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Aliases for CPEB2-AS1 Gene

Subcategory (RNA class) for CPEB2-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for CPEB2-AS1 Gene

  • CPEB2 Antisense RNA 1 (Head To Head) 2 3

External Ids for CPEB2-AS1 Gene

ORGUL Members for CPEB2-AS1 Gene

Summaries for CPEB2-AS1 Gene

GeneCards Summary for CPEB2-AS1 Gene

CPEB2-AS1 (CPEB2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPEB2-AS1 Gene

Genomics for CPEB2-AS1 Gene

Genomic Location for CPEB2-AS1 Gene

Start:
14,909,961 bp from pter
End:
15,002,045 bp from pter
Size:
92,085 bases
Orientation:
Minus strand

Genomic View for CPEB2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CPEB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPEB2-AS1 Gene

No data available for Regulatory Elements for CPEB2-AS1 Gene

Proteins for CPEB2-AS1 Gene

Post-translational modifications for CPEB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CPEB2-AS1 Gene

Domains for CPEB2-AS1 Gene

Gene Families for CPEB2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CPEB2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPEB2-AS1 Gene

Function for CPEB2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CPEB2-AS1 Gene

Localization for CPEB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CPEB2-AS1 Gene

Pathways for CPEB2-AS1 Gene

SuperPathways for CPEB2-AS1 Gene

No Data Available

Interacting Proteins for CPEB2-AS1 Gene

Gene Ontology (GO) - Biological Process for CPEB2-AS1 Gene

None

No data available for Pathways by source for CPEB2-AS1 Gene

Transcripts for CPEB2-AS1 Gene

mRNA/cDNA for CPEB2-AS1 Gene

(10) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CPEB2-AS1
    • Block miRNA regulation of CPEB2-AS1 using miScript Target Protectors

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for CPEB2-AS1 Gene

    No ASD Table

    Relevant External Links for CPEB2-AS1 Gene

    GeneLoc Exon Structure for
    CPEB2-AS1
    ECgene alternative splicing isoforms for
    CPEB2-AS1

    Expression for CPEB2-AS1 Gene

    mRNA expression in normal human tissues for CPEB2-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for CPEB2-AS1 Gene

    This gene is overexpressed in Testis (30.7).
    genes like me logo Genes that share expressions with CPEB2-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CPEB2-AS1 Gene

    Orthologs for CPEB2-AS1 Gene

    Evolution for CPEB2-AS1 Gene

    ENSEMBL:
    Gene Tree for CPEB2-AS1 (if available)
    TreeFam:
    Gene Tree for CPEB2-AS1 (if available)

    No data available for Orthologs for CPEB2-AS1 Gene

    Paralogs for CPEB2-AS1 Gene

    No data available for Paralogs for CPEB2-AS1 Gene

    Variants for CPEB2-AS1 Gene

    Sequence variations from dbSNP and Humsavar for CPEB2-AS1 Gene

    SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
    rs729144 -- 14,979,293(-) tattg(G/T)ctatt intron-variant
    rs747610 -- 14,979,076(-) TGGTT(C/T)CCAAA intron-variant
    rs903479 -- 14,961,948(+) GCATG(A/G)GCCAC intron-variant
    rs903480 -- 14,964,040(+) ATTTT(C/G)CAACA intron-variant
    rs903481 -- 14,964,158(+) TATAT(A/T)TTTTT intron-variant

    Relevant External Links for CPEB2-AS1 Gene

    HapMap Linkage Disequilibrium report
    CPEB2-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CPEB2-AS1 Gene

    Disorders for CPEB2-AS1 Gene

    No disorders were found for CPEB2-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for CPEB2-AS1 Gene

    Publications for CPEB2-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
    4. Genetic influences on political ideologies: twin analyses of 19 measures of political ideologies from five democracies and genome-wide findings from three populations. (PMID: 24569950) Hatemi P.K. … Martin N.G. (Behav. Genet. 2014) 3

    Products for CPEB2-AS1 Gene

    Sources for CPEB2-AS1 Gene

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