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Aliases for COX6CP2 Gene

Aliases for COX6CP2 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 2 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 2 2 3
  • DJ894K16.1 3

External Ids for COX6CP2 Gene

Previous GeneCards Identifiers for COX6CP2 Gene

  • GC20U990195
  • GC20P049734
  • GC20P049781
  • GC20P048529
  • GC20P049097
  • GC20P045844

Summaries for COX6CP2 Gene

GeneCards Summary for COX6CP2 Gene

COX6CP2 (Cytochrome C Oxidase Subunit 6C Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX6CP2 Gene

Genomics for COX6CP2 Gene

Regulatory Elements for COX6CP2 Gene

Enhancers for COX6CP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F050477 1.3 Ensembl ENCODE 0.8 -1.2 -1185 1.3 HDGF ATF1 ARNT CREB3L1 ARID4B SIN3A ZNF48 ELK1 CBX5 ZNF143 LINC01273 COX6CP2 RN7SL636P
GH20F050474 1.2 Ensembl ENCODE 0.8 -4.1 -4116 1.6 PKNOX1 ARNT CREB3L1 ARID4B ZNF121 SLC30A9 FOS SP5 KAT8 SMARCA4 ENSG00000232043 COX6CP2 RN7SL636P
GH20F050437 1.8 FANTOM5 Ensembl ENCODE 0.3 -39.1 -39094 5.4 PKNOX1 ARNT CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 SNAI1 PSMD10P1 CEBPB PTPN1 DPM1 LINC01273 MOCS3 ENSG00000232043 TMEM189 RN7SL636P
GH20F050467 1.3 Ensembl ENCODE 0.4 -11.7 -11719 1.4 HDGF CREB3L1 ARID4B SIN3A YBX1 ETS1 YY1 ZNF143 ZNF207 FOS DPM1 PTGIS PTPN1 SLC9A8 ENSG00000232043 KRT18P4 PSMD10P1 CEBPB COX6CP2 RN7SL636P
GH20F050448 1.7 FANTOM5 Ensembl ENCODE 0.3 -28.6 -28615 4.6 PKNOX1 ATF1 ARID4B ZNF48 BRCA1 GTF3C2 CBX5 SP5 ZHX2 MIER2 SNAI1 CEBPB ENSG00000232043 DPM1 PSMD10P1 PTPN1 MIR645 MOCS3 LOC101927512 TMEM189
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around COX6CP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for COX6CP2 Gene

Chromosome:
20
Start:
50,479,716 bp from pter
End:
50,480,105 bp from pter
Size:
390 bases
Orientation:
Plus strand

Genomic View for COX6CP2 Gene

Genes around COX6CP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP2 Gene

Proteins for COX6CP2 Gene

Post-translational modifications for COX6CP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP2 Gene

Domains & Families for COX6CP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX6CP2 Gene

Function for COX6CP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP2 Gene

Localization for COX6CP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for COX6CP2 Gene

Pathways & Interactions for COX6CP2 Gene

SuperPathways for COX6CP2 Gene

No Data Available

Interacting Proteins for COX6CP2 Gene

Gene Ontology (GO) - Biological Process for COX6CP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX6CP2 Gene

Transcripts for COX6CP2 Gene

mRNA/cDNA for COX6CP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP2 Gene

No ASD Table

Relevant External Links for COX6CP2 Gene

GeneLoc Exon Structure for
COX6CP2
ECgene alternative splicing isoforms for
COX6CP2

Expression for COX6CP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for COX6CP2 Gene

mRNA differential expression in normal tissues according to GTEx for COX6CP2 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x12.8), Muscle - Skeletal (x7.5), and Heart - Atrial Appendage (x5.5).

NURSA nuclear receptor signaling pathways regulating expression of COX6CP2 Gene:

COX6CP2
genes like me logo Genes that share expression patterns with COX6CP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for COX6CP2 Gene

Orthologs for COX6CP2 Gene

Evolution for COX6CP2 Gene

ENSEMBL:
Gene Tree for COX6CP2 (if available)
TreeFam:
Gene Tree for COX6CP2 (if available)

No data available for Orthologs for COX6CP2 Gene

Paralogs for COX6CP2 Gene

No data available for Paralogs for COX6CP2 Gene

Variants for COX6CP2 Gene

Relevant External Links for COX6CP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP2 Gene

Disorders for COX6CP2 Gene

Relevant External Links for COX6CP2

Genetic Association Database (GAD)
COX6CP2

No disorders were found for COX6CP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for COX6CP2 Gene

Publications for COX6CP2 Gene

No publications were found for COX6CP2 Gene.

Products for COX6CP2 Gene

Sources for COX6CP2 Gene

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