Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CICP20 Gene

Aliases for CICP20 Gene

  • Capicua Transcriptional Repressor Pseudogene 20 2 3 5

External Ids for CICP20 Gene

Previous GeneCards Identifiers for CICP20 Gene

  • GC07M045858

Summaries for CICP20 Gene

GeneCards Summary for CICP20 Gene

CICP20 (Capicua Transcriptional Repressor Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CICP20 Gene

Genomics for CICP20 Gene

Regulatory Elements for CICP20 Gene

Enhancers for CICP20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G044845 1.2 ENCODE 12.9 +971.5 971475 4.2 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 CICP20 SNHG15 PPIA ZMIZ2 H2AFV PIR39901
GH07G045071 1.2 dbSUPER 12.4 +744.5 744469 5.3 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 CCM2 TBRG4 SNORA5C SNORA5B ENSG00000260997 DDX56 CICP20 SNORA5A SNHG15 LOC100128364
GH07G045072 1.2 dbSUPER 12.4 +744.3 744338 5.4 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 CCM2 TBRG4 SNORA5C SNORA5B ENSG00000260997 DDX56 CICP20 SNORA5A SNHG15 LOC100128364
GH07G045075 1.1 dbSUPER 12.4 +744.4 744447 5.0 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 CCM2 TBRG4 SNORA5C SNORA5B ENSG00000260997 DDX56 CICP20 SNORA5A SNHG15 LOC100128364
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CICP20 on UCSC Golden Path with GeneCards custom track

Genomic Location for CICP20 Gene

Chromosome:
7
Start:
45,815,326 bp from pter
End:
45,819,058 bp from pter
Size:
3,733 bases
Orientation:
Minus strand

Genomic View for CICP20 Gene

Genes around CICP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CICP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CICP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CICP20 Gene

Proteins for CICP20 Gene

Post-translational modifications for CICP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CICP20 Gene

Domains & Families for CICP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CICP20 Gene

Function for CICP20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CICP20 Gene

Localization for CICP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CICP20 Gene

Pathways & Interactions for CICP20 Gene

SuperPathways for CICP20 Gene

No Data Available

Interacting Proteins for CICP20 Gene

Gene Ontology (GO) - Biological Process for CICP20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CICP20 Gene

Transcripts for CICP20 Gene

mRNA/cDNA for CICP20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CICP20 Gene

No ASD Table

Relevant External Links for CICP20 Gene

GeneLoc Exon Structure for
CICP20
ECgene alternative splicing isoforms for
CICP20

Expression for CICP20 Gene

NURSA nuclear receptor signaling pathways regulating expression of CICP20 Gene:

CICP20
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CICP20 Gene

Orthologs for CICP20 Gene

Evolution for CICP20 Gene

ENSEMBL:
Gene Tree for CICP20 (if available)
TreeFam:
Gene Tree for CICP20 (if available)

No data available for Orthologs for CICP20 Gene

Paralogs for CICP20 Gene

No data available for Paralogs for CICP20 Gene

Variants for CICP20 Gene

Relevant External Links for CICP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CICP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CICP20 Gene

Disorders for CICP20 Gene

No disorders were found for CICP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CICP20 Gene

Publications for CICP20 Gene

No publications were found for CICP20 Gene.

Products for CICP20 Gene

Sources for CICP20 Gene

Content
Loading form....