Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CMAHP Gene

pseudogene   GIFtS: 38
GCID: GC06M025082

cytidine monophospho-N-acetylneuraminic acid hydroxylase,...

(Previous name: cytidine monophosphate-N-acetylneuraminic acid hydroxylase...)
(Previous symbol: CMAH)
 Explore 3 diseases affiliated with
CMAHP via our new
 Human Malady Compendium 
Biological research products
for CMAHP
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cytidine Monophospho-N-Acetylneuraminic Acid Hydroxylase, Pseudogene1 2     CMP-NeuAc Hydroxylase-Like Protein3
CMAH1 2 3 5     Cytidine Monophosphate-N-Acetylneuraminic Acid Hydroxylase Pseudogene3
Cytidine Monophosphate-N-Acetylneuraminic Acid Hydroxylase
(CMP-N-Acetylneuraminate Monooxygenase)(Pseudogene)1
     EC 1.14.18.28
CSAH2     

External Ids:    HGNC: 20981   Entrez Gene: 84182   Ensembl: ENSG000001684057   OMIM: 6032095   UniProtKB: Q9Y4713   

Export aliases for CMAHP gene to outside databases


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CMAHP:
Sialic acids are terminal components of the carbohydrate chains of glycoconjugates involved in ligand-receptor,
cell-cell, and cell-pathogen interactions. The two most common forms of sialic acid found in mammalian cells are
N-acetylneuraminic acid (Neu5Ac) and its hydroxylated derivative, N-glycolylneuraminic acid (Neu5Gc). Studies of
sialic acid distribution show that Neu5Gc is not detectable in normal human tissues although it was an abundant sialic
acid in other mammals. Neu5Gc is, in actuality, immunogenic in humans. The absense of Neu5Gc in humans is due to a
deletion within the human gene CMAH encoding cytidine monophosphate-N-acetylneuraminic acid hydroxylase, an enzyme
responsible for Neu5Gc biosynthesis. Sequences encoding the mouse, pig, and chimpanzee hydroxylase enzymes were
obtained by cDNA cloning and found to be highly homologous. However, the homologous human cDNA differs from these
cDNAs by a 92-bp deletion in the 5' region. This deletion, corresponding to exon 6 of the mouse hydroxylase gene,
causes a frameshift mutation and premature termination of the polypeptide chain in human. It seems unlikely that the
truncated human hydroxylase mRNA encodes for an active enzyme explaining why Neu5Gc is undetectable in normal human
tissues. Human genomic DNA also shows evidence of this deletion which does not occur in the genomes of African great
apes. Nonetheless, the CMAH gene maps to 6p21.32 in humans and great apes indicating that mutation of the CMAH gene
occurred following human divergence from chimpanzees and bonobos. (provided by RefSeq, Jul 2008)

Gene Wiki entry for CMAHP (CMAH)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for CMAHP
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for CMAHP

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CMAHP


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.32   Ensembl cytogenetic band:  6p22.2   HGNC cytogenetic band: 6p23-p22

CMAHP Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CMAHP gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M025082:  view genomic region     (about GC identifiers)

Start:
25,081,295 bp from pter      End:
25,218,698 bp from pter
Size:
137,404 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CMAH_HUMAN, Q9Y471 (See protein sequence)
Recommended Name: Putative cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like protein  
Size: 72 amino acids; 8042 Da
Caution: Could be the product of a pseudogene. An Alu-mediated inactivating mutation of this gene occured in common
ancestors of humans and Neanderthals approximately 2.1-2.2 million years ago, before brain expansion. The resulting
product is a truncated and most probably inactive enzyme explaining the absence CMP-Neu5Gc sialic acid in human, while
it is abundantly expressed at the surface of many cells in other vertebrates (PubMed:9751737 and PubMed:12192086)
Sequence caution: Sequence=BAA31160.1; Type=Erroneous translation; Note=Wrong choice of CDS; Sequence=BAA31198.1;
Type=Erroneous gene model prediction; Sequence=CAI20561.1; Type=Erroneous gene model prediction; Sequence=CAI20562.1;
Type=Erroneous gene model prediction; Sequence=CAI20563.1; Type=Erroneous gene model prediction; Sequence=CAI20564.1;
Type=Erroneous gene model prediction;
Secondary accessions: O95250 Q5TD41 Q5TD42 Q5TD43 Q5TD44 Q68DC3 Q9UEE7

