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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

COL6A5 Gene

protein-coding   GIFtS: 50
GCID: GC03P130065

Collagen, Type VI, Alpha 5

(Previous names: collagen, type XXIX, alpha 1)
(Previous symbol: COL29A1)
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Collagen, Type VI, Alpha 51 2     Von Willebrand Factor A Domain-Containing Protein 42 3
COL29A11 2 3 5     Von Willebrand Factor A Domain Containing 41
Collagen, Type XXIX, Alpha 11 2     Collagen Alpha-5(VI) Chain2
VWA42 3     Collagen Alpha-1(XXIX) Chain3

External Ids:    HGNC: 266741   Entrez Gene: 2560762   Ensembl: ENSG000001727527   OMIM: 6119165   UniProtKB: A8TX703   
ORGUL members:         
NONCODE14:n406441      

Export aliases for COL6A5 gene to outside databases

Previous GC identifer: GC03P127449


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for COL6A5 Gene:
This gene encodes a member of the collagen superfamily of proteins. The encoded protein contains multiple von
Willebrand factor A-like domains and may interact with the alpha 1 and alpha 2 chains of collagen VI to form the
complete collagen VI trimer. Polymorphisms in this gene may be linked to dermal phenotypes, such as eczema.
Alternative splicing results in multiple transcript variants. (provided by RefSeq, May 2013)

GeneCards Summary for COL6A5 Gene: 
COL6A5 (collagen, type VI, alpha 5) is a protein-coding gene, and is affiliated with the lncRNA class. Diseases associated with COL6A5 include eczema, and atopic dermatitis, and among its related super-pathways are Collagen formation and Degradation of the extracellular matrix. An important paralog of this gene is COL28A1.

UniProtKB/Swiss-Prot: CO6A5_HUMAN, A8TX70
Function: Collagen VI acts as a cell-binding protein (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.2  NT_005612.16  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for COL6A5
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for COL6A5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat COL6A5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q22.1   Ensembl cytogenetic band:  3q22.1   HGNC cytogenetic band: 3q21.3

COL6A5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
COL6A5 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P130065:  view genomic region     (about GC identifiers)

Start:
130,064,359 bp from pter      End:
130,203,688 bp from pter
Size:
139,330 bases      Orientation:
plus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: CO6A5_HUMAN, A8TX70 (See protein sequence)
Recommended Name: Collagen alpha-5(VI) chain precursor  
Size: 2615 amino acids; 289926 Da
Subunit: Trimers composed of three different chains: alpha-1(VI), alpha-2(VI), and alpha-3(VI) or alpha-5(VI) or
alpha-6(VI) (Probable)
Subcellular location: Secreted, extracellular space, extracellular matrix (By similarity). Note=Deposed in the
extracellular matrix of skeletal muscle (By similarity)
Sequence caution: Sequence=BAC04092.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=BAC04092.1; Type=Frameshift; Positions=2591; Sequence=BAC85681.1; Type=Erroneous initiation;
Secondary accessions: A9J6L2 A9J6L4 A9J6L6 A9J6L7 A9J6M0 A9J6M1 A9J6M2 B5MEA7 Q6ZW26 Q8NA36
Alternative splicing: 2 isoforms:  A8TX70-1   A8TX70-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for COL6A5: NX_A8TX70

Explore proteomics data for COL6A5 at MOPED 

Post-translational modifications:

  • UniProtKB: Prolines at the third position of the tripeptide repeating unit (G-X-Y) are hydroxylated in some or all of the
    chains (By similarity)
  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_A8TX70

  • COL6A5 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    COL6A5 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001265227.1  NP_694996.5  

    ENSEMBL proteins: 
     ENSP00000309762   ENSP00000422898   ENSP00000362250   ENSP00000424968   ENSP00000390895  
     ENSP00000265379  
    Reactome Protein details: A8TX70
    Human Recombinant Protein Products for COL6A5: 
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    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Cloud-Clone Corp. 

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region TAS--
    GO:0005581collagen IEA--
    GO:0031012colocalizes with extracellular matrix ISS--

    COL6A5 for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    COLLAGEN: Collagens

    2 InterPro protein domains:
     IPR008160 Collagen
     IPR002035 VWF_A

    Graphical View of Domain Structure for InterPro Entry A8TX70

    ProtoNet protein and cluster: A8TX70

    UniProtKB/Swiss-Prot: CO6A5_HUMAN, A8TX70
    Similarity: Belongs to the type VI collagen family
    Similarity: Contains 10 VWFA domains


    COL6A5 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: CO6A5_HUMAN, A8TX70
    Function: Collagen VI acts as a cell-binding protein (By similarity)

    Animal Models:

       inGenious Targeting Laboratory - Custom generated mouse model solutions for COL6A5 
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    miRNA
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    1 QIAGEN miScript miRNA Assays for microRNA that regulate COL6A5:
    hsa-miR-330-3p
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    Inhib. RNA
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section

    SuperPaths for COL6A5 About   (see all 7)                                                                                              See pathways by source

