Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CHRNB4 Gene

protein-coding   GIFtS: 62
GCID: GC15M078916

cholinergic receptor, nicotinic, beta 4 (neuronal)

(Previous names: cholinergic receptor, nicotinic, beta polypeptide 4 )
 Explore 5 diseases affiliated with
CHRNB4 via our new
 Human Malady Compendium 
Biological research products
for CHRNB4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cholinergic Receptor, Nicotinic, Beta 4 (Neuronal)1 2
Cholinergic Receptor, Nicotinic, Beta Polypeptide 41 2
Acetylcholine Receptor, Nicotinic, Beta 4 (Neuronal)2
Neuronal Acetylcholine Receptor Subunit Beta-42
Neuronal Nicotinic Receptor Beta 4 Subunit2

External Ids:    HGNC: 19641   Entrez Gene: 11432   Ensembl: ENSG000001179717   OMIM: 1185095   UniProtKB: P309263   

Export aliases for CHRNB4 gene to outside databases

Previous GC identifers: GC15P074970 GC15M072006 GC15M076492 GC15M076632 GC15M076703 GC15M055674


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: ACHB4_HUMAN, P30926
Function: After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all
subunits and leads to opening of an ion-conducting channel across the plasma membrane

summary for CHRNB4:
Nicotinic receptors (nAChRs) are ligand-gated ion channels that modulate cell membrane potentials. Each
receptor is composed of pentameric combinations of subunits (alpha1-10, beta1-4, delta, epsilon and gamma).
Nicotinic receptors are generally divided into three functional classes: muscle subunits (alpha1, beta1,
delta, epsilon, gamma), standard neuronal subunits (alpha1-6 and beta2-4) that form in pairwise alphabeta
combinations, and subunits (alpha7-9) that can form homomeric nAChRs. Neuronal nicotinic receptors are found
in the central nervous system and in autonomic ganglia where they regulate processes such as transmitter
release, cell excitability and neuronal integration. Nicotinic receptors located at the neuromuscular
junctions of somatic muscles are responsible for muscular contraction.

Gene Wiki entry for CHRNB4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_010194.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CHRNB4 gene promoter:
         AhR   Max1   NF-E2 p45   Tal-1beta   Arnt   HNF-1A   HNF-1   NF-E2   ITF-2   c-Myc   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCHRNB4 promoter sequence
   Search SABiosciences Chromatin IP Primers for CHRNB4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHRNB4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q24   Ensembl cytogenetic band:  15q25.1   HGNC cytogenetic band: 15q24

CHRNB4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CHRNB4 gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15M078916:  view genomic region     (about GC identifiers)

Start:
78,916,461 bp from pter      End:
79,012,628 bp from pter
Size:
96,168 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ACHB4_HUMAN, P30926 (See protein sequence)
Recommended Name: Neuronal acetylcholine receptor subunit beta-4 precursor  
Size: 498 amino acids; 56380 Da
Subunit: Neuronal AChR is composed of two different types of subunits: alpha and beta. Beta-4 subunit can be combined
to alpha-2, alpha-3 or alpha-4 to give rise to functional receptors. Interacts with RIC3; which is required for proper
folding and assembly
Subcellular location: Cell junction, synapse, postsynaptic cell membrane; Multi-pass membrane protein. Cell membrane;
Multi-pass membrane protein
1 PDB 3D structure from and Proteopedia for CHRNB4:
2ASG (3D)    
Secondary accessions: Q16607 Q4VBA5 Q8WXC8 Q9BQR4

Explore the universe of human proteins at neXtProt for CHRNB4: NX_P30926

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P30926

  • CHRNB4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_000741.1  NP_001243496.1  

    ENSEMBL proteins: 
     ENSP00000261751   ENSP00000416386   ENSP00000457404   ENSP00000453442  
    Reactome Protein details: P30926
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: CHRNB4
    OriGene Custom Protein Services for CHRNB4 
    GenScript Custom Purified and Recombinant Proteins Services for CHRNB4
    Novus Biologicals CHRNB4 Protein
    Novus Biologicals CHRNB4 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IC11742001
    GO:0005892acetylcholine-gated channel complex TAS11742001
    GO:0016021integral to membrane NAS8906617
    GO:0019717synaptosome ----


