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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CHST11 Gene

protein-coding   GIFtS: 55
GCID: GC12P104783

carbohydrate (chondroitin 4) sulfotransferase 11

 Explore 9 diseases affiliated with
CHST11 via our new
 Human Malady Compendium 
Biological research products
for CHST11
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Carbohydrate (Chondroitin 4) Sulfotransferase 111 2     C4ST-12 3
C4ST11 2 3     EC 2.8.2.53 8
C4ST1 2     C4St-11
HSA2695371 2     Carbohydrate Sulfotransferase 112
Chondroitin 4-O-Sulfotransferase 12 3     IgH/CHST11 Fusion2
C4S-12 3     Chondroitin 4-Sulfotransferase 13

External Ids:    HGNC: 174221   Entrez Gene: 505152   Ensembl: ENSG000001713107   OMIM: 6101285   UniProtKB: Q9NPF23   

Export aliases for CHST11 gene to outside databases

Previous GC identifers: GC12P103353 GC12P103351 GC12P101909


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CHST11:
The protein encoded by this gene belongs to the sulfotransferase 2 family. It is localized to the golgi membrane, and
catalyzes the transfer of sulfate to position 4 of the N-acetylgalactosamine (GalNAc) residue of chondroitin.
Chondroitin sulfate constitutes the predominant proteoglycan present in cartilage, and is distributed on the surfaces
of many cells and extracellular matrices. A chromosomal translocation involving this gene and IgH, t(12;14)(q23;q32),
has been reported in a patient with B-cell chronic lymphocytic leukemia. Alternatively spliced transcript variants
encoding different isoforms have been found for this gene. (provided by RefSeq, Aug 2011)

UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2
Function: Catalyzes the transfer of sulfate to position 4 of the N-acetylgalactosamine (GalNAc) residue of chondroitin.
Chondroitin sulfate constitutes the predominant proteoglycan present in cartilage and is distributed on the surfaces
of many cells and extracellular matrices. Can also sulfate Gal residues in desulfated dermatan sulfate. Preferentially
sulfates in GlcA->GalNAc unit than in IdoA->GalNAc unit. Does not form 4, 6-di-O-sulfated GalNAc when chondroitin
sulfate C is used as an acceptor

Gene Wiki entry for CHST11


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_029419.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CHST11 gene promoter:
         NF-1   AML1a   MyoD   XBP-1   Nkx2-5   YY1   GATA-1   C/EBPalpha   PPAR-gamma1   PPAR-gamma2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCHST11 promoter sequence
   Search SABiosciences Chromatin IP Primers for CHST11

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHST11


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q   Ensembl cytogenetic band:  12q23.3   HGNC cytogenetic band: 12q23.3

CHST11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CHST11 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12P104783:  view genomic region     (about GC identifiers)

Start:
104,849,073 bp from pter      End:
105,155,792 bp from pter
Size:
306,720 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2 (See protein sequence)
Recommended Name: Carbohydrate sulfotransferase 11  
Size: 352 amino acids; 41555 Da
Subcellular location: Golgi apparatus membrane; Single-pass type II membrane protein (By similarity)
Secondary accessions: A8K4F8 Q9NXY6 Q9NY36
Alternative splicing: 2 isoforms:  Q9NPF2-1   Q9NPF2-2   

Explore the universe of human proteins at neXtProt for CHST11: NX_Q9NPF2

Post-translational modifications:

  • N-glycosylated; required for activity and stability1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9NPF2

  • 4/7 DME Specific Peptides for CHST11 (Q9NPF2) (see all 7)
     CCRKGSR  AKSTRTTD  PVMRRNPF  YCYVPKVAC 

    CHST11 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001167453.1  NP_060883.1  

    ENSEMBL proteins: 
     ENSP00000449093   ENSP00000450004   ENSP00000305725   ENSP00000448678   ENSP00000449095  
    Reactome Protein details: Q9NPF2
    Human Recombinant Protein Products: 
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    Novus Biologicals CHST11 Protein
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    Uscn Proteins for CHST11

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane TAS--
    GO:0016021integral to membrane NAS11056388


    CHST11 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for CHST11


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CHST11 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR005331 Sulfotransferase
     IPR018011 Carb_sulfotransferase-rel