    SuperPathContained pathways About
    1Collagen biosynthesis and modifying enzymes
    Collagen biosynthesis and modifying enzymes0.74
    Assembly of collagen fibrils and other multimeric structures0.65
    Collagen formation0.74
    Extracellular matrix organization0.39
    2Degradation of the extracellular matrix
    Degradation of the extracellular matrix0.79
    Degradation of collagen0.79
    3Axon guidance
    Axon guidance0.69
    Developmental Biology0.69
    4NCAM signaling for neurite out-growth
    NCAM signaling for neurite out-growth0.62
    NCAM1 interactions0.62
    5Signaling by FGFR
    Signaling by PDGF0.85

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways


    5/13        Reactome Pathways for COL6A5 (see all 13)
        Developmental Biology
    NCAM1 interactions
    Assembly of collagen fibrils and other multimeric structures
    NCAM signaling for neurite out-growth
    Collagen formation



    COL6A5 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for COL6A5

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    1 Interacting protein for COL6A5 (ENSP000003097624) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007155cell adhesion IEA--
    GO:0022617extracellular matrix disassembly TAS--
    GO:0030198extracellular matrix organization TAS--
    GO:0030574collagen catabolic process TAS--

    COL6A5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for COL6A5 (CO6A5)

    Search CenterWatch for drugs/clinical trials and news about COL6A5 / CO6A5

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for COL6A5 gene (2 alternative transcripts): 
    NM_001278298.1  NM_153264.6  

    Unigene Cluster for COL6A5:

    Collagen, type VI, alpha 5
    Hs.205403  [show with all ESTs]
    Unigene Representative Sequence: EU085556
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000312481(uc010hti.1 uc010htj.1) ENST00000512836(uc021xdz.1)
    ENST00000373157 ENST00000512482 ENST00000432398 ENST00000265379(uc010htk.1)

    miRNA
    Products:
         
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    1 QIAGEN miScript miRNA Assays for microRNA that regulate COL6A5:
    hsa-miR-330-3p
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    Inhib. RNA
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    Additional mRNA sequence: 

    AK093199.1 AK123718.1 AM906078.1 AM906079.1 AM906080.1 AM906081.1 AM906082.1 AM906083.1 
    AM906084.1 EU085556.1 NR_022012.1 

    5 DOTS entries:

    DT.101975688  DT.120851496  DT.99998351  DT.120860937  DT.120863309 

    9 AceView cDNA sequences:

    BX097868 NM_153264 AK123718 AX747986 BG192944 CA438505 AK093199 AI743837 
    BG193493 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for COL6A5    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9
    SP1:                                                            
    SP2:                                            -     -         


    ECgene alternative splicing isoforms for COL6A5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    COL6A5 expression in normal human tissues (normalized intensities)      COL6A5 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CTTTGCTTTG
    COL6A5 Expression
    About this image


    COL6A5 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/1 selected tissues (see all 1) fully expand
     
     Adipose (Muscoskeletal System)
             Visceral White Adipose

    See COL6A5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for COL6A5

    SOURCE GeneReport for Unigene cluster: Hs.205403

    UniProtKB/Swiss-Prot: CO6A5_HUMAN, A8TX70
    Tissue specificity: Expressed in skin, followed by lung, small intestine, colon and testis. In skin, it is
    expressed in the epidermis with strongest staining in suprabasal viable layers. In ATOD patients, it is absent in
    the most differentiated upper spinous and granular layers (at protein level)

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for COL6A5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for COL6A5 gene from 4/10 species (see all 10)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Col6a51 , 5 collagen, type VI, alpha 51, 5 79.38(n)1
    74.9(a)1
      9 (57.34 cM)5
    6650331  NM_001167923.11  NP_001161395.11 
     1058586685 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    Uncharacterized protein
    43(a)
    43(a)
    many ↔ many
    many ↔ many
    6(36766603-36854983)
    6(36945116-37036184)
    zebrafish
    (Danio rerio)
    Actinopterygii col6a66
    collagen, type VI, alpha 6
    28(a)
    1 → many
    16(38076697-38125338)
    worm
    (Caenorhabditis elegans)
    Secernentea C18H7.16
    C16E9.16
    (see all 3)
    Protein C16E9.1
    (see all 3)
    19(a)
    13(a)
    (see all 3)
    possible ortholog
    many ↔ many
    (see all 3)
    IV(615544-620930)
    X(6940479-6943613)


    ENSEMBL Gene Tree for COL6A5 (if available)
    TreeFam Gene Tree for COL6A5 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for COL6A5 gene
    COL28A12  COL6A12  COLEC122  COLQ2  COL6A62  COL6A22  SCARA32  COL17A12  
    COL6A32  
    9 SIMAP similar genes for COL6A5 using alignment to 6 protein entries:     CO6A5_HUMAN (see all proteins):
    COL6A6    COCH    COL21A1    COL6A3    MATN1    COL13A1
    MSR1    VIT    COLQ