    CHRNB4 for ontologies           About GeneDecksing



    CHRNB4 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for CHRNB4 
    GenScript Custom Superior Antibodies Services for CHRNB4
    Novus Biologicals CHRNB4 Antibodies
    Search for Antibodies for CHRNB4 at Abcam  
    Browse Antibodies at Uscn
    Search ThermoFisher Antibodies for CHRNB4

    Assay Products for CHRNB4: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for CHRNB4
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CHRNB4 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR002394 Nicotinic_acetylcholine_rcpt
     IPR018000 Neurotransmitter_ion_chnl_CS
     IPR006201 Neur_channel
     IPR006202 Neur_chan_lig-bd
     IPR006029 Neurotrans-gated_channel_TM

    Graphical View of Domain Structure for InterPro Entry P30926

    ProtoNet protein and cluster: P30926

    2 Blocks protein families:
    IPB002394 Nicotinic acetylcholine receptor signature
    IPB006201 Neurotransmitter-gated ion-channel


    UniProtKB/Swiss-Prot: ACHB4_HUMAN, P30926
    Similarity: Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily.
    Beta-4/CHRNB4 sub-subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: ACHB4_HUMAN, P30926
    Function: After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all
    subunits and leads to opening of an ion-conducting channel across the plasma membrane

         Genatlas biochemistry entry for CHRNB4:
    cholinergic receptor,nicotinic,beta 4 polypeptide,neuronal

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CHRNB4
    1 QIAGEN miScript miRNA Assays for microRNA that regulate CHRNB4:
    hsa-miR-1252
    SwitchGear 3'UTR luciferase reporter plasmidCHRNB4 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB4 (see all 7)
    OriGene shRNA RFP: CHRNB4
    OriGene siRNA: CHRNB4
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB4

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for CHRNB4

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4 (see all 3)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CHRNB4 (NM_000750)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CHRNB4
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB4 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for CHRNB4
    Search LifeMap BioReagents cell lines for CHRNB4

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB4

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity ----
    GO:0004889acetylcholine-activated cation-selective channel activity TAS11742001
    GO:0005230extracellular ligand-gated ion channel activity ----
    GO:0015276ligand-gated ion channel activity TAS--
    GO:0015464acetylcholine receptor activity IDA8906617


    CHRNB4 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for CHRNB4:
     Synthetic lethal with Ras 

    Animal Models:
         Mouse knock-out Chrnb4tm1Mdb for CHRNB4
         13 MGI mutant phenotypes (inferred from 1 allele(MGI details for Chrnb4):
     behavior/neurological  craniofacial  digestive/alimentary  growth/size  hearing/vestibular/ear 
     homeostasis/metabolism  immune system  integument  mortality/aging  muscle 
     nervous system  renal/urinary system  vision/eye 

    CHRNB4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Presynaptic nicotinic acetylcholine receptors
    8/9 pathways (see all 9)
    Presynaptic nicotinic acetylcholine receptors1.00
    Highly calcium permeable postsynaptic nicotinic acetylcholine receptors0.64
    Activation of Nicotinic Acetylcholine Receptors0.86
    Highly sodium permeable acetylcholine nicotinic receptors0.58
    Postsynaptic nicotinic acetylcholine receptors0.86
    Nicotine Pathway (Chromaffin Cell), Pharmacodynamics0.14
    Acetylcholine Binding And Downstream Events0.86
    Nicotine Activity on Chromaffin Cells0.14
    2Transmission across Chemical Synapses
    Transmission across Chemical Synapses1.00
    Neuronal System0.67
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell0.72
    3Sympathetic Nerve Pathway (Neuroeffector Junction)
    Sympathetic Nerve Pathway (Neuroeffector Junction)1.00
    4Calcium channels
    Calcium channels1.00
    5SIDS Susceptibility Pathways
    SIDS Susceptibility Pathways1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for CHRNB4
        Calcium channels

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for CHRNB4
        eNOS Signaling

    2 BioSystems Pathways for CHRNB4 
        SIDS Susceptibility Pathways
    Nicotine Activity on Chromaffin Cells

    5/10        Reactome Pathways for CHRNB4 (see all 10)
        Activation of Nicotinic Acetylcholine Receptors
    Transmission across Chemical Synapses
    Acetylcholine Binding And Downstream Events
    Highly calcium permeable nicotinic acetylcholine receptors
    Highly calcium permeable postsynaptic nicotinic acetylcholine receptors

