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CHORDC2P Gene(Pseudogene)

Cysteine And Histidine Rich Domain Containing 2, Pseudogene

GCID:
GC14M091092
GIFtS:
16
Genes Participants
UDN Logo

Aliases for CHORDC2P Gene

Aliases for CHORDC2P Gene

  • Cysteine And Histidine Rich Domain Containing 2, Pseudogene 2 3 5
  • Cysteine And Histidine-Rich Domain (CHORD)-Containing 2 Pseudogene 2
  • Cysteine And Histidine-Rich Domain (CHORD) Containing 2 Pseudogene 2

External Ids for CHORDC2P Gene

Previous GeneCards Identifiers for CHORDC2P Gene

  • GC14U900028
  • GC14M088192
  • GC14M089272
  • GC14M090201
  • GC14M089803
  • GC14M090064
  • GC14M090202
  • GC14M090496
  • GC14M090817

Summaries for CHORDC2P Gene

GeneCards Summary for CHORDC2P Gene

CHORDC2P (Cysteine And Histidine Rich Domain Containing 2, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHORDC2P Gene

Genomics for CHORDC2P Gene

Products:

  1. Regulatory Element

Regulatory Elements for CHORDC2P Gene

Enhancers for CHORDC2P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G089718 1.3 FANTOM5 Ensembl ENCODE 0.4 +17.4 17430 4.4 CTCF ZNF146 RFX1 BHLHE40 MAX ATF2 CTBP2 CREB1 FOS ETV6 FOXN3 ENSG00000252655 RN7SKP107 TDP1 RN7SKP255 CHORDC2P
GH14G089772 1.3 FANTOM5 Ensembl ENCODE 0.3 -35.3 -35250 1.6 CTCF TFAP4 SAP130 BACH1 RBBP5 THRB ZNF48 ZSCAN9 ZNF766 CBX5 ENSG00000252655 FOXN3 TDP1 CHORDC2P PIR58103
GH14G089740 0.5 ENCODE 0.7 -1.9 -1930 0.2 CTBP1 GATA3 CUX1 DPF2 FOXA1 CHORDC2P PIR58103
GH14G089723 0.8 Ensembl ENCODE 0.4 +13.8 13754 1.5 CTCF HNF4A RAD21 FOXA1 RN7SKP107 FOXN3 ENSG00000252655 RN7SKP255 CHORDC2P
GH14G089768 1 Ensembl ENCODE 0.3 -29.6 -29559 0.4 CTCF SAP130 ARID4B RAD21 ZBTB40 ARID3A CBX5 SMC3 MIXL1 ZNF654 RN7SKP107 FOXN3 ENSG00000252655 CHORDC2P PIR58103
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CHORDC2P on UCSC Golden Path with GeneCards custom track

Genomic Location for CHORDC2P Gene

Chromosome:
14
Start:
89,734,678 bp from pter
End:
89,738,442 bp from pter
Size:
3,765 bases
Orientation:
Minus strand

Genomic View for CHORDC2P Gene

Genes around CHORDC2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHORDC2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHORDC2P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CHORDC2P Gene

Proteins for CHORDC2P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CHORDC2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHORDC2P Gene

Domains & Families for CHORDC2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHORDC2P Gene

Function for CHORDC2P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHORDC2P Gene

Localization for CHORDC2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CHORDC2P Gene

Pathways & Interactions for CHORDC2P Gene

SuperPathways for CHORDC2P Gene

PathCards logo More details on SuperPathways for CHORDC2P
No Data Available

Interacting Proteins for CHORDC2P Gene

Gene Ontology (GO) - Biological Process for CHORDC2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHORDC2P Gene

Drugs & Compounds for CHORDC2P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CHORDC2P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for CHORDC2P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CHORDC2P Gene

No ASD Table

Relevant External Links for CHORDC2P Gene

GeneLoc Exon Structure for
CHORDC2P
ECgene alternative splicing isoforms for
CHORDC2P

Expression for CHORDC2P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHORDC2P Gene

mRNA expression in normal human tissues for CHORDC2P Gene
mRNA expression by GTEx for CHORDC2P Gene

mRNA differential expression in normal tissues according to GTEx for CHORDC2P Gene

This gene is overexpressed in Brain - Hippocampus (x5.4), Brain - Amygdala (x5.3), Brain - Substantia nigra (x5.0), Brain - Cerebellar Hemisphere (x4.7), Brain - Caudate (basal ganglia) (x4.7), Brain - Putamen (basal ganglia) (x4.2), and Testis (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of CHORDC2P Gene:

CHORDC2P
genes like me logo Genes that share expression patterns with CHORDC2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHORDC2P Gene

Orthologs for CHORDC2P Gene

Evolution for CHORDC2P Gene

ENSEMBL:
Gene Tree for CHORDC2P (if available)
TreeFam:
Gene Tree for CHORDC2P (if available)

No data available for Orthologs for CHORDC2P Gene

Paralogs for CHORDC2P Gene

No data available for Paralogs for CHORDC2P Gene

Variants for CHORDC2P Gene

Relevant External Links for CHORDC2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHORDC2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHORDC2P Gene

Disorders for CHORDC2P Gene

Relevant External Links for CHORDC2P

Genetic Association Database (GAD)
CHORDC2P

No disorders were found for CHORDC2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CHORDC2P Gene

Publications for CHORDC2P Gene

  1. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C. … Larson M.G. (BMC Med. Genet. 2007) 46 64

Products for CHORDC2P Gene

Sources for CHORDC2P Gene

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