    COL6A5 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/3149 SNPs in COL6A5 are shown (see all 3149)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs674458191,2
    C--127517571(+) CATTT-/GACTGC 2 -- int10--------
    rs732147291,2
    C--127523885(+) AAGAAA/GGAAGG 2 -- int10--------
    rs357857421,2
    C--127523887(+) GAAAG-/GAAG/ 
    GAAGGAAG
    AAGGA
    2 -- int10--------
    rs113557961,2
    C,F--127575593(+) GCACAT/-TTAGA 2 -- int1 nc-transcript-variant4Minor allele frequency- -:0.38NA 8
    rs349066541,2
    C--127579272(+) TAAAG-/ACAAAA 2 -- int10--------
    rs729963971,2
    C--130048138(+) CCATTC/TAAATC 2 -- us2k11Minor allele frequency- T:0.50WA 2
    rs790923611,2
    --130048262(+) GCTATC/GTTTTA 2 -- us2k10--------
    rs1412864061,2
    --130048322(+) AAGGTC/TGGGTT 2 -- us2k10--------
    rs1856250061,2
    --130048459(+) TGAAAA/CCCAAG 2 -- us2k10--------
    rs1507742171,2
    --130048477(+) AAGTAA/GGTTCA 2 -- us2k10--------

    HapMap Linkage Disequilibrium report for COL6A5 (130064359 - 130203688 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10/12 variations for COL6A5 (see all 12):    About this table     
    Variant IDTypeSubtypePubMed ID
    esv2662769CNV Deletion23128226
    esv2665713CNV Deletion23128226
    esv269755CNV Insertion20981092
    esv23758CNV Loss19812545
    esv34166CNV Loss18971310
    nsv460854CNV Loss19166990
    nsv515803CNV Loss19592680
    nsv437881CNV Loss16468122
    nsv437854CNV Loss16327808
    dgv5258n71CNV Loss21882294


    Human Gene Mutation Database (HGMD): COL6A5
    SABiosciences Cancer Mutation PCR Assays
    SeqTarget long-range PCR primers for resequencing COL6A5
    DNA2.0 Custom Variant and Variant Library Synthesis for COL6A5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    OMIM gene information: 611916    OMIM disorders: --

    UniProtKB/Swiss-Prot: CO6A5_HUMAN, A8TX70
  • Note=Patients affected by atopic dermatitis display an abnormal distribution of COL29A1 mRNA and protein
    in skin suggesting that COL29A1 may be involved in the pathogenesis of the disease

  • 13 diseases for COL6A5:    About MalaCards
    eczema    atopic dermatitis    dermatitis    bethlem myopathy
    ullrich congenital muscular dystrophy    congenital muscular dystrophy    duchenne muscular dystrophy    muscular dystrophy
    atopy    myopathy    chronic obstructive pulmonary disease    inflammatory bowel disease
    asthma

    2 diseases from the University of Copenhagen DISEASES database for COL6A5:
    Ullrich congenital muscular dystrophy     Bethlem myopathy

    COL6A5 for disorders           About GeneDecksing

    Genetic Association Database (GAD): COL6A5
    Human Genome Epidemiology (HuGE) Navigator: COL6A5 (3 documents)

    Export disorders for COL6A5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for COL6A5 gene, integrated from 9 sources (see all 13):
    (articles sorted by number of sources associating them with COL6A5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Variants in a novel epidermal collagen gene (COL29A1) are associated with atopic dermatitis. (PubMed id 17850181)1, 2, 3 Soederhaell C.... Lee Y.-A. (2007)
    2. Three novel collagen VI chains with high homology to the alpha 3 chain. (PubMed id 18276594)1, 2 Gara S.K.... Wagener R. (2008)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    4. Expression of collagen VI a5 and a6 chains in human mu scle and in Duchenne muscular dystrophy-related muscle fibrosis. (PubMed id 22226732)1 Sabatelli P....Wagener R. (2012)
    5. Expression of the collagen VI I+5 and I+6 chains in nor mal human skin and in skin of patients with collagen VI-related myopathies. (PubMed id 20882040)1 Sabatelli P....Wagener R. (2011)
    6. Activity-based chemical proteomics accelerates inhibi tor development for deubiquitylating enzymes. (PubMed id 22118674)1 Altun M....Kessler B.M. (2011)
    7. A comprehensive analysis of the COL29A1 gene does not support a role in eczema. (PubMed id 21353297)1 Naumann A....Weidinger S. (2011)
    8. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
    9. Variation in the COL29A1 gene in German patients with atopic dermatitis, asthma and chronic obstructive pulmonary disease. (PubMed id 20649719)1 Harazin M....Stemmler S. (2010)
    10. A pooling-based genome-wide analysis identifies new p otential candidate genes for atopy in the European Community Respiratory Health Survey (ECRHS). (PubMed id 19961619)1 Castro-Giner F....de Cid R. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 256076 HGNC: 26674 AceView: FLJ35880 Ensembl:ENSG00000172752 euGenes: HUgn256076
    ECgene: COL6A5 H-InvDB: COL6A5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for COL6A5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for COL6A5 gene:
    Search GeneIP for patents involving COL6A5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Sirion Biotech, Cell lines from GenScript, and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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