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Aliases for COX6CP10 Gene

Subcategory (RNA class) for COX6CP10 Gene

antisense

Aliases for COX6CP10 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 10 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 10 2

External Ids for COX6CP10 Gene

ORGUL Members for COX6CP10 Gene

Previous GeneCards Identifiers for COX6CP10 Gene

  • GC00U936081

Summaries for COX6CP10 Gene

GeneCards Summary for COX6CP10 Gene

COX6CP10 (Cytochrome C Oxidase Subunit 6C Pseudogene 10) is a Pseudogene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for COX6CP10 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for COX6CP10

Additional gene information for COX6CP10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for COX6CP10 Gene

Genomics for COX6CP10 Gene

Regulatory Elements for COX6CP10 Gene

Enhancers for COX6CP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H033577 1.4 FANTOM5 Ensembl ENCODE 0.3 +23.9 23933 2.8 SOX13 FOXA2 JUN CEBPG TEAD3 ZNF316 POLR2A FOS HOMEZ MAFK FBXL2 CLASP2 UBP1 COX6CP10 GC03M033644
GH03H033643 0.8 dbSUPER 0.2 +90.1 90121 3 ZBTB21 ZSCAN4 CEBPG ZNF2 ZNF324 POLR2A ZNF366 ZNF600 PRDM10 ATF7 CLASP2 UBP1 FBXL2 GC03M033644 COX6CP10
GH03H033557 0.2 ENCODE 0.7 +3.3 3339 1 CLASP2 UBP1 COX6CP10 GC03M033644
GH03H033598 0.3 FANTOM5 0.3 +43.6 43614 0.3 CLASP2 COX6CP10 GC03M033644
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around COX6CP10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX6CP10 Gene

Genomic Locations for COX6CP10 Gene
chr3:33,554,636-33,554,859
(GRCh38/hg38)
Size:
224 bases
Orientation:
Plus strand

Genomic View for COX6CP10 Gene

Genes around COX6CP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP10 Gene

ORGUL Member Location for COX6CP10 Gene

ORGUL Member Location for COX6CP10 gene

Proteins for COX6CP10 Gene

Post-translational modifications for COX6CP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP10 Gene

Domains & Families for COX6CP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX6CP10 Gene

Function for COX6CP10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP10 Gene

Localization for COX6CP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX6CP10 Gene

Pathways & Interactions for COX6CP10 Gene

SuperPathways for COX6CP10 Gene

No Data Available

Interacting Proteins for COX6CP10 Gene

Gene Ontology (GO) - Biological Process for COX6CP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX6CP10 Gene

Drugs & Compounds for COX6CP10 Gene

No Compound Related Data Available

Transcripts for COX6CP10 Gene

fRNAdb Secondary structures for COX6CP10 Gene

  • FR218950

mRNA/cDNA for COX6CP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP10 Gene

No ASD Table

Relevant External Links for COX6CP10 Gene

GeneLoc Exon Structure for
COX6CP10
ECgene alternative splicing isoforms for
COX6CP10

Expression for COX6CP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for COX6CP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of COX6CP10 Gene:

COX6CP10
genes like me logo Genes that share expression patterns with COX6CP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX6CP10 Gene

Orthologs for COX6CP10 Gene

Evolution for COX6CP10 Gene

ENSEMBL:
Gene Tree for COX6CP10 (if available)
TreeFam:
Gene Tree for COX6CP10 (if available)

No data available for Orthologs for COX6CP10 Gene

Paralogs for COX6CP10 Gene

No data available for Paralogs for COX6CP10 Gene

Variants for COX6CP10 Gene

Relevant External Links for COX6CP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP10 Gene

Disorders for COX6CP10 Gene

No disorders were found for COX6CP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX6CP10 Gene

Publications for COX6CP10 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for COX6CP10 Gene

Sources for COX6CP10 Gene

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