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Aliases for CIDECP Gene

Aliases for CIDECP Gene

  • Cell Death-Inducing DFFA-Like Effector C Pseudogene 2 3 5
  • Cell Death-Inducing CIDE-Like Effector Pseudogene 3
  • CICE 3

External Ids for CIDECP Gene

Previous GeneCards Identifiers for CIDECP Gene

  • GC03M010033
  • GC03M010056
  • GC03M009995

Summaries for CIDECP Gene

GeneCards Summary for CIDECP Gene

CIDECP (Cell Death-Inducing DFFA-Like Effector C Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CIDECP Gene

Genomics for CIDECP Gene

Regulatory Elements for CIDECP Gene

Enhancers for CIDECP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F009994 0.8 Ensembl ENCODE 12.3 +31.9 31949 0.8 CEBPB BRK1 CIDECP FANCD2 RNU6-670P ENSG00000206567 FANCD2P1 CYCSP10
GH03F009975 0.5 Ensembl ENCODE 11.5 +48.2 48152 4.8 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A ZNF2 FOS KLF13 SMARCB1 THUMPD3-AS1 FANCD2 ENSG00000269894 BRK1 PRRT3 CIDECP IL17RE RPUSD3 VHL JAGN1
GH03F009969 0.2 ENCODE 10.7 +55.9 55925 2.6 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 GLIS2 FOS SP3 REST BRK1 FANCD2OS RNU6-882P IL17RC IL17RE CIDECP FANCD2 VHL RPUSD3 JAGN1
GH03F009648 0.2 ENCODE 10.3 +376.6 376575 2.2 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A ZNF2 ZNF143 ZNF207 FOS RNU6-882P EMC3-AS1 PRRT3 CIDECP MTMR14 CPNE9
GH03F009552 0.2 ENCODE 10.2 +474.0 474014 0.2 CBX3 SUZ12 SIN3A ZBTB40 ZSCAN9 CHAMP1 CREM TCF7L2 ZNF202 TFE3 RAD18 THUMPD3-AS1 GHRLOS EMC3-AS1 PRRT3 CIDECP LHFPL4 GC03M009538
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CIDECP on UCSC Golden Path with GeneCards custom track

Promoters for CIDECP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001357076 -35 2001 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF207

Genomic Location for CIDECP Gene

Chromosome:
3
Start:
10,014,238 bp from pter
End:
10,026,365 bp from pter
Size:
12,128 bases
Orientation:
Minus strand

Genomic View for CIDECP Gene

Genes around CIDECP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CIDECP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CIDECP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CIDECP Gene

Proteins for CIDECP Gene

Post-translational modifications for CIDECP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CIDECP Gene

Domains & Families for CIDECP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CIDECP Gene

Function for CIDECP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CIDECP Gene

Localization for CIDECP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CIDECP Gene

Pathways & Interactions for CIDECP Gene

SuperPathways for CIDECP Gene

No Data Available

Interacting Proteins for CIDECP Gene

Gene Ontology (GO) - Biological Process for CIDECP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CIDECP Gene

Transcripts for CIDECP Gene

Unigene Clusters for CIDECP Gene

Cell death-inducing DFFA-like effector c pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CIDECP Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b
SP1: - -
SP2: -
SP3:

Relevant External Links for CIDECP Gene

GeneLoc Exon Structure for
CIDECP
ECgene alternative splicing isoforms for
CIDECP

Expression for CIDECP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CIDECP Gene

NURSA nuclear receptor signaling pathways regulating expression of CIDECP Gene:

CIDECP

SOURCE GeneReport for Unigene cluster for CIDECP Gene:

Hs.635072
genes like me logo Genes that share expression patterns with CIDECP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CIDECP Gene

Orthologs for CIDECP Gene

Evolution for CIDECP Gene

ENSEMBL:
Gene Tree for CIDECP (if available)
TreeFam:
Gene Tree for CIDECP (if available)

No data available for Orthologs for CIDECP Gene

Paralogs for CIDECP Gene

No data available for Paralogs for CIDECP Gene

Variants for CIDECP Gene

Sequence variations from dbSNP and Humsavar for CIDECP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10212432 -- 10,027,480(+) TTCCC(C/T)CACCT intron-variant, upstream-variant-2KB
rs1053207 -- 10,023,682(-) GTAAC(C/G)TTTGA nc-transcript-variant
rs1053208 -- 10,023,676(-) TTTGA(C/T)CTGTA nc-transcript-variant
rs1053210 -- 10,023,633(-) TGAAC(A/G)TGAAG nc-transcript-variant
rs1053212 -- 10,023,610(-) GATAC(A/G)TACTC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CIDECP Gene

Variant ID Type Subtype PubMed ID
dgv762e201 CNV deletion 23290073
esv2670751 CNV deletion 23128226
esv2724891 CNV deletion 23290073
esv2724893 CNV deletion 23290073
esv3595258 CNV loss 21293372
nsv1013567 CNV loss 25217958
nsv1073204 CNV deletion 25765185
nsv521391 CNV loss 19592680
nsv523205 CNV loss 19592680
nsv589648 CNV loss 21841781

Relevant External Links for CIDECP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CIDECP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CIDECP Gene

Disorders for CIDECP Gene

Relevant External Links for CIDECP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CIDECP

No disorders were found for CIDECP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CIDECP Gene

Publications for CIDECP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CIDECP Gene

Sources for CIDECP Gene

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