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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CHRM1 Gene

protein-coding   GIFtS: 65
GCID: GC11M062692

cholinergic receptor, muscarinic 1

 Explore 37 diseases affiliated with
CHRM1 via our new
 Human Malady Compendium 
Biological research products
for CHRM1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cholinergic Receptor, Muscarinic 11 2
HM12
M12
M1R2
Acetylcholine Receptor, Muscarinic 12
Muscarinic Acetylcholine Receptor M12

External Ids:    HGNC: 19501   Entrez Gene: 11282   Ensembl: ENSG000001685397   OMIM: 1185105   UniProtKB: P112293   

Export aliases for CHRM1 gene to outside databases

Previous GC identifers: GC11M065188 GC11M064251 GC11M062927 GC11M062452 GC11M062453 GC11M062432 GC11M062677 GC11M059005


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CHRM1:
The muscarinic cholinergic receptors belong to a larger family of G protein-coupled receptors. The functional diversity
of these receptors is defined by the binding of acetylcholine and includes cellular responses such as adenylate
cyclase inhibition, phosphoinositide degeneration, and potassium channel mediation. Muscarinic receptors influence
many effects of acetylcholine in the central and peripheral nervous system. The muscarinic cholinergic receptor 1 is
involved in mediation of vagally-induced bronchoconstriction and in the acid secretion of the gastrointestinal tract.
The gene encoding this receptor is localized to 11q13. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: ACM1_HUMAN, P11229
Function: The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate
cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. Primary
transducing effect is Pi turnover

summary for CHRM1:
Muscarinic receptors are widely distributed throughout the body and control distinct functions according to
location and subtype (M1, M2, M3, M4, M5). They are predominantly expressed in the parasympathetic nervous
system where they exert both inhibitory and excitatory effects. Muscarinic receptor agonists and antagonists
could prove useful in the research and treatment of a wide range of central nervous system diseases
including Alzheimer's and Parkinson's.

Gene Wiki entry for CHRM1 (Muscarinic acetylcholine receptor M1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_167190.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CHRM1 gene promoter:
         NRSF form 1   c-Myb   MyoD   NRSF form 2   NF-kappaB1   NF-kappaB   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCHRM1 promoter sequence
   Search SABiosciences Chromatin IP Primers for CHRM1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHRM1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q13   Ensembl cytogenetic band:  11q12.3   HGNC cytogenetic band: 11q12-q13

CHRM1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CHRM1 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11M062692:  view genomic region     (about GC identifiers)

Start:
62,676,151 bp from pter      End:
62,689,279 bp from pter
Size:
13,129 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ACM1_HUMAN, P11229 (See protein sequence)
Recommended Name: Muscarinic acetylcholine receptor M1  
Size: 460 amino acids; 51421 Da
Subunit: Interacts with GPRASP2
Subcellular location: Cell membrane; Multi-pass membrane protein. Cell junction, synapse, postsynaptic cell membrane;
Multi-pass membrane protein

Explore the universe of human proteins at neXtProt for CHRM1: NX_P11229

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P11229

  • CHRM1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_000729.2  
    ENSEMBL proteins: 
     ENSP00000306490   ENSP00000441188   ENSP00000444482  
    Reactome Protein details: P11229
    Human Recombinant Protein Products: 
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for CHRM1

    Gene Ontology (GO): 5/11 cellular component terms (GO ID links to tree view) (see all 11):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005624membrane fraction ----
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS8508928
    GO:0014069postsynaptic density IEA--
    GO:0016020membrane TAS7925360


    CHRM1 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for CHRM1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CHRM1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR017452 GPCR_Rhodpsn_7TM
     IPR002228 Musac_M1_rcpt
     IPR000995 Musac_rcpt
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry P11229

    ProtoNet protein and cluster: P11229

    2 Blocks protein families:
    IPB000995 Muscarinic acetylcholine receptor signature
    IPB002228 Muscarinic M1 receptor signature


