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Aliases for CHRM3-AS2 Gene

Subcategory (RNA class) for CHRM3-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CHRM3-AS2 Gene

  • CHRM3 Antisense RNA 2 2 3 5
  • CHRM3 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for CHRM3-AS2 Gene

Previous GeneCards Identifiers for CHRM3-AS2 Gene

  • GC01M239869

Summaries for CHRM3-AS2 Gene

GeneCards Summary for CHRM3-AS2 Gene

CHRM3-AS2 (CHRM3 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CHRM3-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHRM3-AS2 Gene

Genomics for CHRM3-AS2 Gene

Regulatory Elements for CHRM3-AS2 Gene

Enhancers for CHRM3-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H239717 1.1 Ensembl ENCODE dbSUPER 15.2 +10.7 10676 5.3 GATA3 POLR2A MAX RCOR1 REST MYC TRIM28 GABPA CHRM3-AS2 CHRM3 GC01P239706
GH01H239856 0.7 ENCODE 4.8 -127.0 -127009 2.6 TBP SMARCC1 JUN MAX CEBPB EP300 MAFF ZNF274 JUND STAT3 CHRM3-AS2 CHRM3-AS1
GH01H239730 0.3 FANTOM5 0.7 -0.1 -118 0.3 CHRM3-AS2 CHRM3-AS1
GH01H239814 1 Ensembl ENCODE 0.2 -84.1 -84106 0.9 CTCF JUN MAX SIN3A FEZF1 RAD21 RFX5 SMC3 SMARCC2 RCOR1 CHRM3 CHRM3-AS2 CHRM3-AS1
GH01H239815 1 Ensembl ENCODE 0.2 -86.3 -86295 2.1 TBP PKNOX1 JUN MAX ZBTB40 TEAD3 RCOR1 FOS DEK CHD2 CHRM3-AS1 CHRM3-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CHRM3-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CHRM3-AS2 Gene

Genomic Locations for CHRM3-AS2 Gene
27,085 bases
Minus strand

Genomic View for CHRM3-AS2 Gene

Genes around CHRM3-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHRM3-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHRM3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHRM3-AS2 Gene

Proteins for CHRM3-AS2 Gene

Post-translational modifications for CHRM3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHRM3-AS2 Gene

Domains & Families for CHRM3-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHRM3-AS2 Gene

Function for CHRM3-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHRM3-AS2 Gene

Localization for CHRM3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHRM3-AS2 Gene

Pathways & Interactions for CHRM3-AS2 Gene

SuperPathways for CHRM3-AS2 Gene

No Data Available

Interacting Proteins for CHRM3-AS2 Gene

Gene Ontology (GO) - Biological Process for CHRM3-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for CHRM3-AS2 Gene

Drugs & Compounds for CHRM3-AS2 Gene

No Compound Related Data Available

Transcripts for CHRM3-AS2 Gene

mRNA/cDNA for CHRM3-AS2 Gene

(4) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CHRM3-AS2 Gene

CHRM3 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CHRM3-AS2 Gene

No ASD Table

Relevant External Links for CHRM3-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CHRM3-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHRM3-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for CHRM3-AS2 Gene

This gene is overexpressed in Testis (x12.1), Small Intestine - Terminal Ileum (x8.1), Whole Blood (x7.8), and Spleen (x5.7).

SOURCE GeneReport for Unigene cluster for CHRM3-AS2 Gene:

genes like me logo Genes that share expression patterns with CHRM3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHRM3-AS2 Gene

Orthologs for CHRM3-AS2 Gene

Evolution for CHRM3-AS2 Gene

Gene Tree for CHRM3-AS2 (if available)
Gene Tree for CHRM3-AS2 (if available)

No data available for Orthologs for CHRM3-AS2 Gene

Paralogs for CHRM3-AS2 Gene

No data available for Paralogs for CHRM3-AS2 Gene

Variants for CHRM3-AS2 Gene

Sequence variations from dbSNP and Humsavar for CHRM3-AS2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000489435 -- 239,717,945(+) AGTTT(C/T)CTATT intron-variant
rs1000788612 -- 239,712,353(+) GGTCA(G/T)AAAAA intron-variant
rs1000938593 -- 239,719,254(+) GACTG(A/G)TGTTA intron-variant, upstream-variant-2KB
rs1001045387 -- 239,711,744(+) AAGAA(C/T)AGGGG intron-variant
rs1001370075 -- 239,718,802(+) TCCTC(A/G)TGAGC intron-variant, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for CHRM3-AS2 Gene

Variant ID Type Subtype PubMed ID
esv2759009 CNV gain 17122850
nsv506986 OTHER sequence alteration 20534489
nsv549435 CNV gain 21841781
nsv954002 CNV duplication 24416366

Relevant External Links for CHRM3-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CHRM3-AS2 Gene

Disorders for CHRM3-AS2 Gene

Relevant External Links for CHRM3-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CHRM3-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CHRM3-AS2 Gene

Publications for CHRM3-AS2 Gene

No publications were found for CHRM3-AS2 Gene.

Products for CHRM3-AS2 Gene

Sources for CHRM3-AS2 Gene

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