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Aliases for CPHXL Gene

Aliases for CPHXL Gene

  • Cytoplasmic Polyadenylated Homeobox Like 2 3
  • AC009122.1 5

External Ids for CPHXL Gene

Summaries for CPHXL Gene

GeneCards Summary for CPHXL Gene

CPHXL (Cytoplasmic Polyadenylated Homeobox Like) is a Protein Coding gene. An important paralog of this gene is ENSG00000284484.

Additional gene information for CPHXL Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPHXL Gene

Genomics for CPHXL Gene

Regulatory Elements for CPHXL Gene

Enhancers for CPHXL Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H075732 0.9 Ensembl ENCODE 0.7 -0.9 -947 1.7 HDAC1 KLF1 ZNF680 ZNF217 ZFHX2 CTBP1 GATA3 EGR1 IKZF1 FOS ADAT1 TMEM170A CPHXL GC16P075766
GH16H075727 0.8 ENCODE 0.4 +5.3 5303 0.2 ELF3 SOX13 FOXA2 SAP130 ZNF644 RARA NR2F6 HOMEZ GATAD2A SOX5 CPHXL ATP5F1P7
GH16H075764 0.8 ENCODE 0.3 -31.6 -31618 0.2 SIX4 CTCF ATF1 RB1 SAP130 CEBPG RAD21 ZNF121 CC2D1A GATA3 BCAR1 GC16P075766 CPHXL
GH16H075753 0.6 ENCODE 0.3 -21.6 -21633 1.1 GATA3 CEBPA HLF CEBPB MNT CEBPG GC16P075766 CPHXL
GH16H075750 0.4 ENCODE 0.4 -18.0 -18038 0.2 POLR2A ADAT1 TERF2IP GC16P075766 CPHXL
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CPHXL on UCSC Golden Path with GeneCards custom track

Genomic Locations for CPHXL Gene

Genomic Locations for CPHXL Gene
chr16:75,714,024-75,732,740
(GRCh38/hg38)
Size:
18,717 bases
Orientation:
Minus strand

Genomic View for CPHXL Gene

Genes around CPHXL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CPHXL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CPHXL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CPHXL Gene

Proteins for CPHXL Gene

  • Protein details for CPHXL Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1W2PPM1
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1W2PPM1

    Protein attributes for CPHXL Gene

    Size:
    405 amino acids
    Molecular mass:
    45714 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CPHXL Gene

Post-translational modifications for CPHXL Gene

No Post-translational modifications

Other Protein References for CPHXL Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for CPHXL Gene

Domains & Families for CPHXL Gene

Protein Domains for CPHXL Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CPHXL: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPHXL Gene

Function for CPHXL Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CPHXL Gene

Localization for CPHXL Gene

Gene Ontology (GO) - Cellular Components for CPHXL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with CPHXL: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CPHXL Gene

Pathways & Interactions for CPHXL Gene

SuperPathways for CPHXL Gene

No Data Available

Interacting Proteins for CPHXL Gene

Gene Ontology (GO) - Biological Process for CPHXL Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CPHXL Gene

Drugs & Compounds for CPHXL Gene

No Compound Related Data Available

Transcripts for CPHXL Gene

mRNA/cDNA for CPHXL Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CPHXL Gene

No ASD Table

Relevant External Links for CPHXL Gene

GeneLoc Exon Structure for
CPHXL
ECgene alternative splicing isoforms for
CPHXL

Expression for CPHXL Gene

NURSA nuclear receptor signaling pathways regulating expression of CPHXL Gene:

CPHXL
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CPHXL Gene

Orthologs for CPHXL Gene

Evolution for CPHXL Gene

ENSEMBL:
Gene Tree for CPHXL (if available)
TreeFam:
Gene Tree for CPHXL (if available)

No data available for Orthologs for CPHXL Gene

Paralogs for CPHXL Gene

Paralogs for CPHXL Gene

genes like me logo Genes that share paralogs with CPHXL: view

Variants for CPHXL Gene

Relevant External Links for CPHXL Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CPHXL

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CPHXL Gene

Disorders for CPHXL Gene

No disorders were found for CPHXL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CPHXL Gene

Publications for CPHXL Gene

  1. A family history of DUX4: phylogenetic analysis of DUXA, B, C and Duxbl reveals the ancestral DUX gene. (PMID: 21110847) Leidenroth A … Hewitt JE (BMC evolutionary biology 2010) 2 3 60
  2. Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. (PMID: 26360614) Töhönen V … Kere J (Nature communications 2015) 3

Products for CPHXL Gene

Sources for CPHXL Gene

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