    UniProtKB/Swiss-Prot: ACM1_HUMAN, P11229
    Similarity: Belongs to the G-protein coupled receptor 1 family. Muscarinic acetylcholine receptor subfamily. CHRM1
    sub-subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: ACM1_HUMAN, P11229
    Function: The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate
    cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. Primary
    transducing effect is Pi turnover

         Genatlas biochemistry entry for CHRM1:
    cholinergic receptor,muscarinic 1,G protein coupled receptor superfamily

    miRNA
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    8/30 QIAGEN miScript miRNA Assays for microRNAs that regulate CHRM1 (see all 30):
    hsa-miR-4254 hsa-miR-1321 hsa-miR-3135 hsa-miR-330-5p hsa-miR-513a-5p hsa-miR-1260b hsa-miR-3133 hsa-miR-3605-5p
    SwitchGear 3'UTR luciferase reporter plasmidCHRM1 3' UTR sequence
    Inhib. RNA
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRM1

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004435phosphatidylinositol phospholipase C activity TAS9614217
    GO:0008144drug binding IEA--
    GO:0016907G-protein coupled acetylcholine receptor activity IEA--


    CHRM1 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for CHRM1:
     Decreased influenza A/WSN/33 r  Decreased viability 

    Animal Models:
         Mouse knock-outs for CHRM1: Chrm1tm2.1Stl Chrm1tm1Stl Chrm1tm1Kano Chrm1tm1Jwe Chrm1tm1Nmn
         8 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Chrm1):
     behavior/neurological  digestive/alimentary  endocrine/exocrine gland  hearing/vestibular/ear  homeostasis/metabolism 
     immune system  nervous system  respiratory system 

    CHRM1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    GPCRs, Class A Rhodopsin-like0.41
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    3G alpha (q) signalling events
    G alpha (q) signalling events1.00
    Gastrin-CREB signalling pathway via PKC and MAPK0.90
    4Regulation of Actin Cytoskeleton
    Regulation of Actin Cytoskeleton1.00
    Regulation of actin cytoskeleton0.58
    5Monoamine GPCRs
    Monoamine GPCRs1.00
    Amine ligand-binding receptors0.79

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    4 BioSystems Pathways for CHRM1 
        Calcium Regulation in the Cardiac Cell
    Regulation of Actin Cytoskeleton
    GPCRs, Class A Rhodopsin-like
    Monoamine GPCRs

    5/9        Reactome Pathways for CHRM1 (see all 9)
        GPCR downstream signaling
    Gastrin-CREB signalling pathway via PKC and MAPK
    Signaling by GPCR
    GPCR ligand binding
    Class A/1 (Rhodopsin-like receptors)


    4         Kegg Pathways  (Kegg details for CHRM1):
        Calcium signaling pathway
    Neuroactive ligand-receptor interaction
    Cholinergic synapse
    Regulation of actin cytoskeleton


    CHRM1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CHRM1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/134 Interacting proteins for CHRM1 (P112292, 3 ENSP000003064904) via UniProtKB, MINT, STRING, and/or I2D (see all 134)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    GPRASP1Q5JY773, ENSP000003551464I2D: score=3 STRING: ENSP00000355146
    GPRASP2Q96D093, ENSP000003390574I2D: score=3 STRING: ENSP00000339057
    GNAI2P048993, ENSP000003129994I2D: score=1 STRING: ENSP00000312999
    AKAP5P245883I2D: score=1 
    SNX1Q135963I2D: score=1 
    About this table

    Gene Ontology (GO): 5/12 biological process terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006464cellular protein modification process TAS1411529
    GO:0007165signal transduction TAS9614217
    GO:0007186G-protein coupled receptor signaling pathway TAS7925360
    GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway TAS9603968
    GO:0007207phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway TAS8139539


    CHRM1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CHRM1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Enzo Life Sciences drugs & compounds for CHRM1