    Graphical View of Domain Structure for InterPro Entry Q9NPF2

    ProtoNet protein and cluster: Q9NPF2

    UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2
    Similarity: Belongs to the sulfotransferase 2 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2
    Function: Catalyzes the transfer of sulfate to position 4 of the N-acetylgalactosamine (GalNAc) residue of chondroitin.
    Chondroitin sulfate constitutes the predominant proteoglycan present in cartilage and is distributed on the surfaces
    of many cells and extracellular matrices. Can also sulfate Gal residues in desulfated dermatan sulfate. Preferentially
    sulfates in GlcA->GalNAc unit than in IdoA->GalNAc unit. Does not form 4, 6-di-O-sulfated GalNAc when chondroitin
    sulfate C is used as an acceptor
    Catalytic activity: 3'-phosphoadenylyl sulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 4'-sulfate
    Biophysicochemical properties: Kinetic parameters: KM=0.5 uM for PAPS; KM=2.1 mM for chondroitin;

    Enzyme Number (IUBMB): EC 2.8.2.51 2

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    8/82 QIAGEN miScript miRNA Assays for microRNAs that regulate CHST11 (see all 82):
    hsa-miR-26a-2* hsa-miR-4254 hsa-miR-607 hsa-miR-519a hsa-miR-1273d hsa-miR-509-3-5p hsa-miR-130b hsa-miR-3690
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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001537N-acetylgalactosamine 4-O-sulfotransferase activity IDA11056388
    GO:0008146sulfotransferase activity ----
    GO:0047756chondroitin 4-sulfotransferase activity IDA11056388
    GO:0050659N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA--


    CHST11 for ontologies           About GeneDecksing


    Animal Models:
         6 MGI mutant phenotypes (inferred from 1 allele(MGI details for Chst11):
     craniofacial  growth/size  limbs/digits/tail  mortality/aging  respiratory system 
     skeleton 

    CHST11 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1MPS IIIC - Sanfilippo syndrome C
    8/14 pathways (see all 14)
    MPS VI - Maroteaux-Lamy syndrome1.00
    MPS VII - Sly syndrome1.00
    MPS IIIC - Sanfilippo syndrome C1.00
    MPS IIIA - Sanfilippo syndrome A1.00
    MPS I - Hurler syndrome1.00
    MPS IIID - Sanfilippo syndrome D1.00
    Mucopolysaccharidoses1.00
    MPS IX - Natowicz syndrome1.00
    2dermatan sulfate biosynthesis
    Glycosaminoglycan biosynthesis - chondroitin sulfate0.73
    chondroitin sulfate biosynthesis (late stages)0.32
    chondroitin sulfate biosynthesis0.64
    Chondroitin sulfate biosynthesis0.24
    3Disease
    Disease1.00
    4Metabolism
    Metabolism1.00
    5Endochondral Ossification
    Endochondral Ossification1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    4 BioSystems Pathways for CHST11 
        Endochondral Ossification
    chondroitin sulfate biosynthesis (late stages)
    metapathway biotransformation
    chondroitin sulfate biosynthesis

    5/18        Reactome Pathways for CHST11 (see all 18)
        Chondroitin sulfate/dermatan sulfate metabolism
    MPS VI - Maroteaux-Lamy syndrome
    Metabolism
    Disease
    MPS II - Hunter syndrome


    2         Kegg Pathways  (Kegg details for CHST11):
        Glycosaminoglycan biosynthesis - chondroitin sulfate
    Sulfur metabolism


    CHST11 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CHST11

    STRING Interaction Network Preview (showing 5 interactants - click image to see 18)

    5/18 Interacting proteins for CHST11 (ENSP000003057254) via UniProtKB, MINT, STRING, and/or I2D (see all 18)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    BCANENSP000003312104STRING: ENSP00000331210
    BGNENSP000003273364STRING: ENSP00000327336
    BPNT1ENSP000003188524STRING: ENSP00000318852
    CHPFENSP000002437764STRING: ENSP00000243776
    CHST15ENSP000003339474STRING: ENSP00000333947
    About this table

    Gene Ontology (GO): 5/21 biological process terms (GO ID links to tree view) (see all 21):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002063chondrocyte development IEA--
    GO:0005975carbohydrate metabolic process TAS--
    GO:0007585respiratory gaseous exchange IEA--
    GO:0009791post-embryonic development IEA--
    GO:0016051carbohydrate biosynthetic process IEA--


    CHST11 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CHST11 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CHST11

