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Aliases for CKS1BP3 Gene

Aliases for CKS1BP3 Gene

  • CDC28 Protein Kinase Regulatory Subunit 1B Pseudogene 3 2 3 5

External Ids for CKS1BP3 Gene

Previous GeneCards Identifiers for CKS1BP3 Gene

  • GC05M061824
  • GC05M061843
  • GC05M061807

Summaries for CKS1BP3 Gene

GeneCards Summary for CKS1BP3 Gene

CKS1BP3 (CDC28 Protein Kinase Regulatory Subunit 1B Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CKS1BP3 Gene

Genomics for CKS1BP3 Gene

Regulatory Elements for CKS1BP3 Gene

Enhancers for CKS1BP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F062538 0.9 Ensembl ENCODE 0.3 -26.1 -26092 0.9 PKNOX1 ATF1 ARNT TBL1XR1 CHAMP1 GATA2 FOS CREM NCOA1 CEBPB ENSG00000241991 CKS1BP3
GH05F062548 0.6 FANTOM5 Ensembl 0.3 -36.1 -36058 0.9 PRDM1 ENSG00000241991 CKS1BP3
GH05F062474 0.6 ENCODE 0.3 +37.2 37229 1.1 SMARCE1 ARID1B ZNF362 JUND NCOR1 TAL1 CEBPB FOS IPO11 RNU6-661P CKS1BP3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CKS1BP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for CKS1BP3 Gene

Chromosome:
5
Start:
62,511,761 bp from pter
End:
62,512,482 bp from pter
Size:
722 bases
Orientation:
Minus strand

Genomic View for CKS1BP3 Gene

Genes around CKS1BP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CKS1BP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CKS1BP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CKS1BP3 Gene

Proteins for CKS1BP3 Gene

Post-translational modifications for CKS1BP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CKS1BP3 Gene

Domains & Families for CKS1BP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CKS1BP3 Gene

Function for CKS1BP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CKS1BP3 Gene

Localization for CKS1BP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CKS1BP3 Gene

Pathways & Interactions for CKS1BP3 Gene

SuperPathways for CKS1BP3 Gene

No Data Available

Interacting Proteins for CKS1BP3 Gene

Gene Ontology (GO) - Biological Process for CKS1BP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CKS1BP3 Gene

Transcripts for CKS1BP3 Gene

mRNA/cDNA for CKS1BP3 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CKS1BP3 Gene

No ASD Table

Relevant External Links for CKS1BP3 Gene

GeneLoc Exon Structure for
CKS1BP3
ECgene alternative splicing isoforms for
CKS1BP3

Expression for CKS1BP3 Gene

mRNA expression in normal human tissues for CKS1BP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of CKS1BP3 Gene:

CKS1BP3
genes like me logo Genes that share expression patterns with CKS1BP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CKS1BP3 Gene

Orthologs for CKS1BP3 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CKS1BP3 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia CKS1B 35
  • 100 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia CKS1B 35
  • 100 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 95 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm6531 35
  • 77 (a)
ManyToMany
chicken
(Gallus gallus)
Aves CKS1B 35
  • 97 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 95 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii cks1b 35
  • 87 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta Cks85A 35
  • 54 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea Y71G12B.27 35
  • 37 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CKS1 35
  • 26 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 43 (a)
OneToMany
Species where no ortholog for CKS1BP3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for CKS1BP3 Gene

ENSEMBL:
Gene Tree for CKS1BP3 (if available)
TreeFam:
Gene Tree for CKS1BP3 (if available)

Paralogs for CKS1BP3 Gene

No data available for Paralogs for CKS1BP3 Gene

Variants for CKS1BP3 Gene

Relevant External Links for CKS1BP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CKS1BP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CKS1BP3 Gene

Disorders for CKS1BP3 Gene

No disorders were found for CKS1BP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CKS1BP3 Gene

Publications for CKS1BP3 Gene

No publications were found for CKS1BP3 Gene.

Products for CKS1BP3 Gene

Sources for CKS1BP3 Gene

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