Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CHRNB1 Gene

protein-coding   GIFtS: 64
GCID: GC17P007348

cholinergic receptor, nicotinic, beta 1 (muscle)

(Previous names: cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)...)
(Previous symbol: CHRNB)
 Explore 14 diseases affiliated with
CHRNB1 via our new
 Human Malady Compendium 
Biological research products
for CHRNB1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cholinergic Receptor, Nicotinic, Beta 1 (Muscle)1 2     CMS2A2 5
CHRNB1 2 3     SCCMS2 5
ACHRB2 3 5     Acetylcholine Receptor Subunit Beta2
Cholinergic Receptor, Nicotinic, Beta Polypeptide 1 (Muscle)1 2     Acetylcholine Receptor, Nicotinic, Beta 1 (Muscle)2
CMS1D2 5     

External Ids:    HGNC: 19611   Entrez Gene: 11402   Ensembl: ENSG000001701757   OMIM: 1007105   UniProtKB: P112303   

Export aliases for CHRNB1 gene to outside databases

Previous GC identifers: GC17M007754 GC17P008078 GC17P007292 GC17P007548 GC17P007289


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CHRNB1:
The muscle acetylcholine receptor is composed of five subunits: two alpha subunits and one beta, one gamma, and one
delta subunit. This gene encodes the beta subunit of the acetylcholine receptor. The acetylcholine receptor changes
conformation upon acetylcholine binding leading to the opening of an ion-conducting channel across the plasma
membrane. Mutations in this gene are associated with slow-channel congenital myasthenic syndrome. (provided by RefSeq,
Jul 2008)

UniProtKB/Swiss-Prot: ACHB_HUMAN, P11230
Function: After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all
subunits and leads to opening of an ion-conducting channel across the plasma membrane

summary for CHRNB1:
Nicotinic receptors (nAChRs) are ligand-gated ion channels that modulate cell membrane potentials. Each
receptor is composed of pentameric combinations of subunits (alpha1-10, beta1-4, delta, epsilon and gamma).
Nicotinic receptors are generally divided into three functional classes: muscle subunits (alpha1, beta1,
delta, epsilon, gamma), standard neuronal subunits (alpha1-6 and beta2-4) that form in pairwise alphabeta
combinations, and subunits (alpha7-9) that can form homomeric nAChRs. Neuronal nicotinic receptors are found
in the central nervous system and in autonomic ganglia where they regulate processes such as transmitter
release, cell excitability and neuronal integration. Nicotinic receptors located at the neuromuscular
junctions of somatic muscles are responsible for muscular contraction.

Gene Wiki entry for CHRNB1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010718.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CHRNB1 gene promoter:
         SRF   GATA-3   Pax-5   CUTL1   POU3F2   C/EBPalpha   GATA-1   GATA-2   PPAR-gamma2   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for CHRNB1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHRNB1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.1   Ensembl cytogenetic band:  17p13.1   HGNC cytogenetic band: 17p13.1

CHRNB1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CHRNB1 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P007348:  view genomic region     (about GC identifiers)

Start:
7,348,380 bp from pter      End:
7,361,026 bp from pter
Size:
12,647 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ACHB_HUMAN, P11230 (See protein sequence)
Recommended Name: Acetylcholine receptor subunit beta precursor  
Size: 501 amino acids; 56698 Da
Subunit: Pentamer of two alpha chains, and one each of the beta, delta, and gamma (in immature muscle) or epsilon (in
mature muscle) chains
Subcellular location: Cell junction, synapse, postsynaptic cell membrane; Multi-pass membrane protein. Cell membrane;
Multi-pass membrane protein
Secondary accessions: Q96FB8

Explore the universe of human proteins at neXtProt for CHRNB1: NX_P11230

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P11230

  • CHRNB1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_000738.2  
    ENSEMBL proteins: 
     ENSP00000304290   ENSP00000461402   ENSP00000460648   ENSP00000439209   ENSP00000459092  
     ENSP00000461751  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for CHRNB1 
    GenScript Custom Purified and Recombinant Proteins Services for CHRNB1
    Novus Biologicals CHRNB1 Protein
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane ----
    GO:0005887integral to plasma membrane NAS8872460
    GO:0005892acetylcholine-gated channel complex IMP8872460
    GO:0016021integral to membrane ----
    GO:0030054cell junction IEA--


