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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CLASP1 Gene

protein-coding   GIFtS: 61
GCID: GC02M122095

cytoplasmic linker associated protein 1

 Explore 1 disease affiliated with
CLASP1 via our new
 Human Malady Compendium 
Biological research products
for CLASP1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cytoplasmic Linker Associated Protein 11 2     Protein Orbit Homolog 12 3
MAST11 2 3     CLIP-Associating Protein 12
KIAA06221 3 5     Multiple Asters 12
Cytoplasmic Linker-Associated Protein 12 3     HOrbit11
Multiple Asters Homolog 12 3     

External Ids:    HGNC: 170881   Entrez Gene: 233322   Ensembl: ENSG000000740547   OMIM: 6058525   UniProtKB: Q7Z4603   

Export aliases for CLASP1 gene to outside databases

Previous GC identifers: GC02M119300 GC02M120015 GC02M122002 GC02M122190 GC02M121811 GC02M114418


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CLASP1:
CLASPs, such as CLASP1, are nonmotor microtubule-associated proteins that interact with CLIPs (e.g., CLIP170; MIM
179838). CLASP1 is involved in the regulation of microtubule dynamics at the kinetochore and throughout the spindle
(Maiato et al., 2003 (PubMed 12837247)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: CLAP1_HUMAN, Q7Z460
Function: Microtubule plus-end tracking protein that promotes the stabilization of dynamic microtubules. Involved in
the nucleation of noncentrosomal microtubules originating from the trans-Golgi network (TGN). Required for the
polarization of the cytoplasmic microtubule arrays in migrating cells towards the leading edge of the cell. May act at
the cell cortex to enhance the frequency of rescue of depolymerizing microtubules by attaching their plus-ends to
cortical platforms composed of ERC1 and PHLDB2. This cortical microtubule stabilizing activity is regulated at least
in part by phosphatidylinositol 3-kinase signaling. Also performs a similar stabilizing function at the kinetochore
which is essential for the bipolar alignment of chromosomes on the mitotic spindle

Gene Wiki entry for CLASP1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022135.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CLASP1 gene promoter:
         POU2F2 (Oct-2.1)   Oct-B1   oct-B3   oct-B2   POU2F2   POU2F2C   POU2F1   POU2F1a   aMEF-2   POU2F2B   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 4): CLASP1 promoter sequence
   Search SABiosciences Chromatin IP Primers for CLASP1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CLASP1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q14.2-q14.3   Ensembl cytogenetic band:  2q14.3   HGNC cytogenetic band: 2q14.2-q14.3

CLASP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CLASP1 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M122095:  view genomic region     (about GC identifiers)

Start:
122,095,352 bp from pter      End:
122,407,163 bp from pter
Size:
311,812 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CLAP1_HUMAN, Q7Z460 (See protein sequence)
Recommended Name: CLIP-associating protein 1  
Size: 1538 amino acids; 169451 Da
Subunit: Interacts with CLIP2, ERC1, MAPRE1, MAPRE3, microtubules, PHLDB2 and RSN. The interaction with ERC1 may be
mediated by PHLDB2. Interacts with GCC2; recruits CLASP1 to Golgi membranes. Interacts with MACF1 (By similarity)
Subcellular location: Cytoplasm, cytoskeleton. Cytoplasm, cytoskeleton, centrosome. Chromosome, centromere,
kinetochore. Cytoplasm, cytoskeleton, spindle. Golgi apparatus, trans-Golgi network (Probable). Note=Localizes to
microtubule plus ends. Localizes to centrosomes, kinetochores and the mitotic spindle from prometaphase. Subsequently
localizes to the spindle midzone from anaphase and to the midbody from telophase. In migrating cells localizes to the
plus ends of microtubules within the cell body and to the entire microtubule lattice within the lamella. Localizes to
the cell cortex and this requires ERC1 and PHLDB2
Sequence caution: Sequence=AAH32563.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=AAX88872.1; Type=Erroneous gene model prediction;
Secondary accessions: O75118 Q2KHQ9 Q5H9P0 Q8N5B8 Q9BQT5
Alternative splicing: 3 isoforms:  Q7Z460-1   Q7Z460-2   Q7Z460-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for CLASP1: NX_Q7Z460

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7Z460

  • CLASP1 Protein expression data from MOPED and PaxDb:    About this image 
    CLASP1 Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_001135745.1  NP_001135746.1  NP_001193980.1  NP_056097.1  

