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Aliases for CLCP1 Gene

Aliases for CLCP1 Gene

  • Charcot-Leyden Crystal Protein Pseudogene 1 2 3 5

External Ids for CLCP1 Gene

Previous GeneCards Identifiers for CLCP1 Gene

  • GC22U990249
  • GC22M016277
  • GC22M017904

Summaries for CLCP1 Gene

GeneCards Summary for CLCP1 Gene

CLCP1 (Charcot-Leyden Crystal Protein Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLCP1 Gene

Genomics for CLCP1 Gene

Regulatory Elements for CLCP1 Gene

Enhancers for CLCP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F017430 0.8 Ensembl ENCODE 0.4 -5.9 -5860 0.9 ZFHX2 ATF3 SMARCA4 GLIS1 ATF2 EGR2 TRIM28 CECR2 CLCP1 GC22M017518
GH22F017436 1 Ensembl ENCODE 0.4 -12.1 -12094 1.9 HDGF HDAC1 PKNOX1 ZBTB40 ZNF121 SMARCA5 ZBTB2 CEBPB NCOA1 ZEB2 CECR2 CLCP1 GC22M017518
GH22F017443 0.2 ENCODE 0.3 -19.0 -18997 1.5 ETV1 ZNF175 SP2 ELF1 ZBTB40 RAD21 GABPA NR2F2 YY1 ZFHX2 CECR2 CLCP1 GC22M017518
GH22F017450 0.4 ENCODE 0.3 -26.4 -26442 0.9 ELF3 ZNF146 SAP130 ZMYM3 ARID4B CEBPG RAD21 TEAD3 CREM MIXL1 CECR2 CLCP1 GC22M017518
GH22F017470 1.1 Ensembl ENCODE 0.2 -47.3 -47320 2.9 PKNOX1 ZNF362 NFYC SP2 ZIC2 RAD21 THRB YY1 TEAD3 OSR2 CECR2 CECR3 CECR1 CECR6 LINC01664 CLCP1 GC22M017518
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CLCP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CLCP1 Gene

Chromosome:
22
Start:
17,424,244 bp from pter
End:
17,424,851 bp from pter
Size:
608 bases
Orientation:
Minus strand

Genomic View for CLCP1 Gene

Genes around CLCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLCP1 Gene

Proteins for CLCP1 Gene

Post-translational modifications for CLCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLCP1 Gene

Domains & Families for CLCP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLCP1 Gene

Function for CLCP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLCP1 Gene

Localization for CLCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CLCP1 Gene

Pathways & Interactions for CLCP1 Gene

SuperPathways for CLCP1 Gene

No Data Available

Interacting Proteins for CLCP1 Gene

Gene Ontology (GO) - Biological Process for CLCP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLCP1 Gene

Transcripts for CLCP1 Gene

mRNA/cDNA for CLCP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CLCP1 Gene

No ASD Table

Relevant External Links for CLCP1 Gene

GeneLoc Exon Structure for
CLCP1
ECgene alternative splicing isoforms for
CLCP1

Expression for CLCP1 Gene

mRNA expression in normal human tissues for CLCP1 Gene

mRNA differential expression in normal tissues according to GTEx for CLCP1 Gene

This gene is overexpressed in Brain - Cerebellum (x13.1), Brain - Cerebellar Hemisphere (x10.2), Muscle - Skeletal (x4.3), and Liver (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of CLCP1 Gene:

CLCP1
genes like me logo Genes that share expression patterns with CLCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CLCP1 Gene

Orthologs for CLCP1 Gene

Evolution for CLCP1 Gene

ENSEMBL:
Gene Tree for CLCP1 (if available)
TreeFam:
Gene Tree for CLCP1 (if available)

No data available for Orthologs for CLCP1 Gene

Paralogs for CLCP1 Gene

No data available for Paralogs for CLCP1 Gene

Variants for CLCP1 Gene

Relevant External Links for CLCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLCP1 Gene

Disorders for CLCP1 Gene

No disorders were found for CLCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLCP1 Gene

Publications for CLCP1 Gene

No publications were found for CLCP1 Gene.

Products for CLCP1 Gene

Sources for CLCP1 Gene

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