CKM Gene
protein-coding GIFtS : 68
GCID: GC19 M045809
creatine kinase, muscle (Previous symbol: CKMM )
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Aliasesfor CKM gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Creatine Kinase, Muscle 1 2 EC 2.7.3.23 8 CKMM1 2 3 5 Creatine Kinase M-Type2 Creatine Kinase M Chain2 3 EC 2.7.38 M-CK2 3
Export aliases for CKM gene to outside databases Previous GC identifers: GC19M046454 GC19M046200 GC19M050485 GC19M050501 GC19M042241
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Summariesfor CKM gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for CKM : The protein encoded by this gene is a cytoplasmic enzyme involved in energy homeostasis and is an important serum marker for myocardial infarction. The encoded protein reversibly catalyzes the transfer of phosphate between ATP and various phosphogens such as creatine phosphate. It acts as a homodimer in striated muscle as well as in other tissues, and as a heterodimer with a similar brain isozyme in heart. The encoded protein is a member of the ATP:guanido phosphotransferase protein family. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: KCRM_HUMAN, P06732 Function : Reversibly catalyzes the transfer of phosphate between ATP and various phosphogens (e.g. creatine phosphate).Creatine kinase isoenzymes play a central role in energy transduction in tissues with large, fluctuating energy demands, such as skeletal muscle, heart, brain and spermatozoa Gene Wiki entry for CKM
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Genomic Viewsfor CKM gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000019.9 NC_018930.1 NT_011109.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CKM gene promoter: USF1 USF-1 MyoD Pax-4a Arnt Roaz Other transcription factors Search SABiosciences Chromatin IP Primers for CKM Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CKM
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 19q13.32 Ensembl cytogenetic band: 19q13.32 HGNC cytogenetic band: 19q13.32 CKM Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19M045809: view genomic region
(about GC identifiers )
Start:
45,809,671 bp from pter
End:
45,826,235 bp from pter
Size:
16,565 bases
Orientation:
minus strand
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Proteinsfor CKM gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: KCRM_HUMAN, P06732 (See
protein sequence )Recommended Name: Creatine kinase M-type Size : 381 amino acids; 43101 Da
Subunit : Dimer of identical or non-identical chains. With MM being the major form in skeletal muscle and myocardium, MBexisting in myocardium, and BB existing in many tissues, especially brain
Subcellular location : Cytoplasm
1 PDB 3D structure from and Proteopedia for CKM :1I0E (3D)
 
