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Aliases for COX6CP18 Gene

Subcategory (RNA class) for COX6CP18 Gene

lncRNA

Aliases for COX6CP18 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 18 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 18 2

External Ids for COX6CP18 Gene

ORGUL Members for COX6CP18 Gene

Previous GeneCards Identifiers for COX6CP18 Gene

  • GC00U936013

Summaries for COX6CP18 Gene

GeneCards Summary for COX6CP18 Gene

COX6CP18 (Cytochrome C Oxidase Subunit 6C Pseudogene 18) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for COX6CP18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX6CP18 Gene

Genomics for COX6CP18 Gene

Regulatory Elements for COX6CP18 Gene

Enhancers for COX6CP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H002777 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.3 8323 5.3 HDGF PKNOX1 ATF1 TCF12 ZNF766 GLIS2 GATA2 ATF7 NCOA1 REST KCNQ1-AS1 KCNQ1DN KCNQ1 CDKN1C COX6CP18
GH11H002768 1 FANTOM5 ENCODE 0.7 -2.0 -2020 1.1 SMARCE1 SMARCC1 JUN KLF17 DPF2 FOSL1 GLIS2 JUND SMARCA4 ZNF585B KCNQ1OT1 CDKN1C COX6CP18
GH11H002724 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -43.0 -43046 7.4 MLX ARID4B DMAP1 SP5 NFYC PPARG KAT8 NFIL3 SSRP1 MIER3 KCNQ1OT1 KCNQ1DN TSSC4 COX6CP18
GH11H002810 1.3 Ensembl ENCODE dbSUPER 0.3 +40.9 40911 3.1 HDAC1 PKNOX1 TAL1 ZIC2 TCF12 CTBP1 GATA2 NCOR1 CREM EGR2 COX6CP18 KCNQ1-AS1
GH11H002824 1.9 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.2 +54.7 54674 3.4 TBP JUN MAX ZIC2 RFX5 POLR2A SMC3 RCOR1 FOS CHD2 KCNQ1-AS1 KCNQ1DN CDKN1C COX6CP18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around COX6CP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX6CP18 Gene

Genomic Locations for COX6CP18 Gene
chr11:2,771,356-2,771,577
(GRCh38/hg38)
Size:
222 bases
Orientation:
Plus strand

Genomic View for COX6CP18 Gene

Genes around COX6CP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP18 Gene

Proteins for COX6CP18 Gene

Post-translational modifications for COX6CP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP18 Gene

Domains & Families for COX6CP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX6CP18 Gene

Function for COX6CP18 Gene

Phenotypes From GWAS Catalog for COX6CP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP18 Gene

Localization for COX6CP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX6CP18 Gene

Pathways & Interactions for COX6CP18 Gene

SuperPathways for COX6CP18 Gene

No Data Available

Interacting Proteins for COX6CP18 Gene

Gene Ontology (GO) - Biological Process for COX6CP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX6CP18 Gene

Drugs & Compounds for COX6CP18 Gene

No Compound Related Data Available

Transcripts for COX6CP18 Gene

mRNA/cDNA for COX6CP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP18 Gene

No ASD Table

Relevant External Links for COX6CP18 Gene

GeneLoc Exon Structure for
COX6CP18
ECgene alternative splicing isoforms for
COX6CP18

Expression for COX6CP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for COX6CP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of COX6CP18 Gene:

COX6CP18
genes like me logo Genes that share expression patterns with COX6CP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX6CP18 Gene

Orthologs for COX6CP18 Gene

Evolution for COX6CP18 Gene

ENSEMBL:
Gene Tree for COX6CP18 (if available)
TreeFam:
Gene Tree for COX6CP18 (if available)

No data available for Orthologs for COX6CP18 Gene

Paralogs for COX6CP18 Gene

No data available for Paralogs for COX6CP18 Gene

Variants for COX6CP18 Gene

Relevant External Links for COX6CP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP18 Gene

Disorders for COX6CP18 Gene

No disorders were found for COX6CP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX6CP18 Gene

Publications for COX6CP18 Gene

No publications were found for COX6CP18 Gene.

Products for COX6CP18 Gene

Sources for COX6CP18 Gene

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