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Aliases for CICP22 Gene

Subcategory (RNA class) for CICP22 Gene

lncRNA

Aliases for CICP22 Gene

  • Capicua Transcriptional Repressor Pseudogene 22 2 3 5

External Ids for CICP22 Gene

ORGUL Members for CICP22 Gene

Previous GeneCards Identifiers for CICP22 Gene

  • GC07M039835

Summaries for CICP22 Gene

GeneCards Summary for CICP22 Gene

CICP22 (Capicua Transcriptional Repressor Pseudogene 22) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CICP22 Gene

Genomics for CICP22 Gene

Regulatory Elements for CICP22 Gene

Enhancers for CICP22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F039520 0.2 ENCODE 13.1 +277.9 277888 1.1 TBP CTCF ZNF654 REST RAD21 TEAD3 KAT8 GTF3C2 ZGPAT POLR3A ENSG00000228554 CICP22 LOC105375240 YAE1D1 LOC105375237 GC07P039498
GH07F040132 0.5 ENCODE 11.6 -335.9 -335898 2.7 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 MPLKIP LINC00265 CICP22 YAE1D1 LOC100101126 RWDD4P2 ENSG00000259826 ENSG00000228554 GC07P040132
GH07F039947 0.6 ENCODE 11.2 -152.4 -152410 6.7 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 CICP22 LINC00265 PIR43898 GC07M039837
GH07F039620 0.4 ENCODE 9.9 +174.7 174716 6.8 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A YBX1 DMAP1 YY1 ZNF143 LINC00265 YAE1D1 LOC100101126 ENSG00000259826 CICP22 RALA GC07M039668
GH07F039810 0.2 ENCODE 0.4 -12.0 -11990 0.3 PKNOX1 ATF1 ARNT ELK1 GATA2 NCOA1 MBD2 MEF2D SMARCA4 PBX2 LOC101928688 CICP22
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CICP22 on UCSC Golden Path with GeneCards custom track

Genomic Location for CICP22 Gene

Chromosome:
7
Start:
39,796,593 bp from pter
End:
39,798,437 bp from pter
Size:
1,845 bases
Orientation:
Minus strand

Genomic View for CICP22 Gene

Genes around CICP22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CICP22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CICP22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CICP22 Gene

Proteins for CICP22 Gene

Post-translational modifications for CICP22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CICP22 Gene

Domains & Families for CICP22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CICP22 Gene

Function for CICP22 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CICP22 Gene

Localization for CICP22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CICP22 Gene

Pathways & Interactions for CICP22 Gene

SuperPathways for CICP22 Gene

No Data Available

Interacting Proteins for CICP22 Gene

Gene Ontology (GO) - Biological Process for CICP22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CICP22 Gene

Transcripts for CICP22 Gene

mRNA/cDNA for CICP22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CICP22 Gene

No ASD Table

Relevant External Links for CICP22 Gene

GeneLoc Exon Structure for
CICP22
ECgene alternative splicing isoforms for
CICP22

Expression for CICP22 Gene

mRNA expression in normal human tissues for CICP22 Gene

NURSA nuclear receptor signaling pathways regulating expression of CICP22 Gene:

CICP22
genes like me logo Genes that share expression patterns with CICP22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CICP22 Gene

Orthologs for CICP22 Gene

Evolution for CICP22 Gene

ENSEMBL:
Gene Tree for CICP22 (if available)
TreeFam:
Gene Tree for CICP22 (if available)

No data available for Orthologs for CICP22 Gene

Paralogs for CICP22 Gene

No data available for Paralogs for CICP22 Gene

Variants for CICP22 Gene

Relevant External Links for CICP22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CICP22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CICP22 Gene

Disorders for CICP22 Gene

No disorders were found for CICP22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CICP22 Gene

Publications for CICP22 Gene

No publications were found for CICP22 Gene.

Products for CICP22 Gene

Sources for CICP22 Gene

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