    3 PharmGKB Pathways for CHRNB4
        Nicotine Pathway (Chromaffin Cell), Pharmacodynamics
    Sympathetic Nerve Pathway (Neuroeffector Junction)
    Sympathetic Nerve Pathway (Pre- and Post- Ganglionic Junction)

    2         Kegg Pathways  (Kegg details for CHRNB4):
        Neuroactive ligand-receptor interaction
    Cholinergic synapse


    CHRNB4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CHRNB4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 17)

    5/17 Interacting proteins for CHRNB4 (P309263 ENSP000002617514) via UniProtKB, MINT, STRING, and/or I2D (see all 17)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CHRNA2Q158223, ENSP000002401324I2D: score=2 STRING: ENSP00000240132
    CHRNA3P322973, ENSP000003156024I2D: score=1 STRING: ENSP00000315602
    CHRNA4P436813, ENSP000003592854I2D: score=1 STRING: ENSP00000359285
    CHRNA5P305323, ENSP000002995654I2D: score=1 STRING: ENSP00000299565
    UBQLN1Q9UMX03, ENSP000003655764I2D: score=1 STRING: ENSP00000365576
    About this table

    Gene Ontology (GO): 5/13 biological process terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001508regulation of action potential IEA--
    GO:0006811ion transport TAS8906617
    GO:0006939smooth muscle contraction IEA--
    GO:0006940regulation of smooth muscle contraction IEA--
    GO:0007165signal transduction IDA8906617


    CHRNB4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for CHRNB4 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    Mecamylamine hydrochlorideNon-competitive nicotinic receptor antagonist[826-39-1]
    alpha-Conotoxin AuIBSelective alpha3beta4 nAChR antagonist[216299-21-7]
    (±)-EpibatidineVery potent nicotinic agonist[140111-52-0]
    (±)-Anatoxin A fumarateNicotinic agonist[64285-06-9]

    4 DrugBank Compounds for CHRNB4    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Galantamine(-)-Galanthamine (see all 3)357-70-0targetallosteric modulator12137632 11129124 12481195 20480924 12177686 10971048
    NicotineL-Nicotine (see all 2)54-11-5targetagonist19560048 20081230 20400469 11006350
    Levomethadyl Acetate1-alpha-acetylmethadol (see all 9)1477-40-3targetother/unknown11561100
    PentoliniumPentolinium tartrate (see all 3)52-62-0targetantagonist7761270

    Search CenterWatch for drugs/clinical trials and news about CHRNB4 / ACHB4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CHRNB4 gene (2 alternative transcripts): 
    NM_000750.3  NM_001256567.1  

    Unigene Cluster for CHRNB4:

    Cholinergic receptor, nicotinic, beta 4 (neuronal)
    Hs.624178  [show with all ESTs]
    Unigene Representative Sequence: U48861
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000261751(uc002bed.1 uc002bee.1) ENST00000412074 ENST00000559849(uc010blh.1)
    ENST00000560511

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CHRNB4
    1 QIAGEN miScript miRNA Assays for microRNA that regulate CHRNB4:
    hsa-miR-1252
    SwitchGear 3'UTR luciferase reporter plasmidCHRNB4 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB4 (see all 7)
    OriGene shRNA RFP: CHRNB4
    OriGene siRNA: CHRNB4
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB4
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4 (see all 3)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CHRNB4 (NM_000750)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CHRNB4
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB4 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB4
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CHRNB4
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB4
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB4

    Additional cDNA sequence: 

    AK310443.1 BC096080.1 BC096081.1 BC096082.1 BC096083.1 U48861.1 U62439.1 X68275.1 
    Y08416.1 

    3 DOTS entries:

    DT.108533  DT.100810895  DT.121050497 

    23 AceView cDNA sequences:

    CR617765 AA909339 U62439 Y08416 BX374818 BX425453 NM_000750 BX283993 
    BX353375 BX098202 U48861 BQ718501 BX348201 X68275 AI625439 BM557937 
    BX390125 BF311784 AA101302 AA905514 BG460158 CD691021 AI024204 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for CHRNB4    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7
    SP1:              -                 -                     
    SP2:              -                 -     -     -         
    SP3:              -                                       
    SP4:                                                      