Secondary accessions : Q96QL9Explore the universe of human proteins at neXtProt for CKM: NX_P06732 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P06732 4/26 DME Specific Peptides for CKM (P06732 ) (see all 26 )CKM Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_001815.2 ENSEMBL proteins: ENSP00000221476 Reactome Protein details: P06732 Human Recombinant Protein Products for CKM: Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view) : About this table
CKM for ontologies About GeneDecksing CKM Antibody Products: Assay Products for CKM:
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Protein
Domains / Familiesfor CKM gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CKM for domains About GeneDecksing 5 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P06732 ProtoNet protein and cluster: P06732
1 Blocks protein family : IPB000749 ATP:guanido phosphotransferase UniProtKB/Swiss-Prot: KCRM_HUMAN, P06732 Similarity : Belongs to the ATP:guanido phosphotransferase familySimilarity : Contains 1 phosphagen kinase C-terminal domainSimilarity : Contains 1 phosphagen kinase N-terminal domain
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Functionfor CKM gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: KCRM_HUMAN, P06732 Function : Reversibly catalyzes the transfer of phosphate between ATP and various phosphogens (e.g. creatine phosphate).Creatine kinase isoenzymes play a central role in energy transduction in tissues with large, fluctuating energy demands, such as skeletal muscle, heart, brain and spermatozoa Catalytic activity : ATP + creatine = ADP + phosphocreatine
Genatlas biochemistry entry for CKM : creatine kinase,muscle Enzyme Numbers (IUBMB): EC 2.7.3.2 1 2 EC 2.7.3 2 Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004111 creatine kinase activity
IEA -- GO:0005524 ATP binding
IEA --
CKM for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for CKM : 5 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Ckm) :
CKM for phenotypes About GeneDecksing Animal Models: Mouse knock-outs for CKM: Ckm tm1Bew Ckm tm2Bew Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CKM (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CKM (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CKM (NM_001824 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CKM Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CKM
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CKM
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Pathways & Interactionsfor CKM gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/6 super-pathways (see all 6 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Metabolism 2 Arginine and proline metabolism 3 creatine-phosphate biosynthesis 4 Metabolism of amino acids and derivatives 5 AMPK Enzyme Complex Pathway
Pathway sources See GeneCards unified pathways Show all pathways 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for CKM 3 BioSystems Pathways for CKM 3
Reactome Pathways for CKM 2
Kegg Pathways (Kegg details for CKM) :
CKM for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CKM STRING Interaction
Network Preview (showing 5 interactants - click image to see 13)5/18 Interacting proteins for CKM (P06732 3 ENSP00000221476 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 18 )About this table Gene Ontology (GO): 4 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006600 creatine metabolic process
TAS -- GO:0034641 cellular nitrogen compound metabolic process
TAS -- GO:0044281 small molecule metabolic process
TAS -- GO:0046314 phosphocreatine biosynthetic process
IEA --
CKM for ontologies About GeneDecksing
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Drugs & Compoundsfor CKM gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CKM for compounds About GeneDecksing Browse Tocris compounds for CKM 4 HMDB Compounds for CKM About this table 4 DrugBank Compounds for CKM About this table 10/23 Novoseek chemical compound relationships for CKM gene (see all 23 ) About this table
Search CenterWatch for drugs/clinical trials and news about CKM / KCRM
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Transcriptsfor CKM gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CKM gene: NM_001824.4 Unigene Cluster for CKM:
Creatine kinase, muscle Hs.334347 [show with all ESTs ] Unigene Representative Sequence: NM_001824 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000221476 (uc002pbd.3 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CKM (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CKM (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CKM (NM_001824 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CKM Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CKM
Additional cDNA sequence: AK129878.1 AK300730.1 AK313281.1 BC007462.1 BT006793.1 M14780.1 M16440.1
16 DOTS entries : DT.86999432 DT.91755914
DT.100820874 DT.121502341 DT.102828559 DT.100820873 DT.121502345 DT.100820875 DT.121502338 DT.91755923 DT.100820876 DT.100820872 DT.100820877 DT.87000155 DT.95369564 DT.100031850 24/987 AceView cDNA sequences (see all 987 ):
F29227 F29176 CD612932 BM874705 F31964 NM_001824 F28206 F30006 F22796 F33674 F29199 F15639 F24524 F21295 AJ573003 F36280 AA346181 F35273 AL598094 C05040 F30805 F30046 F30182 F18252 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for CKM About this scheme ExUns: 1 ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8a · 8b SP1 :                               SP2 :         -   -   -   -   -   -   -           SP3 :           -   -                   SP4 :     -                          
ECgene alternative splicing isoforms for CKM
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Expression for CKM gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CKM expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ATCCCCGCCCAbout this image CKM expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Adipose Interscapular Brown Adipose Depot Adipose Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See CKM Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CKM SOURCE GeneReport for Unigene cluster: Hs.334347 SABiosciences Expression via Pathway-Focused PCR Array including CKM : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CKMBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CKM QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CKM QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CKM In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CKM
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Orthologsfor CKM gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for CKM gene from 6/21 species (see all 21 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
CKM1
creatine kinase, muscle
81.45(n) 90.29(a)
 
396507 NM_205507.1 NP_990838.1
lizard (Anolis carolinensis)
Reptilia
CKM6
--
93(a)
1 ↔ 1
GL344965.1(1197-12094)
African clawed frog (Xenopus laevis)
Amphibia
ckm-prov2
creatine kinase, muscle
80.36(n)
 
BC042249.1
zebrafish (Danio rerio)
Actinopterygii
ckm2
creatine kinase, muscle
82.81(n)
 
30095 BC056706.1
fruit fly (Drosophila melanogaster)
Insecta
Argk3
phosphorylation arginine kinase
39(a) (best of 3)
 
--
worm (Caenorhabditis elegans)
Secernentea
ZC434.83
arginine kinase
39(a) (best of 4)
 
I(10356154-10357374) --
ENSEMBL Gene Tree for CKM (if available)TreeFam Gene Tree for CKM (if available)
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Paralogsfor CKM gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CKM gene CKB 2 CKMT1B 2 CKMT2 2 CKMT1A 2 4 SIMAP similar genes for CKM using alignment to 1 protein entry: KCRM_HUMAN :CKB CKMT2 CKMT1B CKMT1A
CKM for paralogs About GeneDecksing
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Genomic Variantsfor CKM gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 19 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More