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Aliases for CLK3P2 Gene

Subcategory (RNA class) for CLK3P2 Gene

antisense

Aliases for CLK3P2 Gene

  • CDC Like Kinase 3 Pseudogene 2 2 3 5
  • CDC-Like Kinase 3 Pseudogene 2 2

External Ids for CLK3P2 Gene

ORGUL Members for CLK3P2 Gene

Previous GeneCards Identifiers for CLK3P2 Gene

  • GC01M248102

Summaries for CLK3P2 Gene

GeneCards Summary for CLK3P2 Gene

CLK3P2 (CDC Like Kinase 3 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for CLK3P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLK3P2 Gene

Genomics for CLK3P2 Gene

Regulatory Elements for CLK3P2 Gene

Enhancers for CLK3P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H247368 0.9 Ensembl 10 +569.4 569413 0.2 ATF1 ZNF766 ELK1 RUNX3 CAVIN1 NCOA1 REST ZNF592 MEF2D SMARCA4 ZNF670-ZNF695 ZNF496 ZNF669 CLK3P2 AHCTF1 NLRP3
GH01H247858 0.8 ENCODE 10.6 +78.4 78412 0.5 BCOR HDAC1 PKNOX1 ARNT TAL1 CEBPG ZNF316 FOXK2 NCOR1 ZSCAN29 TRIM58 OR2AJ1 OR2T8 OR2X1P OR2L13 CLK3P2 PIR41167
GH01H247936 0.9 ENCODE 0.7 +0.4 350 1.2 HDAC1 TBP ATF1 RB1 TBL1XR1 ZBTB40 RAD21 CHAMP1 ZNF143 ATF7 OR2L13 CLK3P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLK3P2 on UCSC Golden Path with GeneCards custom track

Promoters for CLK3P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000023238 213 601 TBP ATF1 RB1 TBL1XR1 ARNT ZBTB40 RAD21 CHAMP1 ZNF143 ATF7

Genomic Locations for CLK3P2 Gene

Genomic Locations for CLK3P2 Gene
chr1:247,935,814-247,937,513
(GRCh38/hg38)
Size:
1,700 bases
Orientation:
Minus strand
chr1:248,099,116-248,100,815
(GRCh37/hg19)

Genomic View for CLK3P2 Gene

Genes around CLK3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLK3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLK3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLK3P2 Gene

Proteins for CLK3P2 Gene

Post-translational modifications for CLK3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLK3P2 Gene

Domains & Families for CLK3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLK3P2 Gene

Function for CLK3P2 Gene

Phenotypes From GWAS Catalog for CLK3P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLK3P2 Gene

Localization for CLK3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLK3P2 Gene

Pathways & Interactions for CLK3P2 Gene

SuperPathways for CLK3P2 Gene

No Data Available

Interacting Proteins for CLK3P2 Gene

Gene Ontology (GO) - Biological Process for CLK3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLK3P2 Gene

Drugs & Compounds for CLK3P2 Gene

No Compound Related Data Available

Transcripts for CLK3P2 Gene

mRNA/cDNA for CLK3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CLK3P2 Gene

No ASD Table

Relevant External Links for CLK3P2 Gene

GeneLoc Exon Structure for
CLK3P2
ECgene alternative splicing isoforms for
CLK3P2

Expression for CLK3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CLK3P2 Gene

mRNA differential expression in normal tissues according to GTEx for CLK3P2 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x6.2), Brain - Frontal Cortex (BA9) (x5.6), Brain - Cortex (x4.9), Brain - Substantia nigra (x4.6), Brain - Hypothalamus (x4.5), Brain - Putamen (basal ganglia) (x4.2), Brain - Anterior cingulate cortex (BA24) (x4.1), and Brain - Hippocampus (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of CLK3P2 Gene:

CLK3P2
genes like me logo Genes that share expression patterns with CLK3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLK3P2 Gene

Orthologs for CLK3P2 Gene

Evolution for CLK3P2 Gene

ENSEMBL:
Gene Tree for CLK3P2 (if available)
TreeFam:
Gene Tree for CLK3P2 (if available)

No data available for Orthologs for CLK3P2 Gene

Paralogs for CLK3P2 Gene

No data available for Paralogs for CLK3P2 Gene

Variants for CLK3P2 Gene

Relevant External Links for CLK3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLK3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLK3P2 Gene

Disorders for CLK3P2 Gene

No disorders were found for CLK3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLK3P2 Gene

Publications for CLK3P2 Gene

No publications were found for CLK3P2 Gene.

Products for CLK3P2 Gene

Sources for CLK3P2 Gene

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