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Aliases for CIR1P1 Gene

Subcategory (RNA class) for CIR1P1 Gene

lncRNA

Aliases for CIR1P1 Gene

  • Corepressor Interacting With RBPJ, 1 Pseudogene 1 2 3 5

External Ids for CIR1P1 Gene

ORGUL Members for CIR1P1 Gene

Previous GeneCards Identifiers for CIR1P1 Gene

  • GC05M153938

Summaries for CIR1P1 Gene

GeneCards Summary for CIR1P1 Gene

CIR1P1 (Corepressor Interacting With RBPJ, 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CIR1P1 Gene

Genomics for CIR1P1 Gene

Regulatory Elements for CIR1P1 Gene

Enhancers for CIR1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F154583 1.3 FANTOM5 ENCODE 0.3 -24.1 -24125 2.0 TBP KLF17 ZNF2 RAD21 ZNF366 ELK1 RCOR1 FOS DEK ZNF263 HAND1 MRPL22 SAP30L MIR3141 CIR1P1
GH05F154522 1.3 FANTOM5 Ensembl ENCODE 0.3 +36.4 36368 2.8 BCOR GTF2F1 MAX ZMYM3 ZIC2 RAD21 ZBTB48 PATZ1 ZNF600 STAT1 HAND1 LOC100271907 CIR1P1
GH05F154520 1.1 Ensembl ENCODE 0.3 +39.1 39114 1.7 GTF2F1 CTCF TEAD4 KLF17 YBX1 EBF1 RAD21 ZFHX2 CTBP1 PATZ1 HAND1 LOC100271907 CIR1P1
GH05F154502 1.1 Ensembl ENCODE 0.2 +57.2 57178 1.1 HDGF TBL1XR1 CHD4 MAX BMI1 EBF1 RELA CBX5 NFYB EED HAND1 SAP30L LOC100271907 CIR1P1
GH05F154575 0.7 ENCODE 0.3 -16.3 -16322 2.5 TBP CTCF PKNOX1 ZIC2 RAD21 RFX5 ZNF664 CTBP1 SMC3 TCF7L2 MIR3141 CIR1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CIR1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CIR1P1 Gene

Chromosome:
5
Start:
154,559,308 bp from pter
End:
154,560,518 bp from pter
Size:
1,211 bases
Orientation:
Minus strand

Genomic View for CIR1P1 Gene

Genes around CIR1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CIR1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CIR1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CIR1P1 Gene

Proteins for CIR1P1 Gene

Post-translational modifications for CIR1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CIR1P1 Gene

Domains & Families for CIR1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CIR1P1 Gene

Function for CIR1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CIR1P1 Gene

Localization for CIR1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CIR1P1 Gene

Pathways & Interactions for CIR1P1 Gene

SuperPathways for CIR1P1 Gene

No Data Available

Interacting Proteins for CIR1P1 Gene

Gene Ontology (GO) - Biological Process for CIR1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CIR1P1 Gene

Transcripts for CIR1P1 Gene

mRNA/cDNA for CIR1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CIR1P1 Gene

No ASD Table

Relevant External Links for CIR1P1 Gene

GeneLoc Exon Structure for
CIR1P1
ECgene alternative splicing isoforms for
CIR1P1

Expression for CIR1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CIR1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CIR1P1 Gene:

CIR1P1
genes like me logo Genes that share expression patterns with CIR1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CIR1P1 Gene

Orthologs for CIR1P1 Gene

Evolution for CIR1P1 Gene

ENSEMBL:
Gene Tree for CIR1P1 (if available)
TreeFam:
Gene Tree for CIR1P1 (if available)

No data available for Orthologs for CIR1P1 Gene

Paralogs for CIR1P1 Gene

No data available for Paralogs for CIR1P1 Gene

Variants for CIR1P1 Gene

Relevant External Links for CIR1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CIR1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CIR1P1 Gene

Disorders for CIR1P1 Gene

No disorders were found for CIR1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CIR1P1 Gene

Publications for CIR1P1 Gene

No publications were found for CIR1P1 Gene.

Products for CIR1P1 Gene

Sources for CIR1P1 Gene

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