    ENSEMBL proteins: 
     ENSP00000386442   ENSP00000400562   ENSP00000447929   ENSP00000392886   ENSP00000402101  
     ENSP00000263710   ENSP00000389372   ENSP00000380717   ENSP00000441625   ENSP00000438620  
     ENSP00000441770  
    Reactome Protein details: Q7Z460
    Human Recombinant Protein Products for CLASP1: 
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    Uscn Proteins for CLASP1

    Gene Ontology (GO): 5/11 cellular component terms (GO ID links to tree view) (see all 11):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000776kinetochore IDA12837247
    GO:0000777condensed chromosome kinetochore IEA--
    GO:0005794Golgi apparatus IDA15631994
    GO:0005813centrosome IDA--
    GO:0005828kinetochore microtubule TAS12837247

    CLASP1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CLASP1 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR011989 ARM-like
     IPR021133 HEAT_type_2
     IPR000357 HEAT
     IPR024395 CLASP_N_dom
     IPR016024 ARM-type_fold

    Graphical View of Domain Structure for InterPro Entry Q7Z460

    ProtoNet protein and cluster: Q7Z460

    1 Blocks protein family: IPB000357 HEAT repeat

    UniProtKB/Swiss-Prot: CLAP1_HUMAN, Q7Z460
    Similarity: Belongs to the CLASP family
    Similarity: Contains 7 HEAT repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: CLAP1_HUMAN, Q7Z460
    Function: Microtubule plus-end tracking protein that promotes the stabilization of dynamic microtubules. Involved in
    the nucleation of noncentrosomal microtubules originating from the trans-Golgi network (TGN). Required for the
    polarization of the cytoplasmic microtubule arrays in migrating cells towards the leading edge of the cell. May act at
    the cell cortex to enhance the frequency of rescue of depolymerizing microtubules by attaching their plus-ends to
    cortical platforms composed of ERC1 and PHLDB2. This cortical microtubule stabilizing activity is regulated at least
    in part by phosphatidylinositol 3-kinase signaling. Also performs a similar stabilizing function at the kinetochore
    which is essential for the bipolar alignment of chromosomes on the mitotic spindle

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI11290329
    GO:0008017microtubule binding IMP12837247
    GO:0043515kinetochore binding IMP12837247
    GO:0051010microtubule plus-end binding IDA12837247
         
    CLASP1 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for CLASP1:
     Decreased POU5F1-GFP protein e 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CLASP1 

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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Recruitment of mitotic centrosome proteins and complexes
    Centrosome maturation1.00
    Mitotic G2-G2/M phases0.81
    Recruitment of mitotic centrosome proteins and complexes1.00
    Loss of proteins required for interphase microtubule organization from the centrosome0.78
    G2/M Transition0.83
    Loss of Nlp from mitotic centrosomes0.78
    2M Phase
    M Phase1.00
    Mitotic Anaphase0.85
    Mitotic M-M/G1 phases0.88
    Separation of Sister Chromatids0.80
    Mitotic Metaphase and Anaphase0.85
    3Resolution of Sister Chromatid Cohesion
    Resolution of Sister Chromatid Cohesion1.00
    Mitotic Prometaphase0.93
    Kinetochore assembly0.96
    4Cell Cycle
    Cell Cycle1.00
    Cell Cycle, Mitotic0.84
    5Axon guidance
    Axon guidance1.00
    Developmental Biology0.69

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for CLASP1
        Signaling by Slit

    5/20        Reactome Pathways for CLASP1 (see all 20)
        Developmental Biology
    Mitotic Prometaphase
    Resolution of Sister Chromatid Cohesion
    Cell Cycle
    M Phase



    CLASP1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CLASP1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/673 Interacting proteins for CLASP1 (Q7Z4601, 2, 3 ENSP000002637104) via UniProtKB, MINT, STRING, and/or I2D (see all 673)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    KIF1BO603332, 3, ENSP000002639344MINT-8080001 MINT-8080014 MINT-8080046 I2D: score=1 STRING: ENSP00000263934
    SPAG5Q96R062, 3, ENSP000003233004MINT-8080001 MINT-8080014 MINT-8080057 I2D: score=1 STRING: ENSP00000323300
    PHLDB2Q86SQ02, 3, ENSP000003775024MINT-8080087 I2D: score=1 STRING: ENSP00000377502
    TLN1Q9Y4902, 3MINT-7947479 I2D: score=1 
    YWHAGP619812, 3, ENSP000003063304MINT-50883 I2D: score=4 STRING: ENSP00000306330
    About this table

    Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000086G2/M transition of mitotic cell cycle TAS--
    GO:0000087M phase of mitotic cell cycle TAS--
    GO:0000226microtubule cytoskeleton organization IGI15631994
    GO:0000236mitotic prometaphase TAS--
    GO:0000278mitotic cell cycle TAS--

