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Aliases for CLEC12A-AS1 Gene

Subcategory (RNA class) for CLEC12A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CLEC12A-AS1 Gene

  • CLEC12A Antisense RNA 1 2 3
  • AC091814.3 5

External Ids for CLEC12A-AS1 Gene

Summaries for CLEC12A-AS1 Gene

GeneCards Summary for CLEC12A-AS1 Gene

CLEC12A-AS1 (CLEC12A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLEC12A-AS1 Gene

Genomics for CLEC12A-AS1 Gene

Regulatory Elements for CLEC12A-AS1 Gene

Enhancers for CLEC12A-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G010016 1.2 Ensembl ENCODE dbSUPER 11.7 -64.4 -64396 2.5 JUN MAFG ATF2 EP300 RFX5 ZNF316 JUND GATA2 PBX2 NFE2L1 CLEC12A CLEC12A-AS1 CLEC7A KLRF1 LINC02470 CLEC1B GC12P010023
GH12G009829 0.8 FANTOM5 10.7 +123.3 123283 0.3 ZNF639 RNF2 ZNF621 GFI1B FEZF1 OSR2 ZNF148 PRDM6 BCL11A BCL6B KLRF1 KLRD1 MAGOHB TAS2R10 CLEC12A CLEC12A-AS1 KLRB1 CD69 ENSG00000255882
GH12G010027 0.8 Ensembl ENCODE 10.6 -74.5 -74465 1.2 RNF2 IKZF1 MAX FOS CLEC7A CLEC12A-AS1 CLEC12A TMEM52B LINC02470 LOC728715 LOC102724020 GC12P010023
GH12G010040 0.5 dbSUPER 12.3 -89.5 -89544 4.6 CBX8 CBFB CHD4 ZNF394 EP300 CLEC7A CLEC12A-AS1 CLEC12A TMEM52B GABARAPL1 ENSG00000255958 CLEC1B LINC02470 ENSG00000256626 RN7SKP161
GH12G010033 0.5 dbSUPER 10.2 -80.9 -80900 1.4 CTCF ZNF654 SMC3 EMSY RAD21 CLEC7A CLEC12B TMEM52B CLEC12A CLEC12A-AS1 OLR1 GABARAPL1 ENSG00000255958 CLEC9A LOC100421202
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLEC12A-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CLEC12A-AS1 Gene

Chromosome:
12
Start:
9,948,137 bp from pter
End:
9,953,336 bp from pter
Size:
5,200 bases
Orientation:
Minus strand

Genomic View for CLEC12A-AS1 Gene

Genes around CLEC12A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLEC12A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLEC12A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLEC12A-AS1 Gene

Proteins for CLEC12A-AS1 Gene

Post-translational modifications for CLEC12A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLEC12A-AS1 Gene

Domains & Families for CLEC12A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLEC12A-AS1 Gene

Function for CLEC12A-AS1 Gene

Phenotypes for CLEC12A-AS1 Gene

GenomeRNAi human phenotypes for CLEC12A-AS1:
genes like me logo Genes that share phenotypes with CLEC12A-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLEC12A-AS1 Gene

Localization for CLEC12A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CLEC12A-AS1 Gene

Pathways & Interactions for CLEC12A-AS1 Gene

SuperPathways for CLEC12A-AS1 Gene

No Data Available

Interacting Proteins for CLEC12A-AS1 Gene

Gene Ontology (GO) - Biological Process for CLEC12A-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLEC12A-AS1 Gene

Drugs & Compounds for CLEC12A-AS1 Gene

No Compound Related Data Available

Transcripts for CLEC12A-AS1 Gene

mRNA/cDNA for CLEC12A-AS1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CLEC12A-AS1 Gene

No ASD Table

Relevant External Links for CLEC12A-AS1 Gene

GeneLoc Exon Structure for
CLEC12A-AS1
ECgene alternative splicing isoforms for
CLEC12A-AS1

Expression for CLEC12A-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLEC12A-AS1 Gene

Orthologs for CLEC12A-AS1 Gene

Evolution for CLEC12A-AS1 Gene

ENSEMBL:
Gene Tree for CLEC12A-AS1 (if available)
TreeFam:
Gene Tree for CLEC12A-AS1 (if available)

No data available for Orthologs for CLEC12A-AS1 Gene

Paralogs for CLEC12A-AS1 Gene

No data available for Paralogs for CLEC12A-AS1 Gene

Variants for CLEC12A-AS1 Gene

Sequence variations from dbSNP and Humsavar for CLEC12A-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000069162 -- 9,950,981(+) GTAAA(A/C)CCCCA nc-transcript-variant, upstream-variant-2KB
rs1000121735 -- 9,948,304(+) AAATA(A/G)CAAAT nc-transcript-variant
rs1000849729 -- 9,949,880(+) ATTTA(A/T)ATGTT nc-transcript-variant, upstream-variant-2KB
rs1001031307 -- 9,949,466(+) AGTGC(A/G)TTTCT nc-transcript-variant, upstream-variant-2KB
rs1001128503 -- 9,949,575(+) TTTCC(C/T)TGACC nc-transcript-variant, upstream-variant-2KB

Relevant External Links for CLEC12A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLEC12A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLEC12A-AS1 Gene

Disorders for CLEC12A-AS1 Gene

No disorders were found for CLEC12A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLEC12A-AS1 Gene

Publications for CLEC12A-AS1 Gene

No publications were found for CLEC12A-AS1 Gene.

Products for CLEC12A-AS1 Gene

Sources for CLEC12A-AS1 Gene

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