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Aliases for CLYBL-AS1 Gene

Subcategory (RNA class) for CLYBL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CLYBL-AS1 Gene

  • CLYBL Antisense RNA 1 2 3 5
  • CLYBL Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CLYBL-AS1 Gene

Previous GeneCards Identifiers for CLYBL-AS1 Gene

  • GC00U933758
  • GC13M100379

Summaries for CLYBL-AS1 Gene

GeneCards Summary for CLYBL-AS1 Gene

CLYBL-AS1 (CLYBL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLYBL-AS1 Gene

Genomics for CLYBL-AS1 Gene

Regulatory Elements for CLYBL-AS1 Gene

Enhancers for CLYBL-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F099701 0.5 ENCODE 12.1 +26.0 26010 2.0 ZNF202 CTCF POU5F1 CLYBL-AS1 CLYBL CLYBL-AS2
GH13F099705 0.4 ENCODE 11.9 +24.9 24870 0.2 POU5F1 CLYBL-AS1 CLYBL-AS2
GH13F099681 0.4 ENCODE 11.2 +47.1 47139 0.5 SCRT1 SMARCA4 CLYBL-AS1 GC13P099679 CLYBL-AS2
GH13F099721 0.7 Ensembl ENCODE 6.2 +6.6 6588 1.5 SMARCA4 ZNF24 SPI1 CLYBL-AS1 CLYBL-AS2
GH13F099724 0.6 ENCODE 6 +3.7 3744 1.3 NRF1 CBFB JUNB EBF1 EED IKZF1 SCRT2 PRDM1 SPI1 CLYBL-AS1 CLYBL-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLYBL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CLYBL-AS1 Gene

Chromosome:
13
Start:
99,725,668 bp from pter
End:
99,729,001 bp from pter
Size:
3,334 bases
Orientation:
Minus strand

Genomic View for CLYBL-AS1 Gene

Genes around CLYBL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLYBL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLYBL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLYBL-AS1 Gene

Proteins for CLYBL-AS1 Gene

Post-translational modifications for CLYBL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLYBL-AS1 Gene

Domains & Families for CLYBL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLYBL-AS1 Gene

Function for CLYBL-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLYBL-AS1 Gene

Localization for CLYBL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CLYBL-AS1 Gene

Pathways & Interactions for CLYBL-AS1 Gene

SuperPathways for CLYBL-AS1 Gene

No Data Available

Interacting Proteins for CLYBL-AS1 Gene

Gene Ontology (GO) - Biological Process for CLYBL-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLYBL-AS1 Gene

Transcripts for CLYBL-AS1 Gene

mRNA/cDNA for CLYBL-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CLYBL-AS1 Gene

No ASD Table

Relevant External Links for CLYBL-AS1 Gene

GeneLoc Exon Structure for
CLYBL-AS1
ECgene alternative splicing isoforms for
CLYBL-AS1

Expression for CLYBL-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CLYBL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CLYBL-AS1 Gene

This gene is overexpressed in Testis (x38.4).
genes like me logo Genes that share expression patterns with CLYBL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CLYBL-AS1 Gene

Orthologs for CLYBL-AS1 Gene

Evolution for CLYBL-AS1 Gene

ENSEMBL:
Gene Tree for CLYBL-AS1 (if available)
TreeFam:
Gene Tree for CLYBL-AS1 (if available)

No data available for Orthologs for CLYBL-AS1 Gene

Paralogs for CLYBL-AS1 Gene

No data available for Paralogs for CLYBL-AS1 Gene

Variants for CLYBL-AS1 Gene

Sequence variations from dbSNP and Humsavar for CLYBL-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1105576 -- 99,728,175(+) TGTTT(C/T)GGTGG intron-variant
rs113614445 -- 99,729,900(+) TCCAC(C/G)ACCAT intron-variant, upstream-variant-2KB
rs114128739 -- 99,728,586(+) TTTCT(C/T)TTTAA intron-variant
rs115344419 -- 99,727,294(+) CTCTC(A/C/G)TCTTC intron-variant, nc-transcript-variant
rs115471384 -- 99,727,343(+) TGAGA(A/G)GAAAG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CLYBL-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2747875 CNV deletion 23290073
nsv832696 CNV gain 17160897

Relevant External Links for CLYBL-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLYBL-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CLYBL-AS1 Gene

Disorders for CLYBL-AS1 Gene

Relevant External Links for CLYBL-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CLYBL-AS1

No disorders were found for CLYBL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLYBL-AS1 Gene

Publications for CLYBL-AS1 Gene

No publications were found for CLYBL-AS1 Gene.

Products for CLYBL-AS1 Gene

Sources for CLYBL-AS1 Gene

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