    CLASP1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CLASP1
    Search CenterWatch for drugs/clinical trials and news about CLASP1 / CLAP1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CLASP1 gene (4 alternative transcripts): 
    NM_001142273.1  NM_001142274.1  NM_001207051.1  NM_015282.2  

    Unigene Cluster for CLASP1:

    Cytoplasmic linker associated protein 1
    Hs.469840  [show with all ESTs]
    Unigene Representative Sequence: NM_015282
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000409078 ENST00000462767 ENST00000452274 ENST00000472776(uc002tnf.3)
    ENST00000463621 ENST00000430234 ENST00000491646 ENST00000418989 ENST00000449975
    ENST00000474065 ENST00000480007 ENST00000485112 ENST00000263710(uc002tmz.3 uc002tnc.3)
    ENST00000455322(uc002tnb.3 uc010yyx.2) ENST00000397587(uc002tna.3 uc010yyw.2 uc010yyy.2 uc010yyz.2 uc010yza.2 uc010yzc.2)
    ENST00000541377(uc021vnl.1 uc002tng.1) ENST00000545861 ENST00000541859(uc002tmy.3 uc010yyv.2)


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    hsa-miR-411* hsa-miR-15a hsa-miR-219-5p hsa-miR-3921 hsa-miR-3161 hsa-miR-3142 hsa-miR-3613-3p hsa-miR-200b
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    Additional cDNA sequence: 

    AB014522.1 AF347693.1 AJ288057.1 AK074338.1 AK091140.1 AK294922.1 AK297259.1 AK297420.1 
    AK299331.1 AK301814.1 AK302393.1 AY425956.1 BC032563.1 BC112940.1 BC132723.1 BC144107.1 
    BX648933.1 CR749627.1 CR933722.1 

    19 DOTS entries:

    DT.91753193  DT.313630  DT.91729832  DT.100782482  DT.97770637  DT.100782479  DT.121019861  DT.40270276 
    DT.91916396  DT.75115327  DT.75179731  DT.40110470  DT.40313950  DT.97806905  DT.97818536  DT.100662494 
    DT.101983108  DT.91725508  DT.91909535 

    24/141 AceView cDNA sequences (see all 141):

    T08988 AK091140 CD359902 CK431253 BM669634 AW408170 BM927973 AY425956 
    BM453810 AW469431 BM987627 NM_015282 AJ288057 CB117700 BX648523 AL698857 
    BE328429 BM551776 AX746802 BG035267 AL134783 BM466456 AK123216 CR619630 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for CLASP1 (see all 6)    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^
    SP1:                                                                                -                                               -                           
    SP2:                                                                                -                                                           -           -   
    SP3:                                                                                                                                -           -           -   
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32a · 32b ^ 33 ^ 34 ^ 35 ^ 36 ^ 37 ^ 38 ^ 39 ^ 40 ^ 41a · 41b
    SP1:        -                                   -                                                                     
    SP2:        -                                                                                                         
    SP3:                                            -                 -                                                   
    SP4:                                            -                                                                     
    SP5:                                                              -                                                   


    ECgene alternative splicing isoforms for CLASP1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CLASP1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCAAATGTAC
    CLASP1 Expression
    About this image
    See CLASP1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CLASP1

    SOURCE GeneReport for Unigene cluster: Hs.469840
        SABiosciences Expression via Pathway-Focused PCR Array including CLASP1: 

              Cytoskeleton Regulators in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CLASP1 gene from 8/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CLASP11 cytoplasmic linker associated protein 1 82.79(n)
    94.94(a)
      429042  XM_426599.3  XP_426599.2 
    lizard
    (Anolis carolinensis)
    Reptilia CLASP16
    --
    91(a)
    1 ↔ 1
    1(84025109-84219880)
    African clawed frog
    (Xenopus laevis)
    Amphibia BJ069088.12   -- 78.81(n)    BJ069088.1 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC5620771 cytoplasmic linker associated protein-like 73.1(n)
    82.71(a)
      562077  NM_001115139.1  NP_001108611.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta chb1 , 3 mitosis GTP binding3
    chromosome bows1
    38(a)3
    44.81(n)1
    35.37(a)1
      3 78C23
    439011  NM_168883.11  NP_730597.11 
    worm
    (Caenorhabditis elegans)
    Secernentea cls-31 Protein CLS-3 42.52(n)
    31.69(a)
      176298  NM_066633.3  NP_499034.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons CLASP1 CLIP-associated protein 39.76(n)
    25.13(a)
      816539  NM_179666.4  NP_849997.2 
    rice
    (Oryza sativa)
    Liliopsida Os04g05075001 hypothetical protein 40.19(n)
    27.55(a)
      4336347  NM_001059798.2  NP_001053263.2 