    CHRNB1 for ontologies           About GeneDecksing



    CHRNB1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies (see all 3): CHRNB1
    OriGene Custom Antibody Services for CHRNB1 
    GenScript Custom Superior Antibodies Services for CHRNB1
    Novus Biologicals CHRNB1 Antibodies
    Abcam antibodies for CHRNB1 
    Browse Antibodies at Uscn
    ThermoFisher Antibodies for CHRNB1

    Assay Products for CHRNB1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for CHRNB1
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CHRNB1 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR002394 Nicotinic_acetylcholine_rcpt
     IPR018000 Neurotransmitter_ion_chnl_CS
     IPR006201 Neur_channel
     IPR006202 Neur_chan_lig-bd
     IPR006029 Neurotrans-gated_channel_TM

    Graphical View of Domain Structure for InterPro Entry P11230

    ProtoNet protein and cluster: P11230

    2 Blocks protein families:
    IPB002394 Nicotinic acetylcholine receptor signature
    IPB006201 Neurotransmitter-gated ion-channel


    UniProtKB/Swiss-Prot: ACHB_HUMAN, P11230
    Similarity: Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily.
    Beta-1/CHRNB1 sub-subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: ACHB_HUMAN, P11230
    Function: After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all
    subunits and leads to opening of an ion-conducting channel across the plasma membrane

         Genatlas biochemistry entry for CHRNB1:
    cholinergic receptor,nicotinic,beta 1 polypeptide,muscle

    miRNA
    Products:
        
    miRTarBase miRNAs that target CHRNB1:
    hsa-mir-98 (MIRT004951)

    OriGene 3'-UTR Clone: CHRNB1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CHRNB1
    5 QIAGEN miScript miRNA Assays for microRNAs that regulate CHRNB1:
    hsa-miR-145* hsa-miR-7-1* hsa-miR-7-2* hsa-miR-3065-5p hsa-miR-138-2*
    SwitchGear 3'UTR luciferase reporter plasmidCHRNB1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB1 (see all 6)
    OriGene siRNA: CHRNB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for CHRNB1

    Clone
    Products:
         
    EMD Millipore Clones for the Expression of CHRNB1
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CHRNB1 (NM_000747)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CHRNB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for CHRNB1
    Search LifeMap BioReagents cell lines for CHRNB1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB1

    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity ----
    GO:0004889contributes to acetylcholine-activated cation-selective channel activity ISS--
    GO:0005515protein binding ----
    GO:0015267channel activity IMP8872460
    GO:0015276ligand-gated ion channel activity ISS--


    CHRNB1 for ontologies           About GeneDecksing


    Animal Models:
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Chrnb1):
     nervous system 

    CHRNB1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Calcium channels
    Calcium channels1.00
    2AMPK Enzyme Complex Pathway
    AMPK Enzyme Complex Pathway1.00
    3Nanog in Mammalian ESC Pluripotency
    eNOS Signaling0.48
    4Class A/1 (Rhodopsin-like receptors)
    Neuroactive ligand-receptor interaction0.38

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for CHRNB1
        Calcium channels

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CHRNB1
        AMPK Enzyme Complex Pathway
    eNOS Signaling


    1         Kegg Pathway  (Kegg details for CHRNB1):
        Neuroactive ligand-receptor interaction


    CHRNB1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CHRNB1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 16)

    5/17 Interacting proteins for CHRNB1 (P112303 ENSP000003042904) via UniProtKB, MINT, STRING, and/or I2D (see all 17)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RAPSNQ137023, ENSP000002988544I2D: score=1 STRING: ENSP00000298854
    COPS6Q7L5N13I2D: score=3 
    CHRNA2ENSP000002401324STRING: ENSP00000240132
    CHRNA3ENSP000003156024STRING: ENSP00000315602
    CHRNA4ENSP000003592854STRING: ENSP00000359285
    About this table

    Gene Ontology (GO): 5/11 biological process terms (GO ID links to tree view) (see all 11):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001941postsynaptic membrane organization IMP8651643
    GO:0006811ion transport ----
    GO:0006812cation transport IMP8872460
    GO:0006936muscle contraction IMP8651643
    GO:0007165signal transduction IMP8872460


