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Aliases for CNTRL Gene

Aliases for CNTRL Gene

  • Centriolin 2 3 3 5
  • Centrosomal Protein Of 110 KDa 3 4
  • Centrosomal Protein 110kDa 2 3
  • Centrosomal Protein 1 2 4
  • Cep110 3 4
  • CEP1 3 4
  • BA165P4.1 (Ortholog Of Mouse Ma2a8) 3
  • BA165P4.2 (Centrosomal Protein 1) 3
  • Centriole Associated Protein 3
  • 110 KDa Centrosomal Protein 3
  • BA165P4.1 3
  • FAN 3

External Ids for CNTRL Gene

Previous HGNC Symbols for CNTRL Gene

  • CEP1
  • CEP110

Previous GeneCards Identifiers for CNTRL Gene

  • GC09P123839

Summaries for CNTRL Gene

Entrez Gene Summary for CNTRL Gene

  • This gene encodes a centrosomal protein required for the centrosome to function as a microtubule organizing center. The gene product is also associated with centrosome maturation. One version of stem cell myeloproliferative disorder is the result of a reciprocal translocation between chromosomes 8 and 9, with the breakpoint associated with fibroblast growth factor receptor 1 and centrosomal protein 1. [provided by RefSeq, Jul 2008]

GeneCards Summary for CNTRL Gene

CNTRL (Centriolin) is a Protein Coding gene. Diseases associated with CNTRL include Hypertrophy Of Breast and 8P11 Myeloproliferative Syndrome. Among its related pathways are Regulation of PLK1 Activity at G2/M Transition and HIV Life Cycle. GO annotations related to this gene include nucleotide binding. An important paralog of this gene is LRGUK.

UniProtKB/Swiss-Prot for CNTRL Gene

  • Involved in cell cycle progression and cytokinesis. During the late steps of cytokinesis, anchors exocyst and SNARE complexes at the midbody, thereby allowing secretory vesicle-mediated abscission.

Gene Wiki entry for CNTRL Gene

Additional gene information for CNTRL Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CNTRL Gene

Genomics for CNTRL Gene

Regulatory Elements for CNTRL Gene

Enhancers for CNTRL Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H121397 1.4 FANTOM5 Ensembl ENCODE 30.8 +324.3 324261 2 PKNOX1 ATF1 RAD21 ZEB1 RFX5 ZNF366 ZNF143 FOS ATF7 ZNF202 GGTA1P PSMD5 CNTRL FBXW2 MRRF PSMD5-AS1 LOC102723324 STOM GSN-AS1 ENSG00000239593
GH09H120709 1.6 FANTOM5 ENCODE dbSUPER 26.3 -362.0 -361973 6 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 PSMD5-AS1 CNTRL PSMD5 FBXW2 MEGF9 PIR45570
GH09H121070 1.5 FANTOM5 ENCODE 26 -1.3 -1292 5 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 PSMD5 FBXW2 CNTRL PSMD5-AS1 C5 ENSG00000270917 TRAF1 DAB2IP
GH09H121275 2 FANTOM5 Ensembl ENCODE dbSUPER 15.9 +207.9 207943 15 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZBTB7B SLC30A9 MRRF PSMD5 CNTRL FBXW2 PSMD5-AS1 GSN GGTA1P C5 LOC102723324 STOM
GH09H121267 1.5 FANTOM5 ENCODE dbSUPER 15.9 +195.6 195580 6 RB1 ARID4B SIN3A ZBTB40 RAD21 EGR1 SCRT2 ATF7 RUNX3 SMARCA5 GSN PSMD5 CNTRL FBXW2 RAB14 PSMD5-AS1 MRRF STOM LOC102723324 C5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CNTRL on UCSC Golden Path with GeneCards custom track

Promoters for CNTRL Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000240839 137 1601 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766

Genomic Location for CNTRL Gene

Chromosome:
9
Start:
121,074,863 bp from pter
End:
121,177,610 bp from pter
Size:
102,748 bases
Orientation:
Plus strand

Genomic View for CNTRL Gene

Genes around CNTRL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CNTRL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CNTRL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CNTRL Gene

Proteins for CNTRL Gene

  • Protein details for CNTRL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z7A1-CNTRL_HUMAN
    Recommended name:
    Centriolin
    Protein Accession:
    Q7Z7A1
    Secondary Accessions:
    • A2A2Y1
    • B2RP67
    • Q3MN79
    • Q5FWF8
    • Q5JVD0
    • Q6MZR3
    • Q6PKC1
    • Q8TEP3
    • Q9Y489

    Protein attributes for CNTRL Gene

    Size:
    2325 amino acids
    Molecular mass:
    268886 Da
    Quaternary structure:
    • Interacts with HOOK2. Interacts with EXOC6 and SNAPIN. Associates with the exocyst complex.
    SequenceCaution:
    • Sequence=AAH02932.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=AAH02932.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH89415.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