    ECgene alternative splicing isoforms for CHRNB4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CHRNB4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCTCCAATCC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    CHRNB4 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Definitive endoderm-like cells (A scalable, suspensi...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See CHRNB4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CHRNB4

    SOURCE GeneReport for Unigene cluster: Hs.624178
        SABiosciences Custom PCR Arrays for CHRNB4
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB4
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CHRNB4
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB4
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB4
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for CHRNB4 gene from 4/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CHRNB41 cholinergic receptor, nicotinic, beta 4 (neuronal) 68.67(n)
    75.98(a)
      395613  NM_204819.1  NP_990150.1 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC5685661 neuronal acetylcholine receptor subunit beta-4-like 68.72(n)
    67.52(a)
      568566  XM_691901.2  XP_696993.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta nAcRalpha-96Aa3
    nAcRbeta-96A1
    nicotinic acetylcholine-activated
    cation-selective more3
    nicotinic Acetylcholine Receptor beta 96A1
    53(a)
    (best of 7)3
    53.76(n)1
    48.89(a)1
      429201  NM_079759.31  NP_524483.11 
    worm
    (Caenorhabditis elegans)
    Secernentea acr-23 nicotinic acetylcholine receptor subunit 45(a)
    (best of 16)
      X(6737955-6744405)   --


    ENSEMBL Gene Tree for CHRNB4 (if available)
    TreeFam Gene Tree for CHRNB4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CHRNB4 gene
    CHRNA52  CHRNA22  CHRNA12  CHRNA62  CHRNA72  CHRNE2  CHRNA42  CHRNA102  
    CHRNA92  CHRNB22  CHRNG2  CHRNA32  CHRFAM7A2  CHRNB12  CHRNB32  CHRND2  
    18 SIMAP similar genes for CHRNB4 using alignment to 5 protein entries:     ACHB4_HUMAN (see all proteins):
    CHRNB2    CHRNA5    CHRNA6    CHRNA3    CHRNA7-2    CHRNA2
    CHRNB3    CHRNA1    CHRNB1    CHRNG    CHRNA7    CHRNA10
    CHRND    CHRFAM7A    CHRNE    CHRNA4    CHRNA9    HTR3A

    CHRNB4 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/415 NCBI SNPs in CHRNB4 are shown (see all 415    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs116359551,2
    C,A,H,--78916157(+) taaaaG/Atcaat 2 -- ds50012Minor allele frequency- A:0.06NA 122
    rs1837461601,2
    --78916162(+) GTCAAC/TTTTAT 2 -- ds50010--------
    rs48870701,2
    C,F,H,--78916187(+) TAAAAT/CAGAAT 2 -- ds50019Minor allele frequency- C:0.36WA NA CSA EA 369
    rs1896363961,2
    --78916273(+) ATGTGC/TGAGGA 2 -- ds50010--------
    rs286802381,2
    C,F,H,--78916274(+) TGTGCG/AAGGAG 2 -- ds50018Minor allele frequency- A:0.08NS NA WA 778
    rs1817637541,2
    --78916342(+) AAAGTA/GACCAG 2 -- ds50010--------
    rs1845596571,2
    --78916352(+) GCACCA/GCAGTC 2 -- ds50010--------
    rs798453091,2
    C,--78916472(-) GCTCAA/GTAAAT 2 -- ds50012Minor allele frequency- G:0.10CSA WA 120
    rs1898435101,2
    --78916524(+) TACCAC/GGAATG 2 -- ds50010--------
    rs715328721,2
    C,--78916567(+) CACTC-/ATAGTG 2 -- ds50010--------

    HapMap Linkage Disequilibrium report for CHRNB4 (78916461 - 79012628 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CHRNB4: --
    Human Gene Mutation Database (HGMD): CHRNB4

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHRNB4
    DNA2.0 Custom Variant and Variant Library Synthesis for CHRNB4

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CHRNB4 for disorders           About GeneDecksing

    OMIM gene information: 118509    OMIM disorders: --

    5 diseases for CHRNB4:    About MalaCards
    neuronitis    lateral sclerosis    lung carcinoma    neuroblastoma
    carcinoma

    4 diseases from the University of Copenhagen DISEASES database for CHRNB4:
    Nicotine dependence     Cocaine dependence     Lung cancer     Alcohol dependence
    Human Genome Epidemiology (HuGE) Navigator: CHRNB4 (38 documents)

