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Aliases for CHODL-AS1 Gene

Subcategory (RNA class) for CHODL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CHODL-AS1 Gene

  • CHODL Antisense RNA 1 2 3 5
  • CHODL Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 21 Open Reading Frame 39 2
  • Non-Protein Coding RNA 157 2
  • NCRNA00157 3
  • C21orf39 3

External Ids for CHODL-AS1 Gene

Previous HGNC Symbols for CHODL-AS1 Gene

  • C21orf39
  • NCRNA00157

Previous GeneCards Identifiers for CHODL-AS1 Gene

  • GC21M019208

Summaries for CHODL-AS1 Gene

GeneCards Summary for CHODL-AS1 Gene

CHODL-AS1 (CHODL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHODL-AS1 Gene

Genomics for CHODL-AS1 Gene

Regulatory Elements for CHODL-AS1 Gene

Enhancers for CHODL-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CHODL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CHODL-AS1 Gene

Chromosome:
21
Start:
17,835,016 bp from pter
End:
17,885,608 bp from pter
Size:
50,593 bases
Orientation:
Minus strand

Genomic View for CHODL-AS1 Gene

Genes around CHODL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHODL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHODL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHODL-AS1 Gene

Proteins for CHODL-AS1 Gene

Post-translational modifications for CHODL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHODL-AS1 Gene

Domains & Families for CHODL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHODL-AS1 Gene

Function for CHODL-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHODL-AS1 Gene

Localization for CHODL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CHODL-AS1 Gene

Pathways & Interactions for CHODL-AS1 Gene

SuperPathways for CHODL-AS1 Gene

No Data Available

Interacting Proteins for CHODL-AS1 Gene

Gene Ontology (GO) - Biological Process for CHODL-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHODL-AS1 Gene

Drugs & Compounds for CHODL-AS1 Gene

No Compound Related Data Available

Transcripts for CHODL-AS1 Gene

mRNA/cDNA for CHODL-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CHODL-AS1 Gene

CHODL antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CHODL-AS1 Gene

No ASD Table

Relevant External Links for CHODL-AS1 Gene

GeneLoc Exon Structure for
CHODL-AS1
ECgene alternative splicing isoforms for
CHODL-AS1

Expression for CHODL-AS1 Gene

mRNA expression in normal human tissues for CHODL-AS1 Gene

SOURCE GeneReport for Unigene cluster for CHODL-AS1 Gene Hs.404306

genes like me logo Genes that share expression patterns with CHODL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CHODL-AS1 Gene

Orthologs for CHODL-AS1 Gene

Evolution for CHODL-AS1 Gene

ENSEMBL:
Gene Tree for CHODL-AS1 (if available)
TreeFam:
Gene Tree for CHODL-AS1 (if available)

No data available for Orthologs for CHODL-AS1 Gene

Paralogs for CHODL-AS1 Gene

No data available for Paralogs for CHODL-AS1 Gene

Variants for CHODL-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for CHODL-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv834055 CNV Gain 17160897
nsv522920 CNV Loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for CHODL-AS1 Gene

Disorders for CHODL-AS1 Gene

Relevant External Links for CHODL-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CHODL-AS1

No disorders were found for CHODL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CHODL-AS1 Gene

Publications for CHODL-AS1 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 67
  2. [IMAGE: molecular integration of the analysis of the human genome and its expression]. (PMID: 7757816) Auffray C. … Lamy B. (C. R. Acad. Sci. III, Sci. Vie 1995) 3

Products for CHODL-AS1 Gene

Sources for CHODL-AS1 Gene

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