- GenScript: Design CRISPR guide RNA sequences for CPPED1
miRNA Products
- Search ViGene Biosciences for CPPED1
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for CPPED1
- Browse OriGene Inhibitory RNA Products For CPPED1
-
ViGene Biosciences ready-to-package AAV shRNAs for CPPED1 gene
Clone Products
- Sino Biological Human cDNA Clone for CPPED1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CPPED1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CPPED1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2a | · | 2b | · | 2c | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | ^ | 7a | · | 7b |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | |||||||||||||||||||||||||
| SP2: | - | ||||||||||||||||||||||||||||
| SP3: | - | - | - | - | - | ||||||||||||||||||||||||
| SP4: | - | ||||||||||||||||||||||||||||
| SP5: | |||||||||||||||||||||||||||||
| SP6: |
Expression for CPPED1 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Blood (Hematopoietic System)
- Granulocytes Peripheral Blood
mRNA differential expression in normal tissues according to GTEx for CPPED1 Gene
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CPPED1 Gene
NURSA nuclear receptor signaling pathways regulating expression of CPPED1 Gene:
CPPED1SOURCE GeneReport for Unigene cluster for CPPED1 Gene:
Hs.460002mRNA Expression by UniProt/SwissProt for CPPED1 Gene:
Q9BRF8-CPPED_HUMANEvidence on tissue expression from TISSUES for CPPED1 Gene
- Intestine(4.2)
- Liver(4.2)
- Blood(2.9)
- Nervous system(2.6)
Primer Products
-
OriGene qPCR primer pairs for CPPED1
-
OriGene qPCR primer pairs and template standards for CPPED1
No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for CPPED1 Gene
Orthologs for CPPED1 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | CPPED1 34 35 |
|
||
| cow (Bos Taurus) |
Mammalia | CPPED1 34 35 |
|
||
| dog (Canis familiaris) |
Mammalia | CPPED1 34 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Cpped1 34 |
|
||
| mouse (Mus musculus) |
Mammalia | Cpped1 34 16 35 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | CPPED1 35 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | CPPED1 35 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | CPPED1 34 35 |
|
||
| lizard (Anolis carolinensis) |
Reptilia | CPPED1 35 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | cpped1 34 |
|
||
| Str.265 34 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | Xl.11444 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | cpped1 34 35 |
|
||
| Dr.16752 34 |
|
||||
| rainbow trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.3773 34 |
|
||
| sea squirt (Ciona savignyi) |
Ascidiacea | -- 35 |
|
OneToMany | |
| -- 35 |
|
OneToMany |
- Species where no ortholog for CPPED1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for CPPED1 Gene
Pseudogenes.org Pseudogenes for CPPED1 Gene
No data available for Paralogs for CPPED1 Gene
Variants for CPPED1 Gene
| SNP ID | Clin | Chr 16 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000007581 | -- | 12,702,188(+) | GGGCT(A/G)GGGCA | intron-variant | |
| rs1000011067 | -- | 12,756,374(+) | ACTAC(G/T)CTGGG | intron-variant | |
| rs1000058334 | -- | 12,743,078(+) | AATTC(C/G)AGACT | intron-variant | |
| rs1000069912 | -- | 12,775,150(+) | CCCGA(A/G)TTAGC | intron-variant | |
| rs1000088702 | -- | 12,742,820(+) | TCATA(C/T)TCCTG | intron-variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv115e55 | CNV | loss | 17911159 |
| dgv2736n100 | CNV | loss | 25217958 |
| dgv479e214 | CNV | loss | 21293372 |
| dgv4911n54 | CNV | loss | 21841781 |
| esv2751549 | CNV | loss | 17911159 |
| esv3582011 | CNV | loss | 25503493 |
| esv3637967 | CNV | loss | 21293372 |
| esv3637968 | CNV | loss | 21293372 |
| esv3637969 | CNV | loss | 21293372 |
| esv3637972 | CNV | loss | 21293372 |
| nsv1043773 | CNV | loss | 25217958 |
| nsv1052802 | CNV | loss | 25217958 |
| nsv1053617 | CNV | loss | 25217958 |
| nsv1070328 | CNV | deletion | 25765185 |
| nsv1108988 | CNV | deletion | 24896259 |
| nsv473518 | CNV | novel sequence insertion | 20440878 |
| nsv525286 | CNV | loss | 19592680 |
| nsv571463 | CNV | loss | 21841781 |
Relevant External Links for CPPED1 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CPPED1 Gene
Disorders for CPPED1 Gene
Relevant External Links for CPPED1
No disorders were found for CPPED1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CPPED1 Gene
Publications for CPPED1 Gene
- Downregulation of CPPED1 expression improves glucose metabolism in vitro in adipocytes. (PMID: 23939394) Vaittinen M. … Pulkkinen L. (Diabetes 2013) 3 4 64
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
- Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage. (PMID: 25963833) Drissi R. … Boisvert F.M. (Mol. Cell Proteomics 2015) 3 64
Products for CPPED1 Gene
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- Novus Biologicals Antibodies for CPPED1
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- ViGene Biosciences adenoviral particle packaged cDNA for CPPED1 gene
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- Cyagen custom Knockout/knockin (KOKI) mouse models for CPPED1
- VectorBuilder custom plasmid, inducible vectors for CPPED1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CPPED1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CPPED1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
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