    5 HMDB Compounds for CHST11    About this table
    CompoundSynonyms CAS #PubMed Ids
    Adenosine 3',5'-diphosphate3,5-Diphosphoadenosine (see all 10)1053-73-2--
    ChondroitinChondroitin-D-glucuronate (see all 5)9007-27-6--
    Chondroitin 4-sulfateChondroitin 4'-sulfate (see all 2)----
    DermatanChondroitin sulfate B (see all 13)24967-94-0--
    Phosphoadenosine phosphosulfate3'-Phospho-5'-adenylyl sulfate (see all 9)482-67-7--
    7 Novoseek chemical compound relationships for CHST11 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    chondroitin 92.4 52 1751554 (4), 11056388 (3), 16079159 (3), 10722746 (2) (see all 11)
    dermatan sulfate 76.7 2 12847091 (1)
    chondroitin sulfate 76.5 6 12847091 (1), 19915053 (1), 17597120 (1), 16079159 (1)
    3-phosphoadenosine 5'-phosphosulfate 71.9 4 11056388 (1), 10722746 (1)
    sulfate 70.3 8 11056388 (1), 10722746 (1), 16079159 (1)
    heparan sulfate 45.5 2 17113869 (1)
    polysaccharide 34.2 1 17113869 (1)

    Search CenterWatch for drugs/clinical trials and news about CHST11 / CHSTB 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CHST11 gene (2 alternative transcripts): 
    NM_001173982.1  NM_018413.5  

    Unigene Cluster for CHST11:

    Carbohydrate (chondroitin 4) sulfotransferase 11
    Hs.17569  [show with all ESTs]
    Unigene Representative Sequence: NM_018413
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000550711 ENST00000547956 ENST00000549260(uc001tky.3) ENST00000303694(uc001tkz.3)
    ENST00000546689 ENST00000549016

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    hsa-miR-26a-2* hsa-miR-4254 hsa-miR-607 hsa-miR-519a hsa-miR-1273d hsa-miR-509-3-5p hsa-miR-130b hsa-miR-3690
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    Additional cDNA sequence: 

    AB042326.1 AF131762.1 AF239820.1 AJ269537.2 AJ289134.1 AK123676.1 AK290923.1 AK313217.1 
    AL833176.1 AY533204.1 AY533205.1 BC013315.1 BC030271.1 BC061524.1 

    5 DOTS entries:

    DT.97765459  DT.100784578  DT.100784575  DT.121137744  DT.91649628 

    24/154 AceView cDNA sequences (see all 154):

    BU174298 H97252 BQ009789 AJ289134 AA634815 BC061524 CD364688 BU632779 
    AW961343 CD676264 AA465726 CA309228 CB529524 CR608680 AW593088 CA432716 
    BM763953 AW028754 R69560 AA318376 AA553685 BU838915 CD673275 CD367266 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for CHST11    About this scheme

    ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3
    SP1:              -           -         
    SP2:                          -         
    SP3:              -                     
    SP4:                                    


    ECgene alternative splicing isoforms for CHST11

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CHST11 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See CHST11 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CHST11

    SOURCE GeneReport for Unigene cluster: Hs.17569

    UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2
    Tissue specificity: Widely expressed. Highly expressed in spleen, thymus, bone marrow, peripheral blood leukocytes,
    lymph node, heart, brain, lung and placenta

        SABiosciences Expression via Pathway-Focused PCR Array including CHST11: 
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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for CHST11 gene from 5/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CHST111 carbohydrate (chondroitin 4) sulfotransferase 11 84.93(n)
    93.91(a)
      418081  XM_416316.3  XP_416316.3 
    lizard
    (Anolis carolinensis)
    Reptilia CHST116
    --
    95(a)
    1 ↔ 1
    5(18611229-18612086)
    African clawed frog
    (Xenopus laevis)
    Amphibia chst11-prov2 carbohydrate sulfotransferase 11 72.65(n)    BC056117.1 
    zebrafish
    (Danio rerio)
    Actinopterygii chst111 carbohydrate (chondroitin 4) sulfotransferase 11 75.31(n)
    78.67(a)
      404232  NM_212824.2  NP_997989.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG317431 CG31743 51.02(n)
    39.71(a)
      326156  NM_135976.2  NP_609820.1 


    ENSEMBL Gene Tree for CHST11 (if available)
    TreeFam Gene Tree for CHST11 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CHST11 gene
    CHST122  CHST132  CHST92  CHST102  CHST82  CHST142  
    6 SIMAP similar genes for CHST11 using alignment to 4 protein entries:     CHSTB_HUMAN (see all proteins):
    CHST13    CHST9    CHST8    CHST12    CHST10    CHST14

