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Aliases for COL5A1-AS1 Gene

Subcategory (RNA class) for COL5A1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for COL5A1-AS1 Gene

  • COL5A1 Antisense RNA 1 2 3 4
  • COL5A1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C9orf104 3 4
  • Chromosome 9 Open Reading Frame 104 2
  • COL5A1 Antisense Gene Protein 1 4
  • BA54A22.4 3

External Ids for COL5A1-AS1 Gene

ORGUL Members for COL5A1-AS1 Gene

Previous Symbols for COL5A1-AS1 Gene

  • C9orf104

Summaries for COL5A1-AS1 Gene

GeneCards Summary for COL5A1-AS1 Gene

COL5A1-AS1 (COL5A1 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COL5A1-AS1 Gene

Genomics for COL5A1-AS1 Gene

Genomic Location for COL5A1-AS1 Gene

Start:
134,649,385 bp from pter
End:
134,652,843 bp from pter
Size:
3,459 bases
Orientation:
Minus strand

Genomic View for COL5A1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for COL5A1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COL5A1-AS1 Gene

No data available for Regulatory Elements for COL5A1-AS1 Gene

Proteins for COL5A1-AS1 Gene

  • Protein details for COL5A1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5SY13-COAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by COL5A1-AS1
    Protein Accession:
    Q5SY13
    Secondary Accessions:

    Protein attributes for COL5A1-AS1 Gene

    Size:
    56 amino acids
    Molecular mass:
    6588 Da
    Quaternary structure:
    No Data Available

neXtProt entry for COL5A1-AS1 Gene

Proteomics data for COL5A1-AS1 Gene at MOPED

Post-translational modifications for COL5A1-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for COL5A1-AS1 Gene

Domains for COL5A1-AS1 Gene

Gene Families for COL5A1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for COL5A1-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with COL5A1-AS1: view

No data available for UniProtKB/Swiss-Prot for COL5A1-AS1 Gene

Function for COL5A1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for COL5A1-AS1 Gene

Localization for COL5A1-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for COL5A1-AS1 Gene

Pathways for COL5A1-AS1 Gene

SuperPathways for COL5A1-AS1 Gene

No Data Available

Interacting Proteins for COL5A1-AS1 Gene

Gene Ontology (GO) - Biological Process for COL5A1-AS1 Gene

None

No data available for Pathways by source for COL5A1-AS1 Gene

Transcripts for COL5A1-AS1 Gene

mRNA/cDNA for COL5A1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COL5A1-AS1 Gene

No ASD Table

Relevant External Links for COL5A1-AS1 Gene

GeneLoc Exon Structure for
COL5A1-AS1
ECgene alternative splicing isoforms for
COL5A1-AS1

Expression for COL5A1-AS1 Gene

mRNA expression in normal human tissues for COL5A1-AS1 Gene

genes like me logo Genes that share expressions with COL5A1-AS1: view

Orthologs for COL5A1-AS1 Gene

Evolution for COL5A1-AS1 Gene

ENSEMBL:
Gene Tree for COL5A1-AS1 (if available)
TreeFam:
Gene Tree for COL5A1-AS1 (if available)

No data available for Orthologs for COL5A1-AS1 Gene

Paralogs for COL5A1-AS1 Gene

No data available for Paralogs for COL5A1-AS1 Gene

Variants for COL5A1-AS1 Gene

Relevant External Links for COL5A1-AS1 Gene

HapMap Linkage Disequilibrium report
COL5A1-AS1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for COL5A1-AS1 Gene

Disorders for COL5A1-AS1 Gene

No disorders were found for COL5A1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for COL5A1-AS1 Gene

Publications for COL5A1-AS1 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4

Products for COL5A1-AS1 Gene

Sources for COL5A1-AS1 Gene

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