    Export disorders for CHRNB4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CHRNB4 gene, integrated from 9 sources (see all 103):
    (articles sorted by number of sources associating them with CHRNB4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Transcription factors NF-Y and Sp1 are important determinants of the promoter activity of the bovine and human neuronal nicotinic receptor beta 4 subunit genes. (PubMed id 11742001)1, 2, 9 Valor L.M.... Criado M. (2002)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Characterization of the human beta4 nAChR gene and polymorphisms in CHRNA3 and CHRNB4. (PubMed id 11450844)1, 2 Lev-Lehman E.... Beaudet A.L. (2001)
    4. 'Orphan' alpha6 nicotinic AChR subunit can form a functional heteromeric acetylcholine receptor. (PubMed id 9203638)1, 2 Gerzanich V.... Lindstrom J. (1997)
    5. Cloning and sequence of full-length cDNAs encoding the human neuronal nicotinic acetylcholine receptor (nAChR) subunits beta3 and beta4 and expression of seven nAChR subunits in the human neuroblastoma cell line SH-SY5Y and/or IMR-32. (PubMed id 9009220)1, 2 Groot Kormelink P.J. and Luyten W.H.M.L. (1997)
    6. Comparative structure of human neuronal alpha 2-alpha 7 and beta 2- beta 4 nicotinic acetylcholine receptor subunits and functional expression of the alpha 2, alpha 3, alpha 4, alpha 7, beta 2, and beta 4 subunits. (PubMed id 8906617)1, 2 Elliott K.J.... Harpold M.M. (1996)
    7. Neuronal-type nicotinic receptors in human neuroblastoma and small- cell lung carcinoma cell lines. (PubMed id 1330682)1, 2 Tarroni P....Clementi F. (1992)
    8. Mapping of multiple subunits of the neuronal nicotinic acetylcholine receptor to chromosome 15 in man and chromosome 9 in mouse. (PubMed id 2004777)1, 3 Eng C.M....Zoghbi H.Y. (1991)
    9. Chromosomal localization and physical linkage of the genes encoding the human alpha 3, alpha 5, and beta 4 neuronal nicotinic receptor subunits. (PubMed id 1572664)1, 9 Raimondi E....Clementi F. (1992)
    10. Rare missense variants of neuronal nicotinic acetylch oline receptor altering receptor function are associated with sporadic amyotrop hic lateral sclerosis. (PubMed id 19628475)1, 9 Sabatelli M....Zollino M. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 1143 HGNC: 1964 AceView: CHRNB4 Ensembl:ENSG00000117971 euGenes: HUgn1143
    ECgene: CHRNB4 Kegg: 1143 H-InvDB: CHRNB4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CHRNB4 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CHRNB4 gene:
    Search GeneIP for patents involving CHRNB4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for CHRNB4  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB4   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB4  
     OriGene Protein Over-expression Lysate for CHRNB4   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for CHRNB4   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB4  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for CHRNB4   OriGene Custom Protein Services for CHRNB4  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CHRNB4
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHRNB4
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHRNB4
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB4
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB4
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB4
     GenScript Custom Purified and Recombinant Proteins Services for CHRNB4 GenScript cDNA clones with any tag delivered in your preferred vector for CHRNB4
     GenScript Custom Assay Services for CHRNB4 GenScript Custom Superior Antibodies Services for CHRNB4
     GenScript Custom overexpressing Cell Line Services for CHRNB4 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in CHRNB4 promoter
     Search Chromatin IP Primers for CHRNB4
     RT2 qPCR Primer Assay in human, mouse, rat CHRNB4
     GNC Network for CHRNB4
     SABiosciences PCR Arrays including human, mouse, rat CHRNB4
     Tocris compounds for CHRNB4
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     CHRNB4 antibodies
     CHRNB4 proteins
     CHRNB4 lysates
     Search for Antibodies for CHRNB4 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for CHRNB4
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for CHRNB4
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB4
     SwitchGear 3'UTR luciferase reporter plasmids for CHRNB4
     SwitchGear Promoter luciferase reporter plasmids for CHRNB4
     Search ThermoFisher Antibodies for CHRNB4
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB4
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      CHRNB4 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4