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Aliases for CIDECP Gene

Aliases for CIDECP Gene

  • Cell Death-Inducing DFFA-Like Effector C Pseudogene 2 3 5
  • Cell Death-Inducing CIDE-Like Effector Pseudogene 3
  • CICE 3

External Ids for CIDECP Gene

Previous GeneCards Identifiers for CIDECP Gene

  • GC03M010033
  • GC03M010056
  • GC03M009995

Summaries for CIDECP Gene

GeneCards Summary for CIDECP Gene

CIDECP (Cell Death-Inducing DFFA-Like Effector C Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CIDECP Gene

Genomics for CIDECP Gene

Regulatory Elements for CIDECP Gene

Enhancers for CIDECP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G009975 1.6 Ensembl ENCODE dbSUPER 11.5 +48.2 48152 4.8 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ARID4B SIN3A ZNF2 YY1 ZNF766 FANCD2 BRK1 PRRT3 CIDECP IL17RE RPUSD3 VHL JAGN1 LINC00852 ARPC4
GH03G010554 1.2 FANTOM5 ENCODE 10.2 -527.5 -527486 1.3 ELF3 ATF1 PKNOX1 CBX3 ARID4B SIN3A BMI1 ZSCAN9 ZBTB40 CHAMP1 EMC3-AS1 PRRT3 CIDECP ATP2B2 GC03M010552 GC03P010530
GH03G009648 1.1 ENCODE 10.2 +376.6 376575 2.2 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT ARID4B SIN3A ZNF2 YY1 EMC3-AS1 PRRT3 CIDECP MTMR14 CPNE9
GH03G010460 1.1 ENCODE 10.2 -433.9 -433947 0.2 MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZBTB7B SLC30A9 ZNF766 ZNF143 EMC3-AS1 MIR885 PRRT3 CIDECP GHRLOS GC03P010530 GC03M010552
GH03G009969 1 ENCODE 10.7 +55.9 55925 2.6 PKNOX1 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 GLIS2 GATA2 FOS BRK1 FANCD2OS IL17RC RNU6-882P IL17RE FANCD2 CIDECP VHL RPUSD3 JAGN1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CIDECP on UCSC Golden Path with GeneCards custom track

Promoters for CIDECP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000148353 65 1801 MLX CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZNF610 GLIS1

Genomic Location for CIDECP Gene

Chromosome:
3
Start:
10,014,238 bp from pter
End:
10,026,365 bp from pter
Size:
12,128 bases
Orientation:
Minus strand

Genomic View for CIDECP Gene

Genes around CIDECP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CIDECP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CIDECP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CIDECP Gene

Proteins for CIDECP Gene

Post-translational modifications for CIDECP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CIDECP Gene

Domains & Families for CIDECP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CIDECP Gene

Function for CIDECP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CIDECP Gene

Localization for CIDECP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CIDECP Gene

Pathways & Interactions for CIDECP Gene

SuperPathways for CIDECP Gene

No Data Available

Interacting Proteins for CIDECP Gene

Gene Ontology (GO) - Biological Process for CIDECP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CIDECP Gene

Drugs & Compounds for CIDECP Gene

No Compound Related Data Available

Transcripts for CIDECP Gene

Unigene Clusters for CIDECP Gene

Cell death-inducing DFFA-like effector c pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CIDECP Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b
SP1: - -
SP2: -
SP3:

Relevant External Links for CIDECP Gene

GeneLoc Exon Structure for
CIDECP
ECgene alternative splicing isoforms for
CIDECP

Expression for CIDECP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CIDECP Gene

NURSA nuclear receptor signaling pathways regulating expression of CIDECP Gene:

CIDECP

SOURCE GeneReport for Unigene cluster for CIDECP Gene:

Hs.635072
genes like me logo Genes that share expression patterns with CIDECP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CIDECP Gene

Orthologs for CIDECP Gene

Evolution for CIDECP Gene

ENSEMBL:
Gene Tree for CIDECP (if available)
TreeFam:
Gene Tree for CIDECP (if available)

No data available for Orthologs for CIDECP Gene

Paralogs for CIDECP Gene

No data available for Paralogs for CIDECP Gene

Variants for CIDECP Gene

Sequence variations from dbSNP and Humsavar for CIDECP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000234956 -- 10,017,096(+) AATGT(A/G)CAGGT downstream-variant-500B
rs1000292958 -- 10,023,304(+) TAGTT(A/G)CTAGA intron-variant
rs1000391424 -- 10,023,113(+) TGTAG(A/G)GATTG intron-variant
rs1000502311 -- 10,017,410(+) AATAG(A/T)TTGAC downstream-variant-500B
rs1000697261 -- 10,027,722(+) AACAC(C/G)GTGAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CIDECP Gene

Variant ID Type Subtype PubMed ID
dgv762e201 CNV deletion 23290073
esv2670751 CNV deletion 23128226
esv2724891 CNV deletion 23290073
esv2724893 CNV deletion 23290073
esv3595258 CNV loss 21293372
nsv1013567 CNV loss 25217958
nsv1073204 CNV deletion 25765185
nsv521391 CNV loss 19592680
nsv523205 CNV loss 19592680
nsv589648 CNV loss 21841781

Relevant External Links for CIDECP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CIDECP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CIDECP Gene

Disorders for CIDECP Gene

Relevant External Links for CIDECP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CIDECP

No disorders were found for CIDECP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CIDECP Gene

Publications for CIDECP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CIDECP Gene

Sources for CIDECP Gene

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