    ENSEMBL Gene Tree for CLASP1 (if available)
    TreeFam Gene Tree for CLASP1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CLASP1 gene
    CLASP22  
    3 SIMAP similar genes for CLASP1 using alignment to 12 protein entries:     CLAP1_HUMAN (see all proteins):
    DKFZp686D1968    DKFZp686D11262    CLASP2

    CLASP1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/4772 NCBI SNPs in CLASP1 are shown (see all 4772    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs803422501,2
    --114609922(+) GACAGA/GGCCCA 1 -- us2k10--------
    rs1155347841,2
    C,F--114611192(+) TGTACA/GGCTAT 1 -- us2k11Minor allele frequency- G:0.05WA 118
    rs745168961,2
    --114611556(+) TTCTAT/CTATAA 1 -- us2k11Minor allele frequency- C:0.01WA 118
    rs1117418351,2
    C--114611559(+) TATTAC/TAACCA 1 -- us2k11Minor allele frequency- T:0.50WA 2
    rs775160081,2
    --114611600(+) TGAGCA/GCATAG 1 -- nc-transcript-variant0--------
    rs1811954491,2
    C--114611609(+) AGTGAA/C/GGGCAG 2 -- nc-transcript-variant0--------
    rs729693881,2
    C--114611616(+) GCAGTG/ACTGCT 1 -- nc-transcript-variant1Minor allele frequency- A:0.50WA 2
    rs739509851,2
    C--114611696(+) AAAACG/CTGTTT 1 -- ds50011Minor allele frequency- C:0.50WA 2
    rs739509861,2
    C--114611697(+) AAACCC/TGTTTT 1 -- ds50011Minor allele frequency- T:0.50WA 2
    rs1113579581,2
    --114611723(+) TCAAAC/TAGCAG 1 -- ds50011Minor allele frequency- T:0.50CSA 2

    HapMap Linkage Disequilibrium report for CLASP1 (122095352 - 122345352 bp, first 250kb of CLASP1)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for CLASP1
         2 CNVs: 3389 74236

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CLASP1 for disorders           About GeneDecksing

    OMIM gene information: 605852    OMIM disorders: --

    1 disease for CLASP1:    About MalaCards
    breast cancer

    Human Genome Epidemiology (HuGE) Navigator: CLASP1 (4 documents)

    Export disorders for CLASP1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CLASP1 gene, integrated from 9 sources (see all 51):
    (articles sorted by number of sources associating them with CLASP1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Mammalian CLASP1 and CLASP2 cooperate to ensure mitotic fidelity by regulating spindle and kinetochore function. (PubMed id 16914514)1, 2, 3 Pereira A.L.... Maiato H. (2006)
    2. Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9734811)1, 2, 3 Ishikawa K.... Ohara O. (1998)
    3. Asymmetric CLASP-dependent nucleation of noncentrosom al microtubules at the trans-Golgi network. (PubMed id 17543864)1, 2 Efimov A....Kaverina I. (2007)
    4. Mammalian CLASPs are required for mitotic spindle organization and kinetochore alignment. (PubMed id 16866869)1, 2 Mimori-Kiyosue Y.... Vorobjev I. (2006)
    5. CLASPs attach microtubule plus ends to the cell cortex through a complex with LL5beta. (PubMed id 16824950)1, 2 Lansbergen G....Akhmanova A. (2006)
    6. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)1, 2 Hillier L.W....Wilson R.K. (2005)
    7. Microtubule bundle formation and cell death induced by the human CLASP/Orbit N-terminal fragment. (PubMed id 16145243)1, 2 Aonuma M....Matsukage A. (2005)
    8. CLASP1 and CLASP2 bind to EB1 and regulate microtubule plus-end dynamics at the cell cortex. (PubMed id 15631994)1, 2 Mimori-Kiyosue Y....Akhmanova A. (2005)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. Human CLASP1 is an outer kinetochore component that regulates spindle microtubule dynamics. (PubMed id 12837247)1, 2 Maiato H....Earnshaw W.C. (2003)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23332 HGNC: 17088 AceView: CLASP1 Ensembl:ENSG00000074054 euGenes: HUgn23332
    ECgene: CLASP1 H-InvDB: CLASP1

    (According to HUGE)
    About This Section
    HUGE: KIAA0622

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CLASP1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CLASP1 gene:
    Search GeneIP for patents involving CLASP1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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