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Aliases for CNTN4-AS1 Gene

Subcategory (RNA class) for CNTN4-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for CNTN4-AS1 Gene

  • CNTN4 Antisense RNA 1 2 3
  • CNTN4 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CNTN4-AS1 Gene

ORGUL Members for CNTN4-AS1 Gene

Summaries for CNTN4-AS1 Gene

GeneCards Summary for CNTN4-AS1 Gene

CNTN4-AS1 (CNTN4 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CNTN4-AS1 Gene

Genomics for CNTN4-AS1 Gene

Genomic Location for CNTN4-AS1 Gene

Start:
3,039,033 bp from pter
End:
3,061,145 bp from pter
Size:
22,113 bases
Orientation:
Minus strand

Genomic View for CNTN4-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CNTN4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CNTN4-AS1 Gene

No data available for Regulatory Elements for CNTN4-AS1 Gene

Proteins for CNTN4-AS1 Gene

Post-translational modifications for CNTN4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CNTN4-AS1 Gene

Domains for CNTN4-AS1 Gene

Gene Families for CNTN4-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with CNTN4-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for CNTN4-AS1 Gene

Function for CNTN4-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CNTN4-AS1 Gene

Localization for CNTN4-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for CNTN4-AS1 Gene

Pathways for CNTN4-AS1 Gene

SuperPathways for CNTN4-AS1 Gene

No Data Available

Interacting Proteins for CNTN4-AS1 Gene

Gene Ontology (GO) - Biological Process for CNTN4-AS1 Gene

None

No data available for Pathways by source for CNTN4-AS1 Gene

Transcripts for CNTN4-AS1 Gene

mRNA/cDNA for CNTN4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CNTN4-AS1 Gene

No ASD Table

Relevant External Links for CNTN4-AS1 Gene

GeneLoc Exon Structure for
CNTN4-AS1
ECgene alternative splicing isoforms for
CNTN4-AS1

Expression for CNTN4-AS1 Gene

mRNA expression in normal human tissues for CNTN4-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CNTN4-AS1 Gene

This gene is overexpressed in Artery - Aorta (5.2) and Artery - Tibial (4.5).
genes like me logo Genes that share expressions with CNTN4-AS1: view

Orthologs for CNTN4-AS1 Gene

Evolution for CNTN4-AS1 Gene

ENSEMBL:
Gene Tree for CNTN4-AS1 (if available)
TreeFam:
Gene Tree for CNTN4-AS1 (if available)

No data available for Orthologs for CNTN4-AS1 Gene

Paralogs for CNTN4-AS1 Gene

No data available for Paralogs for CNTN4-AS1 Gene

Variants for CNTN4-AS1 Gene

Sequence variations from dbSNP and Humsavar for CNTN4-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs163575 -- 3,058,749(-) ACAGC(A/T)GGGAT intron-variant
rs163576 -- 3,058,965(+) ggctt(C/G/T)tcttc intron-variant
rs163577 -- 3,059,103(+) TAGCA(C/T)TTTGC intron-variant
rs163578 -- 3,059,132(+) TGCCA(C/T)AGCAA intron-variant
rs163579 -- 3,059,381(+) ACTGG(C/T)TGTAA intron-variant

Relevant External Links for CNTN4-AS1 Gene

HapMap Linkage Disequilibrium report
CNTN4-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for CNTN4-AS1 Gene

Disorders for CNTN4-AS1 Gene

No disorders were found for CNTN4-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for CNTN4-AS1 Gene

Publications for CNTN4-AS1 Gene

No publications were found for CNTN4-AS1 Gene.

Products for CNTN4-AS1 Gene

Sources for CNTN4-AS1 Gene

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