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Aliases for CKMT2-AS1 Gene

Subcategory (RNA class) for CKMT2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CKMT2-AS1 Gene

  • CKMT2 Antisense RNA 1 2 3 5
  • CTC-281B15.1 3

External Ids for CKMT2-AS1 Gene

Previous GeneCards Identifiers for CKMT2-AS1 Gene

  • GC05M080501

Summaries for CKMT2-AS1 Gene

GeneCards Summary for CKMT2-AS1 Gene

CKMT2-AS1 (CKMT2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CKMT2-AS1 Gene

Genomics for CKMT2-AS1 Gene

Regulatory Elements for CKMT2-AS1 Gene

Enhancers for CKMT2-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CKMT2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CKMT2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CKMT2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CKMT2-AS1 Gene

81,204,084 bp from pter
81,301,569 bp from pter
97,486 bases
Minus strand

Genomic View for CKMT2-AS1 Gene

Genes around CKMT2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CKMT2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CKMT2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CKMT2-AS1 Gene

Proteins for CKMT2-AS1 Gene

Post-translational modifications for CKMT2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CKMT2-AS1 Gene

Domains & Families for CKMT2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CKMT2-AS1 Gene

Function for CKMT2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CKMT2-AS1 Gene

Localization for CKMT2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CKMT2-AS1 Gene

Pathways & Interactions for CKMT2-AS1 Gene

SuperPathways for CKMT2-AS1 Gene

No Data Available

Interacting Proteins for CKMT2-AS1 Gene

Gene Ontology (GO) - Biological Process for CKMT2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CKMT2-AS1 Gene

Drugs & Compounds for CKMT2-AS1 Gene

No Compound Related Data Available

Transcripts for CKMT2-AS1 Gene

mRNA/cDNA for CKMT2-AS1 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CKMT2-AS1 Gene

No ASD Table

Relevant External Links for CKMT2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CKMT2-AS1 Gene

mRNA expression in normal human tissues for CKMT2-AS1 Gene

genes like me logo Genes that share expression patterns with CKMT2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CKMT2-AS1 Gene

Orthologs for CKMT2-AS1 Gene

Evolution for CKMT2-AS1 Gene

Gene Tree for CKMT2-AS1 (if available)
Gene Tree for CKMT2-AS1 (if available)

No data available for Orthologs for CKMT2-AS1 Gene

Paralogs for CKMT2-AS1 Gene

No data available for Paralogs for CKMT2-AS1 Gene

Variants for CKMT2-AS1 Gene

Sequence variations from dbSNP and Humsavar for CKMT2-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs6862776 -- 81,296,637(+) ttttg(G/T)atttt intron-variant
rs12653169 -- 81,290,674(+) aataa(C/G)aaccc intron-variant
rs12653916 -- 81,284,597(+) AAAGC(C/T)AACTA intron-variant
rs12654520 -- 81,273,122(+) actgt(C/G)ggagg intron-variant
rs4703829 -- 81,278,863(+) tcagt(G/T)tgctg intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for CKMT2-AS1 Gene

Disorders for CKMT2-AS1 Gene

Relevant External Links for CKMT2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CKMT2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CKMT2-AS1 Gene

Publications for CKMT2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for CKMT2-AS1 Gene

Sources for CKMT2-AS1 Gene