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Aliases for CLUHP3 Gene

Aliases for CLUHP3 Gene

  • Clustered Mitochondria Homolog Pseudogene 3 2 3 5
  • Clustered Mitochondria (CluA/CLU1) Homolog Pseudogene 3 2 3 4
  • KIAA0664-Like 3 2 3
  • KIAA0664L3 3 4
  • C16orf67 3 4
  • Chromosome 16 Open Reading Frame 67 2
  • Up-Regulated In Lung Cancer 3 3
  • KIAA0664-Like Protein 3 4
  • KIAA0664 Pseudogene 3 2
  • KIAA0664P3 3
  • URLC3 3

External Ids for CLUHP3 Gene

Previous HGNC Symbols for CLUHP3 Gene

  • C16orf67
  • KIAA0664P3
  • KIAA0664L3

Summaries for CLUHP3 Gene

GeneCards Summary for CLUHP3 Gene

CLUHP3 (Clustered Mitochondria Homolog Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLUHP3 Gene

Genomics for CLUHP3 Gene

Regulatory Elements for CLUHP3 Gene

Enhancers for CLUHP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F031868 1.6 FANTOM5 Ensembl ENCODE 18 +169.3 169311 3.0 ATF1 PKNOX1 ARNT YBX1 FEZF1 YY1 ZNF766 ZNF143 FOS SP3 CLUHP3 ZNF267 ARMC5 ZNF720 ENSG00000259874 RBM22P13
GH16F031699 1.1 ENCODE 26 +0.5 474 2.2 HDGF PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CLUHP3 ENSG00000276867
GH16F031712 1.1 ENCODE 24.7 +13.7 13650 3.3 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 ZNF143 ZNF207 CLUHP3 ENSG00000260267 YBX3P1 ZNF720 GC16M031728
GH16F031695 0.9 Ensembl ENCODE 26.2 -4.7 -4690 1.4 PKNOX1 L3MBTL2 ETV1 MAX REST RAD51 PRDM10 MGA CLUHP3 ENSG00000260472 RBM22P12
GH16F031873 1.5 FANTOM5 ENCODE 8.7 +175.7 175697 6.5 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A YBX1 DMAP1 YY1 ZNF267 ARMC5 CLUHP3 PIR46248 GC16M031894
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLUHP3 on UCSC Golden Path with GeneCards custom track

Promoters for CLUHP3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for CLUHP3 Gene

31,700,590 bp from pter
31,711,986 bp from pter
11,397 bases
Plus strand

Genomic View for CLUHP3 Gene

Genes around CLUHP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLUHP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLUHP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLUHP3 Gene

Proteins for CLUHP3 Gene

  • Protein details for CLUHP3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative protein CLUHP3
    Protein Accession:
    Secondary Accessions:
    • Q9BW88

    Protein attributes for CLUHP3 Gene

    147 amino acids
    Molecular mass:
    16687 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CLUHP3 Gene

Post-translational modifications for CLUHP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLUHP3 Gene

Domains & Families for CLUHP3 Gene

Protein Domains for CLUHP3 Gene


Suggested Antigen Peptide Sequences for CLUHP3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CLUHP3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CLUHP3 Gene

Function for CLUHP3 Gene

genes like me logo Genes that share phenotypes with CLUHP3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLUHP3 Gene

Localization for CLUHP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CLUHP3 Gene

Pathways & Interactions for CLUHP3 Gene

SuperPathways for CLUHP3 Gene

No Data Available

Interacting Proteins for CLUHP3 Gene

Gene Ontology (GO) - Biological Process for CLUHP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for CLUHP3 Gene

Transcripts for CLUHP3 Gene

mRNA/cDNA for CLUHP3 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CLUHP3 Gene

Clustered mitochondria (cluA/CLU1) homolog pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CLUHP3 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b · 9c ^ 10
SP1: -
SP3: - -
SP4: -
SP5: -
SP6: - -
SP8: - -

Relevant External Links for CLUHP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CLUHP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CLUHP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of CLUHP3 Gene:


SOURCE GeneReport for Unigene cluster for CLUHP3 Gene:

genes like me logo Genes that share expression patterns with CLUHP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CLUHP3 Gene

Orthologs for CLUHP3 Gene

Evolution for CLUHP3 Gene

Gene Tree for CLUHP3 (if available)
Gene Tree for CLUHP3 (if available)

No data available for Orthologs for CLUHP3 Gene

Paralogs for CLUHP3 Gene

No data available for Paralogs for CLUHP3 Gene

Variants for CLUHP3 Gene

Sequence variations from dbSNP and Humsavar for CLUHP3 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs11150639 -- 31,701,366(+) ATTTC(G/T)AAGAA intron-variant
rs112389599 -- 31,707,914(+) ACACA(A/G)CAACT downstream-variant-500B
rs112734706 -- 31,701,124(+) CAAAT(A/G)ACGAC intron-variant
rs113131983 -- 31,705,611(+) GGGCC(A/G)CAGTT intron-variant
rs113279825 -- 31,705,742(+) TAGGG(A/T)CCCTG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CLUHP3 Gene

Variant ID Type Subtype PubMed ID
nsv953806 CNV deletion 24416366
nsv833195 CNV loss 17160897
nsv1057598 CNV gain 25217958
esv3570465 CNV gain 25503493
esv2714195 CNV deletion 23290073
esv2658959 CNV deletion 23128226

Relevant External Links for CLUHP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CLUHP3 Gene

Disorders for CLUHP3 Gene

Relevant External Links for CLUHP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CLUHP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLUHP3 Gene

Publications for CLUHP3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  4. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4 64
  5. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for CLUHP3 Gene

Sources for CLUHP3 Gene

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