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Aliases for CLCP1 Gene

Aliases for CLCP1 Gene

  • Charcot-Leyden Crystal Protein Pseudogene 1 2 3 5

External Ids for CLCP1 Gene

Previous GeneCards Identifiers for CLCP1 Gene

  • GC22U990249
  • GC22M016277
  • GC22M017904

Summaries for CLCP1 Gene

GeneCards Summary for CLCP1 Gene

CLCP1 (Charcot-Leyden Crystal Protein Pseudogene 1) is a Pseudogene.

Additional gene information for CLCP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLCP1 Gene

Genomics for CLCP1 Gene

Regulatory Elements for CLCP1 Gene

Enhancers for CLCP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H017436 1 Ensembl ENCODE 0.4 -12.2 -12180 1 CTCF ETV1 ZBTB8A ZNF398 ZIC2 ZNF664 PATZ1 ZNF629 PRDM10 EMSY CECR2 CLCP1 GC22M017518
GH22H017443 0.6 ENCODE 0.4 -19.0 -18997 1 PRDM6 POLR2A ETV1 ZNF175 NR2C1 ELF1 ZBTB40 NR2C2 GABPA CECR2 CLCP1 GC22M017518
GH22H017430 0.6 ENCODE 0.4 -5.9 -5860 0 ZFHX2 GLIS1 CEBPB CEBPG ZNF398 ATF2 EGR2 TRIM28 CECR2 CLCP1 GC22M017518
GH22H017475 1.1 Ensembl ENCODE 0.2 -52.1 -52145 2 HDAC1 PKNOX1 ATF1 ZNF366 KLF7 ATF7 CREM SP3 CEBPB ZEB2 CECR2 CECR3 ADA2 GC22M017518 CLCP1
GH22H017450 0.4 ENCODE 0.3 -26.4 -26442 0 GATA3 CECR2 CLCP1 GC22M017518
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CLCP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CLCP1 Gene

Chromosome:
22
Start:
17,424,244 bp from pter
End:
17,424,851 bp from pter
Size:
608 bases
Orientation:
Minus strand

Genomic View for CLCP1 Gene

Genes around CLCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLCP1 Gene

Proteins for CLCP1 Gene

Post-translational modifications for CLCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLCP1 Gene

Domains & Families for CLCP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLCP1 Gene

Function for CLCP1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CLCP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLCP1 Gene

Localization for CLCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLCP1 Gene

Pathways & Interactions for CLCP1 Gene

SuperPathways for CLCP1 Gene

No Data Available

Interacting Proteins for CLCP1 Gene

Gene Ontology (GO) - Biological Process for CLCP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLCP1 Gene

Drugs & Compounds for CLCP1 Gene

No Compound Related Data Available

Transcripts for CLCP1 Gene

mRNA/cDNA for CLCP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CLCP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CLCP1 Gene

No ASD Table

Relevant External Links for CLCP1 Gene

GeneLoc Exon Structure for
CLCP1
ECgene alternative splicing isoforms for
CLCP1

Expression for CLCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CLCP1 Gene

mRNA differential expression in normal tissues according to GTEx for CLCP1 Gene

This gene is overexpressed in Brain - Cerebellum (x13.1), Brain - Cerebellar Hemisphere (x10.2), Muscle - Skeletal (x4.3), and Liver (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of CLCP1 Gene:

CLCP1
genes like me logo Genes that share expression patterns with CLCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLCP1 Gene

Orthologs for CLCP1 Gene

Evolution for CLCP1 Gene

ENSEMBL:
Gene Tree for CLCP1 (if available)
TreeFam:
Gene Tree for CLCP1 (if available)

No data available for Orthologs for CLCP1 Gene

Paralogs for CLCP1 Gene

No data available for Paralogs for CLCP1 Gene

Variants for CLCP1 Gene

Relevant External Links for CLCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLCP1 Gene

Disorders for CLCP1 Gene

No disorders were found for CLCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLCP1 Gene

Publications for CLCP1 Gene

No publications were found for CLCP1 Gene.

Products for CLCP1 Gene

Sources for CLCP1 Gene

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