    Compounds for CHRM1 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    McN-A 343Selective M1 muscarinic agonist[55-45-8]
    Xanomeline oxalateFunctionally selective M1 agonist[141064-23-5]
    Cevimeline hydrochlorideSelective M1 agonist[107220-28-0]
    Oxotremorine sesquifumarateMuscarinic agonist[17360-35-9]
    Pirenzepine dihydrochlorideSelective M1 muscarinic antagonist[28797-61-7]

    3 HMDB Compounds for CHRM1    About this table
    CompoundSynonyms CAS #PubMed Ids
    DoxylamineAlsadorm (see all 8)562-10-7--
    OlanzapineLanzac (see all 5)132539-06-1--
    Scopolamine(+)-Hyoscine (see all 38)51-34-3--

    10/73 DrugBank Compounds for CHRM1 (see all 73)    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    TrihexyphenidylTrihexifenidilo [INN-Spanish] (see all 9)144-11-6targetantagonist2432979 17139284 1994002 11752352 17016423 3208836 18685832 17631384
    BiperidenBeperiden (see all 9)514-65-8targetantagonist10370904 17139284 11752352 17016423 10907719 9798802 8081071
    ProcyclidineProciclidina [INN-Spanish] (see all 2)77-37-2targetantagonist2027917 17139284 20624420 1426023 17016423 2253700
    PropanthelinePropantheline Bromide (see all 3)298-50-0targetantagonist3572714 2656175 11752352 17016423 15337834 16080359
    Anisotropine Methylbromide-- 80-50-2targetantagonist17139284 4555460 20391952 6897316 17016423
    OxybutyninOxibutinina [INN-Spanish] (see all 10)5633-20-5targetantagonist16406943 17139284 17016423 20590605 17222678
    Cycrimine-- 77-39-4targetantagonist1267542 17139284 11752352 17016423
    Dicyclomine-- 77-19-0targetantagonist17139284 11752352 17016423 19533734
    DoxepinDoxepin Hcl (see all 5)1668-19-5targetantagonist2141000 7855217 19179941 2329499
    EthopropazineAethopropropazin (see all 25)1094-08-2targetantagonist11752352 2904117 17016423 2236897

    10/49 Novoseek chemical compound relationships for CHRM1 gene (see all 49)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    iqnp 82.5 3 7562924 (2)
    oxotremorine m 79.4 3 8263809 (1), 9224827 (1), 11504829 (1)
    xanomeline 78.7 3 9614217 (2), 17977730 (1)
    carbachol 78.3 29 8666061 (2), 8978936 (2), 8239269 (2), 15814109 (2) (see all 20)
    pirenzepine 77.8 13 8905341 (2), 10374898 (2), 9588482 (1), 7663798 (1) (see all 8)
    acetylcholine 71.2 27 7663798 (2), 9121346 (2), 9121347 (1), 7651370 (1) (see all 21)
    oxotremorine 70.7 6 8666061 (2), 2370560 (1), 1578480 (1), 7663798 (1) (see all 5)
    brucine 65.9 2 9224827 (2)
    methoctramine 64.3 4 7663798 (3), 17499370 (1)
    tiotropium 60.2 4 15350163 (2), 10673478 (1), 12768836 (1)

    Search CenterWatch for drugs/clinical trials and news about CHRM1 / ACM1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CHRM1 gene: 
    NM_000738.2  

    Unigene Cluster for CHRM1:

    Cholinergic receptor, muscarinic 1
    Hs.632119  [show with all ESTs]
    Unigene Representative Sequence: NM_000738
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000306960(uc001nwi.3) ENST00000543973 ENST00000536524

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    Additional cDNA sequence: 

    AF385587.1 AF498915.1 AJ006520.1 AK312374.1 BC007740.2 BC022984.1 BT007166.1 

    4 DOTS entries:

    DT.40120991  DT.99947477  DT.97774125  DT.95265990 

    24/47 AceView cDNA sequences (see all 47):