Explore the universe of human proteins at neXtProt for CMAHP: NX_Q9Y471

2 DME Specific Peptides for CMAHP (Q9Y471)
 KSRLRACKN  QTTEILLCLSPVEVA 

CMAHP Protein expression data from MOPED and PaxDb:    About this image 
Estimated protein expression log10 (pmol).


ENSEMBL proteins: 
 ENSP00000367232   ENSP00000367228   ENSP00000382283   ENSP00000401225   ENSP00000397893  
 ENSP00000406449  

Human Recombinant Protein Products: 
Browse Purified and Recombinant Proteins at EMD Millipore
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
Browse OriGene Protein Over-expression Lysates
OriGene Custom Protein Services for CMAHP 
GenScript Custom Purified and Recombinant Proteins Services for CMAHP
Novus Biologicals CMAHP Protein
Browse Sino Biological Recombinant Proteins
Browse ProSpec Recombinant Proteins
Browse Proteins at Uscn

Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005737cytoplasm IEA--


CMAHP for ontologies           About GeneDecksing



CMAHP Antibody Products: 
Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Browse R&D Systems for Antibodies
Browse OriGene Antibodies
OriGene Custom Antibody Services for CMAHP 
GenScript Custom Superior Antibodies Services for CMAHP
Novus Biologicals CMAHP Antibodies
Search for Antibodies for CMAHP at Abcam  
Browse Antibodies at Uscn
Search ThermoFisher Antibodies for CMAHP

Assay Products for CMAHP: 
Browse Kits and Assays available from EMD Millipore
OriGene Custom Immunoassay Development
Browse OriGene Fluorogenic Cell Assay Kits
Browse R&D Systems for biochemical assays
GenScript Custom Assay Services for CMAHP
Browse Enzo Life Sciences for kits & assays
Browse ELISAs and CLIAs at Uscn


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

CMAHP for domains           About GeneDecksing

1 InterPro domain/family:
 IPR017941 Rieske_2Fe-2S

Graphical View of Domain Structure for InterPro Entry Q9Y471

ProtoNet protein and cluster: Q9Y471

UniProtKB/Swiss-Prot: CMAH_HUMAN, Q9Y471
Similarity: Belongs to the CMP-Neu5Ac hydroxylase family
Similarity: Contains 1 Rieske domain


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Enzyme Number (IUBMB): EC 1.14.18.22

miRNA
Products:
    
Browse 3'-UTR reporter clones for miRNA target validation
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CMAHP
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CMAHP
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
    
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CMAHP (see all 6)
Browse OriGene siRNA
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CMAHP

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for CMAHP

Clone
Products:
     
Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CMAHP (see all 4)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript Custom all cDNA clones Services for CMAHP
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for CMAHP
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat CMAHP 

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for CMAHP
Search LifeMap BioReagents cell lines for CMAHP

In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CMAHP

Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0030338NOT CMP-N-acetylneuraminate monooxygenase activity NAS9751737
GO:00515372 iron, 2 sulfur cluster binding IEA--


CMAHP for ontologies           About GeneDecksing


Animal Models:
     Mouse knock-outs for CMAHP: Cmahtm1Ykoz Cmahtm1Avrk
     9 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Cmah):
 behavior/neurological  cellular  hearing/vestibular/ear  hematopoietic system  homeostasis/metabolism 
 immune system  mortality/aging  muscle  nervous system 

CMAHP for phenotypes           About GeneDecksing


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section



Interactions:

    Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CMAHP

Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0008150biological_process ND--
GO:0046381CMP-N-acetylneuraminate metabolic process IEA--