    Alternative splice isoforms for CNTRL Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CNTRL Gene

Post-translational modifications for CNTRL Gene

  • Ubiquitination at posLast=101101 and Lys1170
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for CNTRL Gene

Domains & Families for CNTRL Gene

Gene Families for CNTRL Gene

Human Protein Atlas (HPA):
  • Cancer-related genes
  • Disease related genes
  • Plasma proteins
  • Predicted intracellular proteins

Protein Domains for CNTRL Gene

Suggested Antigen Peptide Sequences for CNTRL Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CNTRL: view

No data available for UniProtKB/Swiss-Prot for CNTRL Gene

Function for CNTRL Gene

Molecular function for CNTRL Gene

UniProtKB/Swiss-Prot Function:
Involved in cell cycle progression and cytokinesis. During the late steps of cytokinesis, anchors exocyst and SNARE complexes at the midbody, thereby allowing secretory vesicle-mediated abscission.

Phenotypes From GWAS Catalog for CNTRL Gene

Gene Ontology (GO) - Molecular Function for CNTRL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004713 protein tyrosine kinase activity TAS --
GO:0005515 protein binding IPI 17140400
genes like me logo Genes that share ontologies with CNTRL: view
genes like me logo Genes that share phenotypes with CNTRL: view

Animal Model Products

CRISPR Products

miRNA for CNTRL Gene

miRTarBase miRNAs that target CNTRL

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CNTRL Gene

Localization for CNTRL Gene

Subcellular locations from UniProtKB/Swiss-Prot for CNTRL Gene

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Midbody, Midbody ring.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CNTRL gene
Compartment Confidence
cytoskeleton 5
cytosol 5
nucleus 3

Subcellular locations from the

Human Protein Atlas (HPA)
  • Centrosome (3)
  • Cytosol (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for CNTRL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005813 centrosome IDA 15337773
GO:0005815 microtubule organizing center IEA --
GO:0005829 cytosol TAS --
GO:0005856 cytoskeleton IEA --
genes like me logo Genes that share ontologies with CNTRL: view

Pathways & Interactions for CNTRL Gene

genes like me logo Genes that share pathways with CNTRL: view

SIGNOR curated interactions for CNTRL Gene

Is activated by:

Gene Ontology (GO) - Biological Process for CNTRL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000086 G2/M transition of mitotic cell cycle TAS --
GO:0000278 mitotic cell cycle IEA --
GO:0007049 cell cycle IEA --
GO:0010389 regulation of G2/M transition of mitotic cell cycle TAS --
GO:0018108 peptidyl-tyrosine phosphorylation IEA --
genes like me logo Genes that share ontologies with CNTRL: view

Drugs & Compounds for CNTRL Gene

No Compound Related Data Available

Transcripts for CNTRL Gene

Unigene Clusters for CNTRL Gene

Centriolin:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for CNTRL Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ 18a · 18b · 18c ^ 19a · 19b ^
SP1: - - - - -
SP2:
SP3: - - -
SP4: - - -
SP5: - -
SP6:
SP7:

ExUns: 20a · 20b ^ 21a · 21b · 21c ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26 ^ 27a · 27b ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36
SP1: - -
SP2: - - -
SP3: -
SP4:
SP5:
SP6:
SP7:

Relevant External Links for CNTRL Gene

GeneLoc Exon Structure for
CNTRL
ECgene alternative splicing isoforms for
CNTRL

Expression for CNTRL Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CNTRL Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CNTRL Gene

This gene is overexpressed in Testis (x4.2).

Protein differential expression in normal tissues from HIPED for CNTRL Gene

This gene is overexpressed in Peripheral blood mononuclear cells (12.5), Plasma (10.7), Lymph node (7.3), and Esophagus (7.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for CNTRL Gene



NURSA nuclear receptor signaling pathways regulating expression of CNTRL Gene:

CNTRL

SOURCE GeneReport for Unigene cluster for CNTRL Gene:

Hs.653263

mRNA Expression by UniProt/SwissProt for CNTRL Gene:

Q7Z7A1-CNTRL_HUMAN
Tissue specificity: Widely expressed with highest levels in testis and trachea.