    CHRNB1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for CHRNB1 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    alpha-Conotoxin EIalpha1beta1deltagamma selective nAChR antagonist[170663-33-9]
    Mecamylamine hydrochlorideNon-competitive nicotinic receptor antagonist[826-39-1]
    (±)-EpibatidineVery potent nicotinic agonist[140111-52-0]
    (±)-Anatoxin A fumarateNicotinic agonist[64285-06-9]

    1 DrugBank Compound for CHRNB1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Galantamine(-)-Galanthamine (see all 3)357-70-0targetallosteric modulator12137632 11129124 12481195 20480924 12177686 10971048

    Search CenterWatch for drugs/clinical trials and news about CHRNB1 / ACHB 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CHRNB1 gene: 
    NM_000747.2  

    Unigene Cluster for CHRNB1:

    Cholinergic receptor, nicotinic, beta 1 (muscle)
    Hs.330386  [show with all ESTs]
    Unigene Representative Sequence: BC023553
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000306071(uc002ghb.3 uc010vty.2) ENST00000572857 ENST00000574054
    ENST00000570557 ENST00000536404 ENST00000576360 ENST00000573209(uc010vtz.1)
    ENST00000575379

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: CHRNB1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CHRNB1
    5 QIAGEN miScript miRNA Assays for microRNAs that regulate CHRNB1:
    hsa-miR-145* hsa-miR-7-1* hsa-miR-7-2* hsa-miR-3065-5p hsa-miR-138-2*
    SwitchGear 3'UTR luciferase reporter plasmidCHRNB1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB1 (see all 6)
    OriGene siRNA: CHRNB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CHRNB1 (NM_000747)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CHRNB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CHRNB1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB1

    Additional cDNA sequence: 

    AK298938.1 AK308106.1 BC011371.1 BC023553.2 X14830.1 

    7 DOTS entries:

    DT.92418355  DT.441400  DT.97780381  DT.406908  DT.97825028  DT.120899047  DT.95123454 

    24/73 AceView cDNA sequences (see all 73):

    BM680320 CD014139 AW273235 BC011371 AW407007 BG413434 NM_000747 BE350013 
    BQ548594 AW273177 BQ548884 BM724147 BU951875 BQ688060 BU663284 BG500518 
    CB992791 AW157173 BM459117 CB994947 AA503863 AU099979 BX110786 AA737129 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for CHRNB1 (see all 7)    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14a · 14b · 14c
    SP1:              -     -                                                                 -                           
    SP2:                                                  -     -     -                       -                           
    SP3:                    -                                                                                             
    SP4:                                                  -     -                                                         
    SP5:                                                                                                                  


    ECgene alternative splicing isoforms for CHRNB1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CHRNB1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTCGCTCAGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    CHRNB1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LimbZeugopodMesenchymal Condensate CellsBone, Cartilage
    BoneZeugopod Long BoneBone
    LimbAutopodLimb
    LimbZeugopodLimb
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See CHRNB1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CHRNB1

    SOURCE GeneReport for Unigene cluster: Hs.330386
        SABiosciences Expression via Pathway-Focused PCR Array including CHRNB1: 
              Hypertension in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CHRNB1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for CHRNB1 gene from 4/15 species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    African clawed frog
    (Xenopus laevis)
    Amphibia LOC3980482 muscle nicotinic acetylcholine receptor beta subunit 75.87(n)    U04618.1 
    zebrafish
    (Danio rerio)
    Actinopterygii chrnb11 cholinergic receptor, nicotinic, beta 1 (muscle) 61.34(n)
    62.26(a)
      100006941  XM_001341831.1  XP_001341867.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta nAcR&bgr;-64B3 nicotinic acetylcholine-activated
    cation-selective more
    39(a)   64B6   --
    worm
    (Caenorhabditis elegans)
    Secernentea lev-13 acetylcholine receptor 35(a)
    (best of 3)
      IV(13174445-13179316)   --