CMAHP for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

CMAHP for compounds           About GeneDecksing

Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for CMAHP
2 Novoseek chemical compound relationships for CMAHP gene    About this table
Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
n-glycolylneuraminic acid 97.5 10 20047559 (2), 12880951 (1), 9343941 (1), 20445087 (1) (see all 7)
sialic acid 79.1 9 12880951 (1), 19666593 (1), 12192086 (1), 18777136 (1) (see all 6)

Search CenterWatch for drugs/clinical trials and news about CMAHP 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

Unigene Cluster for CMAHP:

Cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene
Hs.484918  [show with all ESTs]
Unigene Representative Sequence: AK000716
11 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000377993(uc003ner.4) ENST00000377989(uc003nes.3 uc003new.3)
ENST00000471416 ENST00000493257 ENST00000490939 ENST00000493981 ENST00000399346
ENST00000458373 ENST00000462823 ENST00000436589 ENST00000424282(uc011djv.1)


miRNA
Products:
     
Browse 3'-UTR reporter clones for miRNA target validation
Browse OriGene MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CMAHP
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CMAHP
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
     
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CMAHP (see all 6)
Browse OriGene siRNA
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CMAHP
Clone
Products:
     
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CMAHP (see all 4)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript Custom all cDNA clones Services for CMAHP
DNA2.0 Custom Codon Optimized Gene Synthesis Service for CMAHP
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat CMAHP 
Primer
Products:
    
Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat CMAHP
  Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CMAHP
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CMAHP

Additional cDNA sequence: 

AK000716.1 AK126231.1 AK303297.1 BC022302.1 BC032500.1 BC059791.1 D86324.1 FJ794466.1 
NR_002174.2 NR_027626.1 

20 DOTS entries:

DT.100779448  DT.75141068  DT.40244723  DT.99995337  DT.210905  DT.40118908  DT.86849482  DT.92429687 
DT.97810275  DT.121306771  DT.121306977  DT.99980130  DT.121306907  DT.121306960  DT.99969112  DT.100752274 
DT.102842970  DT.121306976  DT.309099  DT.92429681 

24/144 AceView cDNA sequences (see all 144):

CR749466 BQ723142 CA447777 BQ183261 CR595916 AI275975 BQ573819 BU677545 
AA287350 CR611086 AA700274 CA312822 AK126231 AW519185 AA905192 CA413870 
BC022302 AF074480 AI743456 BM995548 CB269549 AI282402 BC032500 AA664405 

GeneLoc Exon Structure

5/15 Alternative Splicing Database (ASD) splice patterns (SP) for CMAHP (see all 15)    About this scheme

ExUns: 1a · 1b ^ 2a · 2b · 2c · 2d · 2e ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b · 5c ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b · 11c · 11d ·
SP1:                                                        -     -                 -                                         -     -     -                 -   
SP2:                                                        -     -                 -                                         -     -     -                 -   
SP3:              -     -     -     -     -                 -     -                 -                                                                           
SP4:                                                                                                                                                        -   
SP5:                                      -                 -     -                 -     -     -     -     -                 -     -                           

ExUns: 11e ^ 12 ^ 13a · 13b ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18a · 18b · 18c · 18d
SP1:  -                                   -     -           -                     
SP2:  -                                   -     -                                 
SP3:                                                                              
SP4:  -                                   -     -                                 
SP5:                                                                              


ECgene alternative splicing isoforms for CMAHP

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

CMAHP expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CATAACAATA

Microarray
RNAseq (Illumina Body Map)
(100×FPKM)½
SAGE (Serial Analysis of Gene Expression)

About this image

CMAHP expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
3 LifeMap In Vivo Development Anatomical Compartments/Cells 
Tissue Anatomical Compartment CellCategory (developmental path)
Extraembryonic MesodermExtraembryonic Capillary PlexusExtraembryonic AngioblastsEndothelium
AdiposeBody Subcutaneous White AdiposeAdipose
AdiposeThoracic Perivascular AdiposeAdipose
Expression: Positive    Negative     Selective marker
Experimental details: Curated     Microarrays     In-situ hybridization
Stem Cell Differentiation: 4 LifeMap Cells 
NameCategory
PureStem™ progenitor T42 (Embryonic Progenitor Cell)
PureStem™ mesenchymal progenitor 4D20.8 (Embryonic Progenitor Cell)Lateral Plate Mesoderm, Neural Crest
PureStem™ progenitor EN2 (Embryonic Progenitor Cell)
PureStem™ progenitor T36 (Embryonic Progenitor Cell)