    CB154035 BC022984 NM_000738 AF498915 BX424634 CB154895 BI755888 BC007740 
    AL536991 BI757352 BX280318 CD671895 AJ006520 AI202576 BE261583 BI197683 
    BF315022 BM907142 BT007166 BM805220 BM805611 AI685922 BI753749 BX643235 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CHRM1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCCTCCCAGC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See CHRM1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CHRM1

    SOURCE GeneReport for Unigene cluster: Hs.632119
        SABiosciences Expression via Pathway-Focused PCR Arrays including CHRM1: 
              Neurotransmitter Receptors in human mouse rat
              G Protein Coupled Receptors 384HT in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CHRM1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for CHRM1 gene from 4/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia CHRM16
    --
    61(a)
    1 ↔ 1
    GL344791.1(14835-16301)
    zebrafish
    (Danio rerio)
    Actinopterygii LOC7927081 muscarinic acetylcholine receptor M3-like 59.28(n)
    59.04(a)
      792708  XM_001332257.4  XP_001332293.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta mAcR-60C1 , 3 acetyl choline receptor signaling,
    muscarinic more3
    muscarinic Acetylcholine Receptor 60C1
    55(a)
    (best of 2)3
    63.04(n)1
    57.45(a)1
      60C73
    378921  NM_166668.11  NP_726440.11 
    worm
    (Caenorhabditis elegans)
    Secernentea gar-31 Protein GAR-3 49.79(n)
    44.73(a)
      179962  NM_001029065.1  NP_001024236.1 


    ENSEMBL Gene Tree for CHRM1 (if available)
    TreeFam Gene Tree for CHRM1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CHRM1 gene
    HRH42  CHRM52  HRH12  CHRM22  HRH32  CHRM42  CHRM32  
    15 SIMAP similar genes for CHRM1 using alignment to 4 protein entries:     ACM1_HUMAN (see all proteins):
    DRD2    CHRM4    CHRM2    CHRM3    CHRM5    HTR2B
    HTR2A    HTR2C    HRH3    ADORA2A    HTR5A    SSTR5
    5HT1A    HTR1A    hA2aR

    CHRM1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/219 NCBI SNPs in CHRM1 are shown (see all 219    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs171576281,2
    C,F,H,--62675687(+) TTTTGA/GCCTAA 1 -- ds500125Minor allele frequency- N:0.00NA EA NS CSA WA 2970
    rs1848387791,2
    --62675770(+) CTGTGG/TGGTAA 1 -- ds50010--------
    rs1453207081,2
    --62676055(+) GGCCAC/TGGCCC 1 -- ds50010--------
    rs743374101,2
    C,--62676056(+) GCCACA/GGCCCA 1 -- ds50010--------
    rs1884323561,2
    --62676073(+) AAAGTA/GCTTGG 1 -- ds50010--------
    rs605689771,2
    C,F,--62676215(+) GAACAT/CTNNNN 1 -- ut315Minor allele frequency- C:0.14WA CSA 125
    rs1407438821,2
    --62676600(+) CTGATA/GCTTGG 1 -- ut310--------
    rs1386442791,2
    --62676774(+) TGGCTA/GTGCCC 1 -- ut310--------
    rs118237281,2
    C,F,H,--62676802(+) CACACC/TGCAAT 1 -- ut31 ese317Minor allele frequency- T:0.08NS EA NA WA 2054
    rs1428470861,2
    C,--62676814(+) NNNNCC/TGCTGC 1 -- ut310--------

    HapMap Linkage Disequilibrium report for CHRM1 (62676151 - 62689279 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for CHRM1
         2 CNVs: 0150 47961
    Human Gene Mutation Database (HGMD): CHRM1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHRM1
    DNA2.0 Custom Variant and Variant Library Synthesis for CHRM1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CHRM1 for disorders           About GeneDecksing