    ENSEMBL Gene Tree for CHRNB1 (if available)
    TreeFam Gene Tree for CHRNB1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CHRNB1 gene
    CHRNA52  CHRNA22  CHRNA12  CHRNA62  CHRNA72  CHRNE2  CHRNB42  CHRNA42  
    CHRNA102  CHRNA92  CHRNB22  CHRNG2  CHRNA32  CHRFAM7A2  CHRNB32  CHRND2  
    18/19 SIMAP similar genes for CHRNB1 using alignment to 7 protein entries:     ACHB_HUMAN (see all proteins) (see all similar genes):
    HTR3A    CHRNA6    CHRNA5    CHRNB4    CHRNA3    CHRND
    CHRNA7-2    CHRNA1    CHRNA4    HTR3E    CHRNA2    CHRFAM7A
    CHRNB3    CHRNE    CHRNA7    CHRNB2    CHRNA9    CHRNG

    CHRNB1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/302 NCBI SNPs in CHRNB1 are shown (see all 302    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1450803861,2
    C,--7346479(+) CCCTGA/GACTGG 2 -- us2k1 ut310--------
    rs2012259031,2
    --7346513(+) CCAGCC/TACCAC 2 -- us2k1 ut310--------
    rs41511331,2
    C,F,H,--7346739(+) ACAACC/GCCATG 1 -- us2k119Minor allele frequency- G:0.05NS NA WA CSA 980
    rs1893317611,2
    --7346762(+) ATGGCA/GCTGGG 2 -- ut31 us2k10--------
    rs1926849051,2
    --7346965(+) CAGGGC/TCACTT 2 -- ut31 us2k10--------
    rs1483224671,2
    --7346986(+) GCTCTC/GTGCTG 2 -- us2k1 ut310--------
    rs38296031,2
    C,F,A,H,--7347042(+) CTGTCC/ATTGAC 1 -- us2k135Minor allele frequency- A:0.45NS EA NA WA CSA 3540
    rs41511341,2
    C,F,A,H,--7347123(+) TGAACC/TGGAAC 2 -- us2k1 ut3121Minor allele frequency- T:0.33NS EA NA WA CSA 2406
    rs1414325401,2
    --7347124(+) GAACCA/GGAACC 2 -- us2k1 ut310--------
    rs1846628751,2
    --7347180(+) CAATTC/TTAGAG 2 -- ut31 us2k10--------

    HapMap Linkage Disequilibrium report for CHRNB1 (7348380 - 7361026 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CHRNB1: --
    Human Gene Mutation Database (HGMD): CHRNB1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHRNB1
    DNA2.0 Custom Variant and Variant Library Synthesis for CHRNB1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CHRNB1 for disorders           About GeneDecksing

    OMIM gene information: 100710   
    OMIM disorders: 601462  608931  
    UniProtKB/Swiss-Prot: ACHB_HUMAN, P11230
  • Defects in CHRNB1 are a cause of congenital myasthenic syndrome slow-channel type (SCCMS) [MIM:601462]. SCCMS
  • is the most common congenital myasthenic syndrome. Congenital myasthenic syndromes are characterized by muscle
    weakness affecting the axial and limb muscles (with hypotonia in early-onset forms), the ocular muscles (leading to
    ptosis and ophthalmoplegia), and the facial and bulbar musculature (affecting sucking and swallowing, and leading to
    dysphonia). The symptoms fluctuate and worsen with physical effort. SCCMS is caused by kinetic abnormalities of the
    AChR, resulting in prolonged endplate currents and prolonged AChR channel opening episodes
  • Defects in CHRNB1 are a cause of congenital myasthenic syndrome with acetylcholine receptor deficiency
  • (CMS-ACHRD) [MIM:608931]. CMS-ACHRD is a postsynaptic congenital myasthenic syndrome. Mutations underlying AChR
    deficiency cause a 'loss of function' and show recessive inheritance

    14 diseases for CHRNB1:    About MalaCards
    slow-channel congenital myasthenic syndrome    congenital myasthenic syndrome    myasthenic syndrome    autosomal dominant nocturnal frontal lobe epilepsy
    frontal lobe epilepsy    lymphangioma    cystic lymphangioma    nicotine dependence
    neuronitis    pterygium    ptosis    myasthenia
    hypotonia    lung cancer

    3 diseases from the University of Copenhagen DISEASES database for CHRNB1:
    Nicotine dependence     Neuropathy     Myopathy
    GeneTests: CHRNB1
    Congenital Myasthenic Syndromes

