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Aliases for COX11P1 Gene

Subcategory (RNA class) for COX11P1 Gene

lncRNA

Aliases for COX11P1 Gene

  • COX11, Cytochrome C Oxidase Copper Chaperone Pseudogene 1 2 3 5
  • COX11 Pseudogene 1 2 3
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein (Yeast) Pseudogene 2
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein Pseudogene 1 3
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein, Pseudogene 3
  • COX11 Cytochrome C Oxidase Assembly Homolog Pseudogene 1 3
  • COX11P 3
  • COX11 3

External Ids for COX11P1 Gene

ORGUL Members for COX11P1 Gene

Previous HGNC Symbols for COX11P1 Gene

  • COX11P

Previous GeneCards Identifiers for COX11P1 Gene

  • GC06P028222

Summaries for COX11P1 Gene

GeneCards Summary for COX11P1 Gene

COX11P1 (COX11, Cytochrome C Oxidase Copper Chaperone Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX11P1 Gene

Genomics for COX11P1 Gene

Regulatory Elements for COX11P1 Gene

Enhancers for COX11P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028474 0.6 Ensembl ENCODE 12.2 +28.1 28105 1.6 PKNOX1 ARNT CREB3L1 ARID4B ZNF2 SLC30A9 ZNF143 ZNF207 FOS ZNF263 ZKSCAN3 COX11P1 ZSCAN23 ZKSCAN4 ZKSCAN8 GPX6 GPX5 ZNF311 ZNF602P GC06M028475
GH06F028565 0.2 ENCODE 10.8 +119.5 119485 1.1 PKNOX1 ATF1 ARNT MLX CBX5 GATA2 NCOA1 REST KAT8 MBD2 ZNF603P GPX6 ZKSCAN8 OR2E1P COX11P1 ZSCAN23 GPX5 PIR44110 GC06M028544 TRR-TCG5-1
GH06F028553 1.2 Ensembl ENCODE 10.6 +107.1 107100 1.6 HDGF ATF1 PKNOX1 CREB3L1 YBX1 YY1 ELK1 GATA2 KLF13 MXD4 ZNF603P ZSCAN23 GPX5 OR2E1P COX11P1 ZBED9 GC06M028544 TRR-TCG5-1 PIR44110
GH06F028552 0.6 ENCODE 10.6 +105.7 105654 0.2 HDAC1 PKNOX1 TAL1 CCNT2 FOXK2 NFE2 ETV6 CREM SMARCE1 RNF2 GPX5 OR2E1P COX11P1 ZSCAN23 GC06M028544 TRR-TCG5-1 PIR44110
GH06F028398 0.2 ENCODE 10.5 -47.6 -47602 2.5 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF603P ZKSCAN3 ZKSCAN8 ZSCAN23 ZSCAN31 ZNF311 ZNF192P1 ZKSCAN4 COX11P1 OR2E1P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around COX11P1 on UCSC Golden Path with GeneCards custom track

Promoters for COX11P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001879532 181 999 ZNF76 KLF17 ZNF2 GLIS2 KLF7 ZNF391 EGR2 ZNF518A ZNF843 ZFP69B

Genomic Location for COX11P1 Gene

Chromosome:
6
Start:
28,446,920 bp from pter
End:
28,447,807 bp from pter
Size:
888 bases
Orientation:
Plus strand

Genomic View for COX11P1 Gene

Genes around COX11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX11P1 Gene

Proteins for COX11P1 Gene

Post-translational modifications for COX11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX11P1 Gene

Domains & Families for COX11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX11P1 Gene

Function for COX11P1 Gene

Animal Model Products

miRNA for COX11P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for COX11P1 Gene

Localization for COX11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for COX11P1 Gene

Pathways & Interactions for COX11P1 Gene

SuperPathways for COX11P1 Gene

No Data Available

Interacting Proteins for COX11P1 Gene

Gene Ontology (GO) - Biological Process for COX11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX11P1 Gene

Transcripts for COX11P1 Gene

mRNA/cDNA for COX11P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX11P1 Gene

No ASD Table

Relevant External Links for COX11P1 Gene

GeneLoc Exon Structure for
COX11P1
ECgene alternative splicing isoforms for
COX11P1

Expression for COX11P1 Gene

mRNA expression in normal human tissues for COX11P1 Gene

mRNA differential expression in normal tissues according to GTEx for COX11P1 Gene

This gene is overexpressed in Testis (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of COX11P1 Gene:

COX11P1
genes like me logo Genes that share expression patterns with COX11P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for COX11P1 Gene

Orthologs for COX11P1 Gene

Evolution for COX11P1 Gene

ENSEMBL:
Gene Tree for COX11P1 (if available)
TreeFam:
Gene Tree for COX11P1 (if available)

No data available for Orthologs for COX11P1 Gene

Paralogs for COX11P1 Gene

No data available for Paralogs for COX11P1 Gene

Variants for COX11P1 Gene

Relevant External Links for COX11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX11P1 Gene

Disorders for COX11P1 Gene

No disorders were found for COX11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX11P1 Gene

Publications for COX11P1 Gene

  1. Identification and characterization of human cDNAs specific to BCS1, PET112, SCO1, COX15, and COX11, five genes involved in the formation and function of the mitochondrial respiratory chain. (PMID: 9878253) Petruzzella V. … Zeviani M. (Genomics 1998) 2 3 64

Products for COX11P1 Gene

Sources for COX11P1 Gene

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