    CHST11 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/5661 NCBI SNPs in CHST11 are shown (see all 5661    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2011407771,2
    C,other110669761(+) CCAACA/GAGGCA 4 K E mis10--------
    rs761674771,2
    C,F,--101907521(+) CTCCAG/CGAAGG 2 -- us2k13Minor allele frequency- C:0.05NA 124
    rs1123346111,2
    --101907642(+) GAGGTG/AGTAGC 2 -- us2k12Minor allele frequency- A:0.08CSA WA 120
    rs111120631,2
    C,--101908041(+) GATGAT/CGGTGG 2 -- us2k12Minor allele frequency- C:0.29CSA WA 120
    rs38127991,2
    C,H--101908051(-) CCCCAC/TCTCCC 2 -- us2k13Minor allele frequency- T:0.00EA NS NA 178
    rs79678461,2
    C,--101908496(+) TGACTT/CGATAA 2 -- us2k13Minor allele frequency- C:0.31WA CSA 121
    rs113156031,2
    C,--101908663(+) TCTTT-/CCATGT 2 -- us2k10--------
    rs116128131,2
    C,H,--101909301(+) GGCCGA/GGGACT 2 -- us2k10--------
    rs37513181,2
    C,F,H,--101909575(+) GACAGC/TCACAG 2 -- ut51 ese310Minor allele frequency- T:0.04EA NS NA 2384
    rs1117897281,2
    C,--101909873(+) TCCGGT/CCCGCG 2 -- ut513Minor allele frequency- C:0.13NA WA 240

    HapMap Linkage Disequilibrium report for CHST11 (104849073 - 105099073 bp, first 250kb of CHST11)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for CHST11
         1 CNV: 4786
         3 Indels: 48935 71563 71562

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHST11
    DNA2.0 Custom Variant and Variant Library Synthesis for CHST11

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CHST11 for disorders           About GeneDecksing

    OMIM gene information: 610128    OMIM disorders: --

    UniProtKB/Swiss-Prot: CHSTB_HUMAN, Q9NPF2
  • Note=A chromosomal aberration involving CHST11 is found in B-cell chronic lymphocytic leukemias. Translocation
  • t(12;14)(q23;q32) with IgH

    9 diseases for CHST11:    About MalaCards
    chronic lymphocytic leukemia    lymphocytic leukemia    leukemia    cutaneous lupus erythematosus
    costello syndrome    lupus erythematosus    prostate cancer    prostatitis
    malaria

    1 disease from the University of Copenhagen DISEASES database for CHST11:
    Cutaneous lupus erythematosus
    Human Genome Epidemiology (HuGE) Navigator: CHST11 (5 documents)

    Export disorders for CHST11 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CHST11 gene, integrated from 9 sources (see all 35):
    (articles sorted by number of sources associating them with CHST11)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning and expression of two distinct human chondroitin 4- O-sulfotransferases that belong to the HNK-1 sulfotransferase gene family. (PubMed id 10781601)1, 2, 3 Hiraoka N.... Fukuda M. (2000)
    2. Molecular cloning, expression, and chromosomal mapping of human chondroitin 4-sulfotransferase, whose expression pattern in human tissues is different from that of chondroitin 6-sulfotransferase. (PubMed id 11056388)1, 2, 9 Okuda T.... Habuchi O. (2000)
    3. Deregulation of the carbohydrate (chondroitin 4) sulfotransferase 11 (CHST11) gene in a B-cell chronic lymphocytic leukemia with a t(12;14)(q23;q32). (PubMed id 15273723)1, 2, 9 Schmidt H.H.... Chaganti R.S.K. (2004)
    4. Specificities of three distinct human chondroitin/dermatan N- acetylgalactosamine 4-O-sulfotransferases demonstrated using partially desulfated dermatan sulfate as an acceptor. Implication of differential roles in dermatan sulfate biosynthesis. (PubMed id 12847091)1, 2, 9 Mikami T.... Sugahara K. (2003)
    5. N-linked oligosaccharides are required to produce and stabilize the active form of chondroitin 4-sulphotransferase-1. (PubMed id 15628971)1, 2 Yusa A.... Habuchi O. (2005)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    8. Molecular cloning and expression of chondroitin 4-sulfotransferase. (PubMed id 10722746)1, 9 Yamauchi S....Habuchi O. (2000)
    9. Identification and characterization of TGFbeta-depend ent and -independent cis-regulatory modules in the C4ST-1/CHST11 locus. (PubMed id 19937589)1, 9 Willis C.M....KlA1ppel M. (2009)
    10. C4ST-1/CHST11-controlled chondroitin sulfation interfe res with oncogenic HRAS signaling in Costello syndrome. (PubMed id 22317973)1 Kluppel M....Hinek A. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 50515 HGNC: 17422 AceView: CHST11 Ensembl:ENSG00000171310 euGenes: HUgn50515
    ECgene: CHST11 Kegg: 50515 H-InvDB: CHST11

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CHST11 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CHST11 gene:
    Search GeneIP for patents involving CHST11

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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