    Human Genome Epidemiology (HuGE) Navigator: CHRNB1 (8 documents)

    Export disorders for CHRNB1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CHRNB1 gene, integrated from 9 sources (see all 32):
    (articles sorted by number of sources associating them with CHRNB1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    2. Mutation causing congenital myasthenia reveals acetylcholine receptor beta/delta subunit interaction essential for assembly. (PubMed id 10562302)1, 2 Quiram P.A.... Engel A.G. (1999)
    3. A beta-subunit mutation in the acetylcholine receptor channel gate causes severe slow-channel syndrome. (PubMed id 8651643)1, 2 Gomez C.M.... Kuncl R.W. (1996)
    4. New mutations in acetylcholine receptor subunit genes reveal heterogeneity in the slow-channel congenital myasthenic syndrome. (PubMed id 8872460)1, 2 Engel A.G....Sine S.M. (1996)
    5. Nucleotide sequence of human muscle acetylcholine receptor beta- subunit. (PubMed id 2740233)1, 2 Beeson D.M.W.... Newsom-Davis J. (1989)
    6. Gene-based analysis suggests association of the nicotinic acetylcholine receptor beta1 subunit (CHRNB1) and M1 muscarinic acetylcholine receptor (CHRM1) with vulnerability for nicotine dependence. (PubMed id 16874522)1, 9 Lou X.Y....Li M.D. (2006)
    7. Association of single nucleotide polymorphisms of nico tinic acetylcholine receptor subunits with cervical neoplasia. (PubMed id 22406075)1 Calleja-Macias I....Bernard H.U. (2012)
    8. Multiple cholinergic nicotinic receptor genes affect nicotine dependence risk in African and European Americans. (PubMed id 20584212)1 Saccone N.L....Bierut L.J. (2010)
    9. Resequencing of nicotinic acetylcholine receptor gene s and association of common and rare variants with the FagerstrAPm test for nico tine dependence. (PubMed id 20736995)1 Wessel J....Bergen A.W. (2010)
    10. A large-scale candidate gene association study of age at menarche and age at natural menopause. (PubMed id 20734064)1 He C....Hunter D.J. (2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 1140 HGNC: 1961 AceView: CHRNB1 Ensembl:ENSG00000170175 euGenes: HUgn1140
    ECgene: CHRNB1 Kegg: 1140 H-InvDB: CHRNB1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CHRNB1 Pharmacogenomics, SNPs, Pathways
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/CHRNB1

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CHRNB1 gene:
    Search GeneIP for patents involving CHRNB1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse Purified and Recombinant Proteins at EMD Millipore
     Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     Browse Small Molecules at EMD Millipore
     EMD Millipore Clones for the Expression of CHRNB1
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for CHRNB1   Browse OriGene shRNA RFPs  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CHRNB1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CHRNB1  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for CHRNB1   OriGene 3'-UTR Clone for CHRNB1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CHRNB1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for CHRNB1   OriGene Custom Protein Services for CHRNB1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CHRNB1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHRNB1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHRNB1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CHRNB1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CHRNB1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CHRNB1
     GenScript Custom Purified and Recombinant Proteins Services for CHRNB1 GenScript cDNA clones with any tag delivered in your preferred vector for CHRNB1
     GenScript Custom Assay Services for CHRNB1 GenScript Custom Superior Antibodies Services for CHRNB1
     GenScript Custom overexpressing Cell Line Services for CHRNB1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in CHRNB1 promoter
     Search Chromatin IP Primers for CHRNB1
     RT2 qPCR Primer Assay in human, mouse, rat CHRNB1
     GNC Network for CHRNB1
     SABiosciences PCR Arrays including human, mouse, rat CHRNB1
     Tocris compounds for CHRNB1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     CHRNB1 antibodies
     CHRNB1 proteins
     Antibodies for CHRNB1
     See all of Abcam's Antibodies, Kits and Proteins for CHRNB1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for CHRNB1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRNB1
     SwitchGear 3'UTR luciferase reporter plasmids for CHRNB1
     Browse SwitchGear Promoter luciferase reporter plasmids for CHRNB1
     ThermoFisher Antibodies for CHRNB1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CHRNB1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      CHRNB1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4