Evidence on tissue expression from TISSUES for CNTRL Gene

  • Spleen(4.3)
  • Liver(4.1)
genes like me logo Genes that share expression patterns with CNTRL: view

Primer Products

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for CNTRL Gene

Orthologs for CNTRL Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CNTRL Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CEP110 33 34
  • 99.66 (n)
dog
(Canis familiaris)
Mammalia CNTRL 33 34
  • 86.83 (n)
cow
(Bos Taurus)
Mammalia CNTRL 33 34
  • 86.45 (n)
mouse
(Mus musculus)
Mammalia Cep110 33 34
  • 82.88 (n)
Cntrl 16
rat
(Rattus norvegicus)
Mammalia Cntrl 33
  • 82.35 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia CNTRL 34
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CNTRL 34
  • 64 (a)
OneToOne
chicken
(Gallus gallus)
Aves CNTRL 34
  • 57 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 67 (a)
OneToMany
-- 34
  • 57 (a)
OneToMany
-- 34
  • 49 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia cntrl 33
  • 61.19 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.6532 33
zebrafish
(Danio rerio)
Actinopterygii LOC100334259 33
  • 52.47 (n)
CU856237.1 34
  • 32 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SDS22 34
  • 19 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 31 (a)
OneToOne
Species where no ortholog for CNTRL was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CNTRL Gene

ENSEMBL:
Gene Tree for CNTRL (if available)
TreeFam:
Gene Tree for CNTRL (if available)

Paralogs for CNTRL Gene

Paralogs for CNTRL Gene

(3) SIMAP similar genes for CNTRL Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with CNTRL: view

Variants for CNTRL Gene

Sequence variations from dbSNP and Humsavar for CNTRL Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000035596 -- 121,082,767(+) GAGTT(-/CGAGA)CCAGC intron-variant
rs1000042231 -- 121,165,869(+) ATTAT(C/G/T)TGTAA intron-variant
rs1000057480 -- 121,111,471(+) ATGCA(C/T)GACTT intron-variant
rs1000080109 -- 121,081,741(+) AGACA(A/C)CTCCA intron-variant
rs1000140158 -- 121,127,979(+) TCATC(A/C)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CNTRL Gene

Variant ID Type Subtype PubMed ID
esv1148139 CNV deletion 17803354
esv23303 CNV loss 19812545
esv2656882 CNV deletion 23128226
esv2671048 CNV deletion 23128226
esv2675601 CNV deletion 23128226
esv2738999 CNV deletion 23290073
esv3545409 CNV deletion 23714750
esv3621659 CNV loss 21293372
esv3621660 CNV loss 21293372
nsv1076202 CNV deletion 25765185
nsv825071 CNV loss 20364138
nsv956112 CNV deletion 24416366

Variation tolerance for CNTRL Gene

Residual Variation Intolerance Score: 23.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 14.83; 96.71% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CNTRL Gene

Human Gene Mutation Database (HGMD)
CNTRL
SNPedia medical, phenotypic, and genealogical associations of SNPs for
CNTRL

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CNTRL Gene

Disorders for CNTRL Gene

MalaCards: The human disease database

(2) MalaCards diseases for CNTRL Gene - From: HGMD, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
hypertrophy of breast
  • breasts enlarged
8p11 myeloproliferative syndrome
  • 8p11 stem cell leukemia/lymphoma syndrome
- elite association - COSMIC cancer census association via MalaCards
Search CNTRL in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

CNTRL_HUMAN
  • Note=A chromosomal aberration involving CEP110 may be a cause of stem cell myeloproliferative disorder (MPD). Translocation t(8;9)(p12;q33) with FGFR1. MPD is characterized by myeloid hyperplasia, eosinophilia and T-cell or B-cell lymphoblastic lymphoma. In general it progresses to acute myeloid leukemia. The fusion protein CEP110-FGFR1 is found in the cytoplasm, exhibits constitutive kinase activity and may be responsible for the transforming activity.

Relevant External Links for CNTRL

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CNTRL
genes like me logo Genes that share disorders with CNTRL: view

No data available for Genatlas for CNTRL Gene

Publications for CNTRL Gene

  1. Centriolin anchoring of exocyst and SNARE complexes at the midbody is required for secretory-vesicle-mediated abscission. (PMID: 16213214) Gromley A … Doxsey SJ (Cell 2005) 3 4 22 60
  2. A novel human protein of the maternal centriole is required for the final stages of cytokinesis and entry into S phase. (PMID: 12732615) Gromley A … Doxsey S (The Journal of cell biology 2003) 3 4 22 60
  3. FGFR1 is fused to the centrosome-associated protein CEP110 in the 8p12 stem cell myeloproliferative disorder with t(8;9)(p12;q33). (PMID: 10688839) Guasch G … Pébusque MJ (Blood 2000) 2 3 4 60
  4. Hook2 localizes to the centrosome, binds directly to centriolin/CEP110 and contributes to centrosomal function. (PMID: 17140400) Szebenyi G … Krämer H (Traffic (Copenhagen, Denmark) 2007) 3 4 60
  5. Humoral detection of leukaemia-associated antigens in presentation acute myeloid leukaemia. (PMID: 16112646) Guinn BA … Mufti GJ (Biochemical and biophysical research communications 2005) 3 4 60

Products for CNTRL Gene

Sources for CNTRL Gene

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