See CMAHP Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for CMAHP

SOURCE GeneReport for Unigene cluster: Hs.484918

UniProtKB/Swiss-Prot: CMAH_HUMAN, Q9Y471
Tissue specificity: Widely expressed. Highly expressed in thymus. Not expressed in brain

    SABiosciences Custom PCR Arrays for CMAHP
Primer
Products:
Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat CMAHP
Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CMAHP
QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CMAHP
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CMAHP

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for CMAHP gene from 3/7 species (see all 7)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Cmah5 cytidine monophospho-N-acetylneuraminic acid hydroxylase   --   13 (10.34 cM) 24376083 
lizard
(Anolis carolinensis)
Reptilia CMAHP6
--
65(a)
1 ↔ 1
4(53678268-53724075)
zebrafish
(Danio rerio)
Actinopterygii cmah6
cytidine monophospho-N-acetylneuraminic acid hydro...
56(a)
1 ↔ 1
4(2091681-2111243)


ENSEMBL Gene Tree for CMAHP (if available)
TreeFam Gene Tree for CMAHP (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
  --

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/1119 NCBI SNPs in CMAHP are shown (see all 1119    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 6 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs3030111,2
C,F,H,--25080848(-) TGAATG/TCCTCA 1 -- int116Minor allele frequency- T:0.13NS EA NA WA 2136
rs1460853961,2
C,--25080894(+) GGAGG-/AAAAAT 1 -- int10--------
rs1130904791,2
--25080934(+) TTGAGG/TTTCCT 1 -- int11Minor allele frequency- T:0.00CSA 1
rs1923466311,2
--25080957(+) CTTGGC/TAGCAG 1 -- int10--------
rs1417720181,2
--25081001(+) TATTCG/TGAAGA 1 -- int10--------
rs94610971,2
C,F,--25081018(+) TGACAA/GTTTGT 1 -- int11Minor allele frequency- G:0.03WA 118
rs775811311,2
C,F,--25081123(+) CAGGAA/GATGTG 1 -- int13Minor allele frequency- G:0.04WA NA EA 358
rs1837726801,2
--25081136(+) GTATAC/TGCGAG 1 -- int10--------
rs772312821,2
F,--25081215(+) TCAAAG/TAACTG 1 -- int11Minor allele frequency- T:0.02WA 118
rs1891475541,2
--25081391(+) TGAATA/CATTTA 1 -- nc-transcript-variant0--------

HapMap Linkage Disequilibrium report for CMAHP (25081295 - 25218698 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
      Database of Genomic Variants (DGV) variations for CMAHP: --

SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CMAHP
DNA2.0 Custom Variant and Variant Library Synthesis for CMAHP

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

CMAHP for disorders           About GeneDecksing

OMIM gene information: 603209    OMIM disorders: --

3 diseases for CMAHP:    About MalaCards
charge syndrome    acne    malaria

1 Novoseek disease relationship for CMAHP gene    About this table

Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
melanoma 4.02 1 8262898 (1)


Export disorders for CMAHP gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for CMAHP gene, integrated from 9 sources (see all 36):
(articles sorted by number of sources associating them with CMAHP)
    Utopia: connect your pdf to the dynamic
world of online information

