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Aliases for CLYBL-AS2 Gene

Subcategory (RNA class) for CLYBL-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CLYBL-AS2 Gene

  • CLYBL Antisense RNA 2 2 3 5
  • CLYBL Antisense RNA 2 (Non-Protein Coding) 2

External Ids for CLYBL-AS2 Gene

Previous GeneCards Identifiers for CLYBL-AS2 Gene

  • GC00U933281
  • GC13M100343

Summaries for CLYBL-AS2 Gene

GeneCards Summary for CLYBL-AS2 Gene

CLYBL-AS2 (CLYBL Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLYBL-AS2 Gene

Genomics for CLYBL-AS2 Gene

Regulatory Elements for CLYBL-AS2 Gene

Enhancers for CLYBL-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G099685 2.6 VISTA Ensembl ENCODE dbSUPER 0.7 +2.5 2472 6.1 ELF3 PKNOX1 ZNF2 TCF12 GATA2 CREM CEBPB JUNB PRDM6 SMARCA4 CLYBL DOCK9-AS2 CLYBL-AS2 GC13P099679
GH13G099693 0.8 ENCODE dbSUPER 0.7 -3.3 -3263 1.5 TCF12 PKNOX1 PRDM6 POLR2A SMARCA4 ZNF223 CLYBL-AS2 CLYBL-AS1
GH13G099691 0.7 ENCODE dbSUPER 0.7 -0.8 -781 0.2 PRDM4 SPI1 CLYBL-AS2 CLYBL-AS1
GH13G099701 0.8 ENCODE dbSUPER 0.4 -12.0 -12021 2.0 ZNF202 CTCF RNF2 POU5F1 CHD7 CLYBL-AS1 CLYBL CLYBL-AS2
GH13G099681 0.7 ENCODE dbSUPER 0.4 +9.1 9109 0.5 SCRT1 SMARCA4 CLYBL-AS1 GC13P099679 CLYBL-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLYBL-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CLYBL-AS2 Gene

Chromosome:
13
Start:
99,690,081 bp from pter
End:
99,690,971 bp from pter
Size:
891 bases
Orientation:
Minus strand

Genomic View for CLYBL-AS2 Gene

Genes around CLYBL-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLYBL-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLYBL-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLYBL-AS2 Gene

Proteins for CLYBL-AS2 Gene

Post-translational modifications for CLYBL-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLYBL-AS2 Gene

Domains & Families for CLYBL-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLYBL-AS2 Gene

Function for CLYBL-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLYBL-AS2 Gene

Localization for CLYBL-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CLYBL-AS2 Gene

Pathways & Interactions for CLYBL-AS2 Gene

SuperPathways for CLYBL-AS2 Gene

No Data Available

Interacting Proteins for CLYBL-AS2 Gene

Gene Ontology (GO) - Biological Process for CLYBL-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLYBL-AS2 Gene

Drugs & Compounds for CLYBL-AS2 Gene

No Compound Related Data Available

Transcripts for CLYBL-AS2 Gene

mRNA/cDNA for CLYBL-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CLYBL-AS2 Gene

No ASD Table

Relevant External Links for CLYBL-AS2 Gene

GeneLoc Exon Structure for
CLYBL-AS2
ECgene alternative splicing isoforms for
CLYBL-AS2

Expression for CLYBL-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CLYBL-AS2 Gene

genes like me logo Genes that share expression patterns with CLYBL-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLYBL-AS2 Gene

Orthologs for CLYBL-AS2 Gene

Evolution for CLYBL-AS2 Gene

ENSEMBL:
Gene Tree for CLYBL-AS2 (if available)
TreeFam:
Gene Tree for CLYBL-AS2 (if available)

No data available for Orthologs for CLYBL-AS2 Gene

Paralogs for CLYBL-AS2 Gene

No data available for Paralogs for CLYBL-AS2 Gene

Variants for CLYBL-AS2 Gene

Sequence variations from dbSNP and Humsavar for CLYBL-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000178650 -- 99,692,552(+) CTCCC(A/G)AAGTG intron-variant, upstream-variant-2KB
rs1001366186 -- 99,691,565(+) TTGCC(A/G)CTGTG intron-variant, upstream-variant-2KB
rs1001754255 -- 99,692,265(+) TCATA(A/C)AGTTC intron-variant, upstream-variant-2KB
rs1002979885 -- 99,692,287(+) TTTGT(-/G)TTTTT intron-variant, upstream-variant-2KB
rs1003022510 -- 99,690,777(+) TCAAC(C/T)GGGGA intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CLYBL-AS2 Gene

Variant ID Type Subtype PubMed ID
esv2747875 CNV deletion 23290073
nsv832696 CNV gain 17160897

Relevant External Links for CLYBL-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLYBL-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CLYBL-AS2 Gene

Disorders for CLYBL-AS2 Gene

Relevant External Links for CLYBL-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CLYBL-AS2

No disorders were found for CLYBL-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLYBL-AS2 Gene

Publications for CLYBL-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CLYBL-AS2 Gene

Sources for CLYBL-AS2 Gene

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