    OMIM gene information: 118510    OMIM disorders: --

    20/37 diseases for CHRM1 (see all 37):    About MalaCards
    central nervous system disease    nervous system disease    congenital heart block    attention deficit hyperactivity disorder
    heart block    supranuclear palsy    progressive supranuclear palsy    traumatic brain injury
    brain injury    chronic obstructive pulmonary disease    nicotine dependence    chronic fatigue syndrome
    head injury    neurodegenerative disease    pulmonary disease    vascular dementia
    dementia    sjogren's syndrome    pemphigus    alzheimer's disease

    10/14 Novoseek disease relationships for CHRM1 gene (see all 14)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cognitive disorder 50.5 2 16879488 (1)
    alzheimers disease 49 8 7816331 (3), 9109749 (1), 9869334 (1), 11718746 (1) (see all 5)
    congenital heart block 40.3 4 11247640 (2), 10402042 (2)
    schizophrenia 32 9 10822350 (2), 11384900 (2), 11153542 (1), 18033152 (1) (see all 5)
    lung diseases obstructive 19.9 1 9121347 (1)
    overactive bladder 17.3 2 16879488 (1)
    dementia 15.8 3 15059034 (2), 11718746 (1)
    neurodegenerative diseases 12.2 3 20193677 (1), 15059034 (1)
    glioma 0.592 1 8084514 (1)
    astrocytoma 0 1 1944243 (1)

    Genetic Association Database (GAD): CHRM1
    Human Genome Epidemiology (HuGE) Navigator: CHRM1 (19 documents)

    Export disorders for CHRM1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CHRM1 gene, integrated from 9 sources (see all 333):
    (articles sorted by number of sources associating them with CHRM1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Association analysis for the muscarinic M1 receptor genetic polymorphisms and Alzheimer's disease. (PubMed id 15383745)1, 4 Liu H.C....Tsai S.J. (2005)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Identification of a novel family of G protein-coupled receptor associated sorting proteins. (PubMed id 15086532)1, 2 Simonin F....Kieffer B.L. (2004)
    4. Association of muscarinic m1 receptor genetic polymorphisms with psychiatric symptoms and cognitive function in schizophrenic patients. (PubMed id 14504414)1, 4 Liao D.L....Tsai S.J. (2003)
    5. Mutational analysis of third cytoplasmic loop domains in G-protein coupling of the HM1 muscarinic receptor. (PubMed id 1445347)1, 2 Arden J.R.... Sadee W. (1992)
    6. Isolation of the human ml (Hml) muscarinic acetylcholine receptor gene by PCR amplification. (PubMed id 2336407)1, 2 Chapman C.G. and Browne M.J. (1990)
    7. Distinct primary structures, ligand-binding properties and tissue- specific expression of four human muscarinic acetylcholine receptors. (PubMed id 3443095)1, 2 Peralta E.G....Capon D.J. (1987)
    8. Sequence of the gene encoding the human M1 muscarinic acetylcholine receptor. (PubMed id 3697105)1, 2 Allard W.J.... Dixon R.A.F. (1987)
    9. The presence of m1 to m5 receptors in human sclera: evidence of the sclera as a potential site of action for muscarinic receptor antagonists. (PubMed id 16877267)1, 9 Qu J....Lu F. (2006)
    10. Gene-based analysis suggests association of the nicotinic acetylcholine receptor beta1 subunit (CHRNB1) and M1 muscarinic acetylcholine receptor (CHRM1) with vulnerability for nicotine dependence. (PubMed id 16874522)1, 9 Lou X.Y....Li M.D. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 1128 HGNC: 1950 AceView: CHRM1 Ensembl:ENSG00000168539 euGenes: HUgn1128
    ECgene: CHRM1 Kegg: 1128 H-InvDB: CHRM1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CHRM1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CHRM1 gene:
    Search GeneIP for patents involving CHRM1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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