  1. The molecular basis for the absence of N-glycolylneuraminic acid in humans. (PubMed id 9624188)1, 2, 3, 9 Irie A....Suzuki A. (1998)
  2. Inactivation of CMP-N-acetylneuraminic acid hydroxylase occurred prior to brain expansion during human evolution. (PubMed id 12192086)1, 2, 9 Chou H.-H.... Varki A. (2002)
  3. Molecular cloning of cytidine monophospho-N-acetylneuraminic acid hydroxylase. Regulation of species- and tissue-specific expression of N-glycolylneuraminic acid. (PubMed id 7608218)1, 3, 9 Kawano T....Suzuki A. (1995)
  4. A mutation in human CMP-sialic acid hydroxylase occurred after the Homo-Pan divergence. (PubMed id 9751737)1, 2, 9 Chou H.-H.... Varki A. (1998)
  5. Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene. (PubMed id 11562455)1, 2, 9 Hayakawa T.... Takahata N. (2001)
  6. The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)1, 2 Mungall A.J.... Beck S. (2003)
  7. Human CMP-N-acetylneuraminic acid hydroxylase is a no vel stem cell marker linked to stem cell-specific mechanisms. (PubMed id 19890979)1, 9 Nystedt J....Laine J. (2010)
  8. CMP-N-Acetylneuraminic acid hydroxylase is exclusively inactive in humans. (PubMed id 9675135)1, 9 Irie A. and Suzuki A. (1998)
  9. Fixation of the human-specific CMP-N-acetylneuraminic acid hydroxylase pseudogene and implications of haplotype diversity for human evolution. (PubMed id 16272417)1, 9 Hayakawa T....Takahata N. (2006)
  10. N-glycolylneuraminic acid deficiency in humans. (PubMed id 11522390)1, 9 Varki A. (2001)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Disorders
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 8418 HGNC: 2098 AceView: CMAH Ensembl:ENSG00000168405 euGenes: HUgn8418
ECgene: CMAHP H-InvDB: CMAHP

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for CMAHP Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for CMAHP gene:
Search GeneIP for patents involving CMAHP

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section

 
 EMD Millipore Custom Antibody & Bulk Services
 EMD Millipore Preclinical / Clinical Development Services
 EMD Millipore Immunoassay Services
 EMD Millipore Target Screening & Profiling Services

  
 Browse Antibodies   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
 Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
 Browse OriGene Antibodies   Browse OriGene shRNA RFPs  
 OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CMAHP   Browse OriGene genome-wide validated SYBR primer pairs  
 Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
 Browse OriGene siRNAs   Browse 3'-UTR reporter clones for miRNA target validation  
 Browse OriGene untagged cDNA clones in CMV expression vector   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CMAHP  
 Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
 Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
 Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for CMAHP   OriGene Custom Protein Services for CMAHP  
 OriGene Custom Immunoassay Development  

 
 
 QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CMAHP
 QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CMAHP
 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CMAHP
 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CMAHP
 QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CMAHP
 Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CMAHP
 GenScript Custom Purified and Recombinant Proteins Services for CMAHP GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for CMAHP
 GenScript Custom Assay Services for CMAHP GenScript Custom Superior Antibodies Services for CMAHP
 GenScript Custom overexpressing Cell Line Services for CMAHP CloneReady with Over 120,000 Genes
 Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
 Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
 Custom Peptide Services
 Search for Antibodies & Assays

 Search Regulatory tfbs for CMAHP
 Search Chromatin IP Primers for CMAHP
 Search RT2 qPCR Primer Assays in human, mouse, rat CMAHP
 Search GNC Networks for CMAHP
 SABiosciences Custom PCR Arrays for CMAHP
 Search Tocris compounds for CMAHP
 Browse Sino Biological Proteins and Antibodies
 Browse Sino Biological cDNA Clones
 Antibodies/Proteins Production Services
 Rabbit Monoclonal Antibody Platform
 Bulk Purchasing
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
 Novus Tissue Slides
 CMAHP antibodies
 CMAHP proteins
 Search for Antibodies for CMAHP at Abcam
 See all of Abcam's Antibodies, Kits and Proteins for CMAHP
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins




 Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
 Search LifeMap BioReagents cell lines for CMAHP
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CMAHP
 Browse SwitchGear 3'UTR luciferase reporter plasmids for CMAHP
 Browse SwitchGear Promoter luciferase reporter plasmids for CMAHP
 Search ThermoFisher Antibodies for CMAHP
 Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat CMAHP
       
GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

View Random Gene

Category
VWF
(GIFTS: 73)
von Willebrand factor
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      CMAHP gene at Home site.
hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4