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Aliases for CIDECP Gene

Aliases for CIDECP Gene

  • Cell Death-Inducing DFFA-Like Effector C Pseudogene 2 3 5
  • Cell Death-Inducing CIDE-Like Effector Pseudogene 3
  • CICE 3

External Ids for CIDECP Gene

Previous GeneCards Identifiers for CIDECP Gene

  • GC03M010033
  • GC03M010056
  • GC03M009995

Summaries for CIDECP Gene

GeneCards Summary for CIDECP Gene

CIDECP (Cell Death-Inducing DFFA-Like Effector C Pseudogene) is a Pseudogene.

Additional gene information for CIDECP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CIDECP Gene

Genomics for CIDECP Gene

Regulatory Elements for CIDECP Gene

Enhancers for CIDECP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H009975 1.6 Ensembl ENCODE dbSUPER 11.5 +48.2 48152 4 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A ZNF2 YY1 ZNF766 FOS BRPF1 TTLL3 SETD5 FANCD2 THUMPD3-AS1 BRK1 EMC3-AS1 PRRT3 CIDECP ENSG00000269894
GH03H010024 1.2 ENCODE 6.5 +0.1 113 2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 CBX5 ZNF207 ZNF143 SRGAP3-AS3 BRK1 ATP2B2-IT1 ENSG00000230599 FANCD2OS CRELD1 CYCSP10 FANCD2 CIDECP MARK2P2
GH03H009969 0.7 ENCODE 10.7 +55.9 55925 2 CEBPG ZBTB40 CTBP1 GATA3 FOXK2 SCRT2 FOSL2 FOS SMARCE1 SMARCA5 BRK1 FANCD2OS RNU6-882P IL17RC IL17RE CIDECP FANCD2 VHL RPUSD3 JAGN1
GH03H009994 0.6 Ensembl ENCODE 12.3 +32.1 32101 0 CEBPB BRK1 FANCD2 CIDECP RNU6-670P FANCD2P1 CYCSP10
GH03H009995 0.4 Ensembl 12.3 +31.7 31665 0 CEBPB BRK1 FANCD2 CIDECP RNU6-670P ENSG00000206567 FANCD2P1 CYCSP10
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CIDECP on UCSC Golden Path with GeneCards custom track

Promoters for CIDECP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000148353 65 1801 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 CBX5 ZNF207 ZNF143

Genomic Location for CIDECP Gene

Chromosome:
3
Start:
10,014,238 bp from pter
End:
10,026,365 bp from pter
Size:
12,128 bases
Orientation:
Minus strand

Genomic View for CIDECP Gene

Genes around CIDECP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CIDECP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CIDECP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CIDECP Gene

Proteins for CIDECP Gene

Post-translational modifications for CIDECP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CIDECP Gene

Domains & Families for CIDECP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CIDECP Gene

Function for CIDECP Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CIDECP
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CIDECP Gene

Localization for CIDECP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CIDECP Gene

Pathways & Interactions for CIDECP Gene

SuperPathways for CIDECP Gene

No Data Available

Interacting Proteins for CIDECP Gene

Gene Ontology (GO) - Biological Process for CIDECP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CIDECP Gene

Drugs & Compounds for CIDECP Gene

No Compound Related Data Available

Transcripts for CIDECP Gene

Unigene Clusters for CIDECP Gene

Cell death-inducing DFFA-like effector c pseudogene:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CIDECP
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CIDECP Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b
SP1: - -
SP2: -
SP3:

Relevant External Links for CIDECP Gene

GeneLoc Exon Structure for
CIDECP
ECgene alternative splicing isoforms for
CIDECP

Expression for CIDECP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CIDECP Gene

NURSA nuclear receptor signaling pathways regulating expression of CIDECP Gene:

CIDECP

SOURCE GeneReport for Unigene cluster for CIDECP Gene:

Hs.635072
genes like me logo Genes that share expression patterns with CIDECP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CIDECP Gene

Orthologs for CIDECP Gene

Evolution for CIDECP Gene

ENSEMBL:
Gene Tree for CIDECP (if available)
TreeFam:
Gene Tree for CIDECP (if available)

No data available for Orthologs for CIDECP Gene

Paralogs for CIDECP Gene

No data available for Paralogs for CIDECP Gene

Variants for CIDECP Gene

Sequence variations from dbSNP and Humsavar for CIDECP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000234956 -- 10,017,096(+) AATGT(A/G)CAGGT downstream-variant-500B
rs1000292958 -- 10,023,304(+) TAGTT(A/G)CTAGA intron-variant
rs1000391424 -- 10,023,113(+) TGTAG(A/G)GATTG intron-variant
rs1000502311 -- 10,017,410(+) AATAG(A/T)TTGAC downstream-variant-500B
rs1000697261 -- 10,027,722(+) AACAC(C/G)GTGAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CIDECP Gene

Variant ID Type Subtype PubMed ID
dgv762e201 CNV deletion 23290073
esv2670751 CNV deletion 23128226
esv2724891 CNV deletion 23290073
esv2724893 CNV deletion 23290073
esv3595258 CNV loss 21293372
nsv1013567 CNV loss 25217958
nsv1073204 CNV deletion 25765185
nsv521391 CNV loss 19592680
nsv523205 CNV loss 19592680
nsv589648 CNV loss 21841781

Relevant External Links for CIDECP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CIDECP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CIDECP Gene

Disorders for CIDECP Gene

Relevant External Links for CIDECP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CIDECP

No disorders were found for CIDECP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CIDECP Gene

Publications for CIDECP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for CIDECP Gene

Sources for CIDECP Gene

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